Ggra6595.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A2V3J3X6 (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X6_9FLOR) HSP 1 Score: 346 bits (888), Expect = 9.250e-120 Identity = 156/182 (85.71%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 35 MAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILPKL 216
MAEKSPSVPFMD P+ L+PDM GYVGFDPFNIS+++N+KWLQEAEIKHARICLLAILG +VAEVYQFPWY DYPH+V+YRHNWAV+NGSL+QILLWCSFFEIMTMPAVTQM+TG+SDR+PGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAM+A+SGAIHHAA++NQNL+EQL +GNILPKL
Sbjct: 1 MAEKSPSVPFMDAPSRLTPDMAGYVGFDPFNISAFLNVKWLQEAEIKHARICLLAILGFMVAEVYQFPWYSDYPHVVIYRHNWAVTNGSLSQILLWCSFFEIMTMPAVTQMVTGRSDREPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMIAVSGAIHHAAVTNQNLIEQLTAGNILPKL 182
BLAST of Ggra6595.t1 vs. uniprot
Match: R7QQW5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQW5_CHOCR) HSP 1 Score: 314 bits (804), Expect = 1.960e-106 Identity = 149/214 (69.63%), Postives = 172/214 (80.37%), Query Frame = 0
Query: 1 MAFISSFVPSFAGVRATFGARVCAASRRGASAVVMAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
MAF+ SF A GA+V AA + V M KSPSVPFMDVPA LSPDMPGYVGFDP NIS Y+N+K+LQEAEIKH R+CLLAILG IVAEVYQFPWYK+YPHLV+ RHNW V+NGS+ Q+L+W SF+EIMT PA QM+ G+SDR+PG F FDPLGLGK+P KLA YKVNEIKNGRLAM+A+SGAIHHAAIS QN+ EQ+ SG +LP
Sbjct: 2 MAFVGSFTAPALSRNAFAGAKVSAAPSHVVARVSMQTKSPSVPFMDVPANLSPDMPGYVGFDPLNISDYLNVKFLQEAEIKHCRVCLLAILGMIVAEVYQFPWYKEYPHLVIDRHNWGVTNGSMLQLLIWISFWEIMTTPATIQMVNGQSDREPGYFGFDPLGLGKNPDKLATYKVNEIKNGRLAMIAVSGAIHHAAISQQNMFEQITSGGLLP 215
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A5J4YYC4 (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYC4_PORPP) HSP 1 Score: 212 bits (539), Expect = 3.340e-66 Identity = 108/212 (50.94%), Postives = 144/212 (67.92%), Query Frame = 0
Query: 5 SSFVPSFAGVRATFG-ARVCAASRRGASAVVMAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNW-AVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
++FV RA+ G A VC + + V M KS SVPFMD P AL + G VGFDP NIS ++NIKWL+E+E+KH RIC+LA LG IV EVY+FP+Y+ P + H++ A NG L Q+L++ SFFEIMT PAV QMITG+SDR PG F FDPLGLGK+P ++V+E+KNGRLAM+A+ G +H ++ ++ QL +G +P
Sbjct: 7 AAFVSGVGLARASVGRAAVCTKNVQ----VSMMAKSKSVPFMDAPPALDGSLAGDVGFDPLNISGFLNIKWLRESELKHGRICMLAALGMIVQEVYRFPFYQGAPAVATEAHDYFAKWNGPLGQVLIFASFFEIMTTPAVIQMITGESDRAPGYFAFDPLGLGKNPDARKRFEVSELKNGRLAMIAVGGMVHQMWLTKMGIIGQLQAGKFMP 214
BLAST of Ggra6595.t1 vs. uniprot
Match: chlorophyll a/b-binding protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA46561 (chlorophyll a/b-binding protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA46561) HSP 1 Score: 211 bits (538), Expect = 1.020e-65 Identity = 118/219 (53.88%), Postives = 146/219 (66.67%), Query Frame = 0
Query: 1 MAFISSFVPSFAGVRATFGARVCAASR---RGASAVVMAEKSPSVPFMDVPAALS--PDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
MAF+ +FVPS A V + GA A+R R A+ V M S SVPFM+VP AL+ P+MPG V FDP NISSY+ IKW+QEAEIKH RIC+LA LG +V E + FP+YK+ PHL H++ V G + IL+ FE +T PAV QMI G DR+PG F FDPL LGK+P+ + VNEIKNGRLAM+ I G IH ++NQ +EQL GN LP
Sbjct: 25 MAFVGTFVPSPAAVLSR-GATARVAARPVARSATTVTM-RASKSVPFMEVPPALAANPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAVIQMING-GDREPGYFGFDPLKLGKNPS----FAVNEIKNGRLAMIGIGGMIHQQWMTNQGSIEQLFKGNFLP 236
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A5J4YN76 (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN76_PORPP) HSP 1 Score: 207 bits (528), Expect = 1.770e-64 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 0
Query: 4 ISSFVPSFAGVRATFGARVCAASRRGASAVVMAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMT-MPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
+++FV S RA+ G R ++ G++ + M KS SVPFM+ PAAL M G VGFDP S+Y+++K+L+EAE+KH RIC+LA LG IV EVYQFP+Y P L H++ V GSL QILL+ SF E++ P + Q + G++DR PG F FDPLGLGKD AK Y+++E+KNGRLAM+A+ G IH A ++ +LEQL +G +LP
