Ggra6610.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6610.t1
Unique NameGgra6610.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length822
Homology
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A2V3J4T6 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4T6_9FLOR)

HSP 1 Score: 823 bits (2125), Expect = 1.380e-288
Identity = 464/822 (56.45%), Postives = 568/822 (69.10%), Query Frame = 0
Query:    1 MRGFKQENVPLPPRVLQHPQSWRLERWLVKPASWVHREQRIATFRSLQNAALEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASIEFCPHSVVFKGICAVCGETAQSLHFAETKNTIERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADADLQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYDRAISLFGYRNVEGKRQKVSNLPSKTLNEASAGANQDEKEHTIKLDASKPSENGNEVKQTNGIIADFETQSKERQESALPLKADQNGVFSVKVNRPVSPDVV-PNATPEDNSEHVVDMQVVGVALNGDSKAKQQNGSSPGQAKPDRLEKLEDEEGSNQTRDQQTCSSKGGTPLRNVPPNGVVVEKVETLSHNTV-ERKATDNVEGHHLSQQNQEPQNGSYKEESTMQPASSNRALTGKNAFFSGIFSELVSKWWAKDVNPKVANHLPRLADVLENCHARFFSIADQARKASGAVHNGPTKRFRPPADVKKILAGCRREVLRDCVVSFTGVIPTGVDPHNSELWNLAQRLGAQCSLDFENGHTTHLVTSEARGYYTRKYKQAVENGSAFVVSPSWLEHSAFHFERQDEFEYRVDSDDRFKTSEEFKSWVNDNYAKAASACRKRSAAQMNDKQLGDERTPKRRKLDSPS--PSVRGSGSRSPVADVGMLSVLSQDEIGAAIEAAF 818
            MRG+KQE+V LP RVLQ P  WRL+RWLV  ++ VHREQR+ATF+SL   A+EYA APRSGK+V   +QQ++ VD   + LA IEFC H+VVFKGICA+CGETAQSLHFAETK  +ERIPVAY+S QLAVSRAEAES +SVNAR+LL S+RLSLVLDLDHTL+HATDD RAP+ I  FP DADL SVKAF L   ++P     MHVKLRPHL  FL RLS KFELHIYTMGTR YA QIA++IDP KKLFGGRITSREDF EGR NQKSIQRLFPCDDSMVLIVDDREDVWIS+TGQSFMPNLIRA+PYHFWDGLHE YDR  +  G  + +      ++  SK+L + +    + E   TI  +A     N    + TNG +A     S+E   +  P  A  +   ++       PD   P + P+ N            A NG S  + Q             E++ D +GS+            GT       NG   +  E   H+T     A D+     L  ++    N     ES +  AS  R L       S +FSELV+ WW +D +PK +NHL +LA+VLE CH+RFFSIA QA++ SGAV+ GP KRFRPPADVK+ILA  RREVL++CVV FTGVIPTGVDPH+S  W+LA+RLGAQCSL++ENGHTTHLVTSE RG  TRKYKQA+E+G+A+V+SP+WL+ SA  FERQDEF+Y++D DDRFK+S +++SW+N+N+AKAAS+CRKR+  Q+ + Q G   + KRRK+DSPS   S+RGS  RSP+AD GM+SVL+ DEIGAAIEAAF
Sbjct:    1 MRGYKQEHVQLPERVLQQPAQWRLDRWLVNNSASVHREQRLATFKSLSTGAVEYAFAPRSGKIVKTFIQQSSTVDPAASALALIEFCTHAVVFKGICAICGETAQSLHFAETKTAVERIPVAYDSNQLAVSRAEAESIASVNARNLLHSQRLSLVLDLDHTLVHATDDPRAPQVINHFPPDADLHSVKAFALAPVIHPNAPPLMHVKLRPHLFEFLHRLSNKFELHIYTMGTRPYADQIANLIDPHKKLFGGRITSREDFEEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISSTGQSFMPNLIRADPYHFWDGLHEAYDRVSATNGRLSTKSNAVGTTDT-SKSLLKPNENDTEKEAPRTINGNALHVIHN---TEYTNGTLAASGIDSEE-DNTRTPTSASASPDTAL-------PDAESPASEPQTN------------AFNGVSADRAQQ------------ERVHDGDGSSXXXXXXXXXXXDGT-FDGKRGNGFAEQAKE---HSTPGNATAADDTPPASLLDEHSPVPN-----ESAIPDASGTRTLCENADSSSTLFSELVNSWWKQDADPKASNHLLKLAEVLEECHSRFFSIASQAQRESGAVNKGPAKRFRPPADVKRILASVRREVLQECVVCFTGVIPTGVDPHSSPYWSLAKRLGAQCSLEYENGHTTHLVTSETRGRNTRKYKQAMESGAAYVISPAWLDDSAVRFERQDEFDYQLDKDDRFKSSNDYRSWINNNFAKAASSCRKRNVTQLYENQAGAAGSAKRRKVDSPSRNSSLRGSECRSPMAD-GMVSVLTADEIGAAIEAAF 776          
BLAST of Ggra6610.t1 vs. uniprot
Match: R7QQX4 (Protein-serine/threonine phosphatase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQX4_CHOCR)

HSP 1 Score: 316 bits (809), Expect = 2.520e-94
Identity = 220/632 (34.81%), Postives = 300/632 (47.47%), Query Frame = 0
Query:  204 MHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYDRAISLFGYRNVEGKRQKVSNLPSKTLNEASAGANQDEKEH--------TIKLDASKPSENGNEVKQTNGIIADFETQSKERQESAL----PLKADQNGVFSVKVNRPVSPDVVPNA--TPEDNSEHVVDMQVVGVALNGDSKAKQQNGSSPGQAKPDRLEKLEDEEGSNQTRDQQTCSSKGGTPLRNVPPNGVVVEKVETLSHNTVERKATDNVEGHHLSQQNQEPQNGSYKEESTMQPASSNRALTGKNAFFSGIFSELVSKWWAKDVNPKVANHLPRLADVLENCHARFFSIADQARKASGAVHNGPTKRFRPPADVKKILAGCRREVLRDCVVSFTGVIPTGVDPHNSELWNLAQRLGAQCSLDFENGHTTHLVTSEARGYYTRKYKQAVENGSAFVVSPSWLEHSAFHFERQDEFEYRVDSDDRFKTSEEFKSWVNDNYAKAASACRKRSAAQMNDKQLGDE---RTPKRRKLDSPSPSVRGSGSRSPVADVGMLSVLSQDEIGAAIEAAF 818
            MH+K+RP+L HFL+ L  KF LHIYTMG+R YA ++A +IDP+ + FGGRITSREDF EG  NQK+IQRLFPCDDSM LIVDDREDVW+S + Q +MPNL+RA+PYHFW G+HE YDR               +  N  +  L +  +G + D  +         T   D +    NGN++        D        Q + L    P +AD         +   S DV  N+   PED +  V+                           P +LE           R  QT     GT            E  + LS   +    TD    H    +  E +NG     S      S  A   +       F  +   WW  D +PK  +HL RLA VLE+CH  FF      +  +G       ++F+ PADVK IL+  R++VL  CV++F+G+ P    P     WNLA RLGA CS +F +G TTH++TS  R   T+K   A+ +G+A+VV+  W+E  A +FERQ+E  Y   +   F   E+F+ +V     KAA A RKR   ++ D+  G+E     P ++   S    V              + +LS DEIG  +E  F
Sbjct:    1 MHLKVRPNLNHFLETLRVKFNLHIYTMGSRLYADRVAKLIDPDNRFFGGRITSREDFPEGNCNQKNIQRLFPCDDSMALIVDDREDVWLSDSTQPYMPNLLRAQPYHFWVGMHEAYDRVAP-----------PEHHNPTAHQLADKPSGGSTDNTQQPPAVQGTLTTNSDNTTTIGNGNDISNHRHANLDSPANDSPFQPTGLKVQQPEEADARHAEGGMESPNYSNDVAKNSPTAPEDTAITVLS--------------------------PPQLE----------LRPSQTVGPSEGTV------GAATSEPEKQLSATNIHE--TDRTNAHDHETKESEQENGDTSARSIKPDGHSGEATNVEK------FRSIAKGWWETDSSPKSRSHLLRLAQVLEDCHKEFFDRCKSRKAHNGVEAQSAGQQFQSPADVKDILSEFRKKVLAGCVLTFSGLKPRKDAPETVPEWNLALRLGASCSSEFVHGRTTHVITSLKRVPDTQKCMDAMHSGTAYVVTTDWVEDCALNFERQNELAYCESAQQMFDDGEKFRDYVETRREKAAQALRKRGREEL-DEIYGNEVVGTIPWKKSRVSEEMDVMDDTGLEGTNGTAAVRILSHDEIGEVMEDLF 570          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A7S3A5N5 (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N5_9RHOD)

HSP 1 Score: 280 bits (717), Expect = 1.810e-82
Identity = 175/414 (42.27%), Postives = 232/414 (56.04%), Query Frame = 0
Query:    8 NVPLPPRVLQHPQSWRLERWLVKPASWVHREQRIATFRSLQNAALEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASIEFCPHSVVFKGICAVCGETAQSLHFAETKNTIERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADADLQSVK----AFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYDRAISLFGYRNVEGKRQKVSNLPS--KTLNEASAGANQDEKE-HTIKLDASKPSENGNEVKQTNGIIADFETQSKERQESALPLKADQNGVFSVKVNR 414
             V  P     +  S +L +WLV+    V    RIAT      + L+   APR G +V + ++    +     P+ SI+FC H+V+F G+C +CG     +HF++   + +R+ VAYES  L VSR EA    +  ARHLL+ R LSLVLDLDHTLLHATDD RA   +                 A H G      +     VKLRP L +FL+R+ KKFELHIYTMGTR YA  IA+IIDPE+ LFG R+TSR+DF EG LNQK+++R+FPCDD+MVLIVDDREDVW+     S MPNLI+A PYHF+ GLHE YDR  S        G   K   +PS  K +   +AG +   KE H ++   S P   G         + ++     E  E+A P   ++    ++K+NR
Sbjct:    5 EVRAPKSSFANGSSAKLVKWLVREGEEVDEGTRIATVEKANASKLDVL-APRCGTMVGVGVKIGEELKEN-VPICSIQFCTHAVIFGGLCTICGRDLSMVHFSQDVPSAQRVNVAYESG-LVVSRDEARRTETDKARHLLDRRLLSLVLDLDHTLLHATDDPRAKAALIMDDQSPQTPGTPMLSPAHHRGIHQLVLDGKSFFVKLRPGLGNFLRRMKKKFELHIYTMGTRPYADSIAAIIDPERTLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SRMPNLIKARPYHFFKGLHEAYDRT-SKAPIETGGGGLAKKKAIPSEEKPVPSKAAGDSTSTKENHNLENSPSDPPAKG---------VHEYAKSCPEASEAANPSTEEKKTPEALKINR 404          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A7S0ZJJ3 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJJ3_9RHOD)

HSP 1 Score: 238 bits (607), Expect = 1.190e-64
Identity = 143/384 (37.24%), Postives = 207/384 (53.91%), Query Frame = 0
Query:    9 VPLPPRVLQHPQS----WRLERWLVKPASWVHREQRIATF-----RSLQNAALEY-AHAPRSGKLVNLTLQQNAPVDSTKTPLASIEFCPHSVVFKGICAVCGE-----------------------------------TAQSLHFAETKNTIE---RIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADADLQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYDRAISLFGYRNVEGKRQKVSNLPSK 344
            V +P   L   QS    W+L +WLV P S V   Q +A        S  +++L+    AP +GKL+   ++    +    +P++ +EFCPH++++ G+CAVCGE                                   + + L   E K + +   R+ VAY   +L+VSR EAES S   A  ++  RRL LVLD+DHTLLHA  D RA   I   P     + + +F +        +  M++K RP L  FL R+  KFELHIYT G R+YA  +A ++DP+ +LF GR+ SR+DF EG L+QK+++R+FPCDDSMVLIVDDREDVW  +   +++PNL+   PY F+ G++EVYDR   +    NV    +    +P K
Sbjct:    6 VYIPEAALTASQSRRGRWKLAQWLVDPNSKVITGQSVAKIVFVPELSDNSSSLDMLVKAPHNGKLLTHLVKPQQHIHDMSSPISCVEFCPHAIIYAGLCAVCGEHDPVQLTQASTPARPPSLLLDTNTSAVNNSQTASQSQEKLSSTENKKSFKPQARVDVAYAGGELSVSRNEAESMSKRIASRMMRERRLFLVLDIDHTLLHAMCDSRAASAIPLLPEHVS-KDIHSFLMAPDGFTAPAQTMYLKFRPSLMDFLNRMKSKFELHIYTNGRRAYANAVARVLDPQHELFRGRVVSRDDFPEGALSQKNLRRVFPCDDSMVLIVDDREDVWGQSV-DTYLPNLLLVTPYWFFRGVNEVYDRTQPVLNAVNVPSVTKNAEAVPFK 387          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A7S0G191 (RNA polymerase II subunit A C-terminal domain phosphatase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G191_9RHOD)

HSP 1 Score: 211 bits (536), Expect = 9.830e-60
Identity = 114/189 (60.32%), Postives = 134/189 (70.90%), Query Frame = 0
Query:  143 ARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADADLQSVK---------AFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYDRA 322
            AR+LL+ R LSLVLDLDHTLLHATDD RA   +       D QS K         A+H G      +     VKLRP L +FL+R+  KFELHIYTMGTRSYA  IA+IIDPE+KLFG R+TSR+DF EG LNQK+++R+FPCDD+MVLIVDDREDVW+     S MPNLI+A PYHF+ GLHE YDR 
Sbjct:    1 ARYLLDRRLLSLVLDLDHTLLHATDDPRAKAALMM-----DDQSPKTPGTPMLSPAYHKGIHPLALDGQSFFVKLRPGLGNFLRRMKNKFELHIYTMGTRSYADSIAAIIDPERKLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SKMPNLIKARPYHFFKGLHEAYDRT 183          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A5J4YY12 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY12_PORPP)

HSP 1 Score: 222 bits (565), Expect = 8.130e-58
Identity = 151/357 (42.30%), Postives = 186/357 (52.10%), Query Frame = 0
Query:   18 HPQSWRLERWLVKPASWVHREQRIATFRS---------LQNAALEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASIEFCPHSVVFKGICAVCGETAQSL-----HFAETKNTI-----ERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPA------DADLQSVKAFHLGTG--LNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWIS--ATGQSF-------------------MPNLIRAEPYHFWDGLHEVYDRAISLF 326
            H   W+L +W V     V     +A  R+         L +  +    A R G + +L + +    D     LA+IE+C H+V++ GIC  CGE            A T N       ER+ VAY  E L+V+  EA       AR +   RRL LVLDLDHTLLHA++D  A   +    A      D   QS  A  + T   L       M+VKLRP LA FL RL KKFELHIYTMGTR+YA  IA IIDP KK F GRI SREDF EG LNQK+++R+FPCDDSMVLIVDDR+DVW +  A+ QS                    + NLI+A PY F+ GL E YDR    F
Sbjct:  206 HSAGWKLLKWFVVAGQSVSVGNVLARVRAQHHDRAAAPLPSTRVVELVATRKGVIKSLDVDEGQCFDDHACVLAAIEYCAHAVIYGGICTTCGEEQDDTKNRRRRMAATLNLTGGADGERLDVAYAGE-LSVTYKEAVEVGKKAARRMRSERRLYLVLDLDHTLLHASNDPNARAALGADDAPCGHKTDWIKQSPHASDIHTFPILGGAVQETMYVKLRPGLAEFLSRLVKKFELHIYTMGTRAYADAIARIIDPTKKFFQGRIVSREDFKEGALNQKNLRRVFPCDDSMVLIVDDRDDVWCADVASAQSTSRSSNVLGRSAQFKVPQEPIENLIQASPYAFFSGLEEAYDRTAQGF 561          
BLAST of Ggra6610.t1 vs. uniprot
Match: S9PZR4 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9PZR4_SCHOY)

HSP 1 Score: 191 bits (484), Expect = 1.630e-47
Identity = 111/272 (40.81%), Postives = 165/272 (60.66%), Query Frame = 0
Query:   52 LEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASI-EFCPHSVVFKGICAVCGETAQSLHFAETKNTIE-RIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADAD---LQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEV 318
            +E    P  G+LV   ++ +  +DS    +A + E C H V + G+CA+CGE   S  +    +     I + +++  L VS  EA      N   L   RRLSL++DLD T++HAT D    E+++  P++A+   L+ V++F+L  G   T S+R ++KLRP L  FL R+S  +ELHIYTMGT++YA +IA +IDPE K+F  R+ SR+D   G L QKS+QRLFPCD SMV+I+DDR D+W       + PNLI+  P+ F+ G+ ++
Sbjct:   63 IEQFECPVEGELVQWEVKNDEQLDSNLKVIAKLHEPCTHEVHYGGLCAICGENITSQDYMGYSDMARANISMTHDTGGLTVSLDEANRIEEQNVIRLRNERRLSLIVDLDQTIIHATVDPTVGEWMSD-PSNANYHLLKDVRSFYLQEGFR-TYSSRYYIKLRPGLQEFLARISNMYELHIYTMGTKAYAKEIAKLIDPEGKIFQDRVLSRDD--SGSLTQKSLQRLFPCDTSMVVIIDDRGDIW------DWNPNLIKVVPFEFFVGIGDI 324          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A8H7SF44 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SF44_9FUNG)

HSP 1 Score: 188 bits (478), Expect = 6.540e-47
Identity = 108/237 (45.57%), Postives = 148/237 (62.45%), Query Frame = 0
Query:   87 CPHSVVFKGICAVCGETAQSLHFAETKNTIERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFI-----ACFPADADLQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEV 318
            C H V F G+CA+CG   ++       NT   I +++++  L VSR EAE     NA  LLE R+LSL+LDLD T++HAT D    +++        PA  D   ++ F L     P +S   ++KLRP L+ FL+++S+K+ELHIYTMGTR YA  +A  IDPE KLF GRI SR++   G + QK IQRLFPCD SMV+++DDR DVW      SF PNLI+ +PY F+ G+ ++
Sbjct:    3 CTHEVQFNGLCALCGAVLET-----NDNTKTHINMSHDNMGLTVSRQEAERLEHENAERLLEDRKLSLILDLDQTVVHATWDPTVGDWMRDENNTNHPATKD---IRKFTL-----PGSSLMYYIKLRPGLSEFLRKVSEKYELHIYTMGTRHYAEAVAREIDPEDKLFRGRILSRDE--SGSVTQKKIQRLFPCDTSMVVVLDDRSDVW------SFSPNLIKIKPYEFFVGIGDI 218          
BLAST of Ggra6610.t1 vs. uniprot
Match: S9W3E1 (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) TaxID=653667 RepID=S9W3E1_SCHCR)

HSP 1 Score: 189 bits (479), Expect = 7.850e-47
Identity = 113/289 (39.10%), Postives = 170/289 (58.82%), Query Frame = 0
Query:   35 VHREQRIATFRSLQNAALEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASI-EFCPHSVVFKGICAVCGETAQSLHFAETKN-TIERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFIACFPADAD---LQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEV 318
            V  +Q   T   +    +E    P  GKLV   ++ +  +++    +A + E C H V + G+CA+CGE   S  +    + T   I + +++  L VS  EA      N   L + RRLSL++DLD T++HAT D    E+++  P++ +   L+ V++F+L  G   T S+  ++KLRP L  FL R+S  +ELHIYTMGT++YA +IA IIDPE K+F  R+ SR+D   G L QKS+QRLFPCD SMV+I+DDR D+W       + PNLI+  P+ F+ G+ ++
Sbjct:   46 VKEDQEDGTEEYVDREFIEQFECPVEGKLVEWEVENDEQLENNLKVVAKLHEPCTHEVHYGGLCAICGENITSQDYMGYSDMTRANISMTHDTGGLTVSLDEASRIEEQNVSRLRKERRLSLIVDLDQTIIHATVDPTVGEWMSD-PSNVNYHLLKDVRSFYLQEGYR-TYSSCYYIKLRPGLQEFLTRISSMYELHIYTMGTKAYAKEIAKIIDPEGKVFQDRVLSRDD--SGSLTQKSLQRLFPCDTSMVVIIDDRGDIW------DWNPNLIKVVPFEFFVGIGDI 324          
BLAST of Ggra6610.t1 vs. uniprot
Match: A0A077WXT6 (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WXT6_9FUNG)

HSP 1 Score: 187 bits (474), Expect = 1.520e-46
Identity = 111/240 (46.25%), Postives = 151/240 (62.92%), Query Frame = 0
Query:   84 IEFCPHSVVFKGICAVCGETAQSLHFAETKNTIERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDIRAPEFI-----ACFPADADLQSVKAFHLGTGLNPTNSARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLFGGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEV 318
            +E C H V F G+CAVCG+   +L  AE+    + I +++ +  L VSR EAE     NA  L+E R+LSL+LDLD T++HAT D    E++     A  PA  D   ++ F L     P +S   ++KLRP L+ FL+++SK +ELHIYTMGTR YA  +A  IDPE KLF  RI SR++   G + QK IQRLFPCD SMV+++DDR DVW      SF PNLI+ +PY F+ G+ ++
Sbjct:    1 MEECTHEVQFHGMCAVCGK---NLDKAESSK--DNINMSHNTTGLTVSRKEAERLEQENAARLMEERKLSLILDLDQTVVHATWDPTVGEWMKDENNANHPATKD---IRKFTL-----PGSSLMYYIKLRPGLSEFLEQVSKLYELHIYTMGTRHYAEAVAREIDPEDKLFRDRILSRDE--SGSMTQKKIQRLFPCDTSMVVVLDDRSDVW------SFSPNLIKVKPYEFFVGIGDI 219          
The following BLAST results are available for this feature:
BLAST of Ggra6610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4T61.380e-28856.45RNA polymerase II subunit A C-terminal domain phos... [more]
R7QQX42.520e-9434.81Protein-serine/threonine phosphatase n=1 Tax=Chond... [more]
A0A7S3A5N51.810e-8242.27RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0ZJJ31.190e-6437.24RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0G1919.830e-6060.32RNA polymerase II subunit A C-terminal domain phos... [more]
A0A5J4YY128.130e-5842.30RNA polymerase II subunit A C-terminal domain phos... [more]
S9PZR41.630e-4740.81RNA polymerase II subunit A C-terminal domain phos... [more]
A0A8H7SF446.540e-4745.57RNA polymerase II subunit A C-terminal domain phos... [more]
S9W3E17.850e-4739.10RNA polymerase II subunit A C-terminal domain phos... [more]
A0A077WXT61.520e-4646.25RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 150..314
e-value: 1.4E-35
score: 134.2
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 153..309
e-value: 2.2E-24
score: 86.0
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 147..329
score: 30.460117
IPR011947FCP1-like phosphatase, phosphatase domainTIGRFAMTIGR02250TIGR02250coord: 146..311
e-value: 2.9E-45
score: 152.2
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 656..711
e-value: 1.8E-6
score: 27.8
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 632..729
score: 11.9486
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 137..350
e-value: 1.2E-50
score: 174.0
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 636..729
e-value: 8.9E-21
score: 76.0
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 636..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..783
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 761..795
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..400
NoneNo IPR availablePANTHERPTHR23081:SF0RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEcoord: 80..733
NoneNo IPR availableCDDcd07521HAD_FCP1-likecoord: 151..291
e-value: 9.14278E-34
score: 124.245
NoneNo IPR availableCDDcd17729BRCT_CTDP1coord: 624..724
e-value: 1.23324E-35
score: 128.034
IPR039189CTD phosphatase Fcp1PANTHERPTHR23081RNA POLYMERASE II CTD PHOSPHATASEcoord: 80..733
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 145..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:565039..567504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6610.t1Ggra6610.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 565039..567504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6610.t1 ID=Ggra6610.t1|Name=Ggra6610.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=822bp
MRGFKQENVPLPPRVLQHPQSWRLERWLVKPASWVHREQRIATFRSLQNA
ALEYAHAPRSGKLVNLTLQQNAPVDSTKTPLASIEFCPHSVVFKGICAVC
GETAQSLHFAETKNTIERIPVAYESEQLAVSRAEAESRSSVNARHLLESR
RLSLVLDLDHTLLHATDDIRAPEFIACFPADADLQSVKAFHLGTGLNPTN
SARMHVKLRPHLAHFLQRLSKKFELHIYTMGTRSYAAQIASIIDPEKKLF
GGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFM
PNLIRAEPYHFWDGLHEVYDRAISLFGYRNVEGKRQKVSNLPSKTLNEAS
AGANQDEKEHTIKLDASKPSENGNEVKQTNGIIADFETQSKERQESALPL
KADQNGVFSVKVNRPVSPDVVPNATPEDNSEHVVDMQVVGVALNGDSKAK
QQNGSSPGQAKPDRLEKLEDEEGSNQTRDQQTCSSKGGTPLRNVPPNGVV
VEKVETLSHNTVERKATDNVEGHHLSQQNQEPQNGSYKEESTMQPASSNR
ALTGKNAFFSGIFSELVSKWWAKDVNPKVANHLPRLADVLENCHARFFSI
ADQARKASGAVHNGPTKRFRPPADVKKILAGCRREVLRDCVVSFTGVIPT
GVDPHNSELWNLAQRLGAQCSLDFENGHTTHLVTSEARGYYTRKYKQAVE
NGSAFVVSPSWLEHSAFHFERQDEFEYRVDSDDRFKTSEEFKSWVNDNYA
KAASACRKRSAAQMNDKQLGDERTPKRRKLDSPSPSVRGSGSRSPVADVG
MLSVLSQDEIGAAIEAAFSAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004274FCP1_dom
IPR011947FCP1_euk
IPR001357BRCT_dom
IPR023214HAD_sf
IPR036420BRCT_dom_sf
IPR039189Fcp1
IPR036412HAD-like_sf