Sbjct: 8 MAAFVSSLGLARASVG-RGAVCTKPGSAQLSMMAKSKSVPFMEAPAALDGSMVGDVGFDPLGFSNYIDLKFLREAELKHCRICMLAALGIIVQEVYQFPFYSGAPRLATDAHDYFVKFGSLNQILLFASFIELVAGTPGIIQTMRGETDRAPGYFAFDPLGLGKDKAKFERYQLSELKNGRLAMIAVGGFIHQAWMAKVPVLEQLSTGKLLP 218
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A1X6P6J5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6J5_PORUM) HSP 1 Score: 207 bits (526), Expect = 3.120e-64 Identity = 115/218 (52.75%), Postives = 143/218 (65.60%), Query Frame = 0
Query: 1 MAFISSFVPSFAGV-RATFGARVCA-ASRRGASAVVMAEKSPSVPFMDVPAALS--PDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
MAF+S+FVP+ + V R ARV A R S V M S SVPFM+VP L+ P MPG V FDP NIS+Y+ IKWLQEAEIKH R+C+LA LG +V E + FP+YK+ PHL H++ V G + IL+ +E +T PAV QMI G DR+PG F FDPL LGK+PA + VNE+KNGRLAM+ I G IH ++NQ +EQL GN LP
Sbjct: 1 MAFVSTFVPAVSAVLRRGAPARVSTRAVARSVSTVTM-RASKSVPFMEVPPVLAENPSMPGNVEFDPLNISAYLPIKWLQEAEIKHGRVCMLACLGLLVQEFFTFPFYKNAPHLATSGHDYGVKVGGMVHILMAVVIWEALTTPAVVQMING-GDRKPGYFGFDPLNLGKNPA----FAVNEVKNGRLAMIGIGGMIHQQWMTNQGSVEQLLKGNFLP 212
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A7S0ZC59 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC59_9RHOD) HSP 1 Score: 203 bits (517), Expect = 1.690e-63 Identity = 94/168 (55.95%), Postives = 122/168 (72.62%), Query Frame = 0
Query: 48 PAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNW-AVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
P+AL M G VGFDP IS ++NIKWL+EAE+KH RIC+LA LG +V E+Y FP+Y PH+ H++ A NG L QILL+ SFFEIMT PA+ QM+TG+SDR PGDFKFDPL L K+ + +++NE+KNGRLAM+AI G +H A ++N +EQL SG +P
Sbjct: 2 PSALDGSMAGDVGFDPLGISDFLNIKWLREAELKHGRICMLAALGWLVQEIYTFPFYPGAPHVPTAAHDYFAKWNGPLGQILLFTSFFEIMTTPAIIQMVTGESDRMPGDFKFDPLKLAKNEETMKKFQLNEVKNGRLAMIAIGGLVHQAWLTNMGAIEQLQSGKFIP 169
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A7S2ZRW4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRW4_9RHOD) HSP 1 Score: 203 bits (517), Expect = 7.690e-63 Identity = 108/216 (50.00%), Postives = 141/216 (65.28%), Query Frame = 0
Query: 2 AFISSFVPSFAGVRATF-GARVCAASRRGASAVVMAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGK--DPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
AF+ SF PS R TF GAR+ A R A+ V M KS SVPFMD P AL M G VGFDP N S+Y+ + WL+EAEIKH R+C+LA LG + E Y FP+Y + P L H++ + +LAQ+LL+ +EI+T PAV QM+TGKSDR+PG F FDPL L DPAK Y+++E+KNGRLAM+AI G +H A ++ + Q+ +G P
Sbjct: 3 AFVGSFAPSRL-TRTTFAGARLSGAPVRSAARVTMQAKSKSVPFMDCPKALDGSMVGDVGFDPLNFSAYLPLSWLREAEIKHCRLCMLAALGWLTTEFYTFPFYANAPKLPTDAHDYF-TRTALAQVLLFVCVWEILTTPAVIQMVTGKSDRKPGYFGFDPLNLTSKWDPAKFEKYQLSELKNGRLAMIAIGGLVHQAWLTKMPAIAQIQAGKFFP 216
BLAST of Ggra6595.t1 vs. uniprot
Match: Q7XY91 (Light-harvest protein (Fragment) n=2 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY91_GRIJA) HSP 1 Score: 198 bits (504), Expect = 3.240e-62 Identity = 88/119 (73.95%), Postives = 103/119 (86.55%), Query Frame = 0
Query: 97 EVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMTMPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILPK 215
E+Y FP+Y PHL + RH+W V NGS+ QILLWCSFFEIMTMPA+ QM+ G+ DR PGDF FDPLGLGKDPAKLAV+KVNE+KNGRLAM A+SGAIHHAAI+NQNL+EQL SGN++PK
Sbjct: 1 ELYTFPFYSGAPHLAINRHDWGVENGSMKQILLWCSFFEIMTMPALVQMLNGQGDRVPGDFCFDPLGLGKDPAKLAVFKVNEVKNGRLAMCAVSGAIHHAAITNQNLVEQLTSGNVIPK 119
BLAST of Ggra6595.t1 vs. uniprot
Match: A0A2V3J1F6 (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1F6_9FLOR) HSP 1 Score: 199 bits (506), Expect = 3.800e-61 Identity = 103/218 (47.25%), Postives = 140/218 (64.22%), Query Frame = 0
Query: 1 MAFISSF-VPSFAGVR--ATFGARVCAASRRGASAVVMAEKSPSVPFMDVPAALSPDMPGYVGFDPFNISSYMNIKWLQEAEIKHARICLLAILGCIVAEVYQFPWYKDYPHLVVYRHNWAVSNGSLAQILLWCSFFEIMT-MPAVTQMITGKSDRQPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMVAISGAIHHAAISNQNLLEQLGSGNILP 214
MAF+SSF +P+ + A GA++ + ++V MAE S ++PF+ P + D GY GFDP ++ MN K+LQEAEIKHARIC+LA+LG ++ E Y FPWY + P L H W V+ GSL QIL+W SF+EI+ PA+ QM+T S RQPG + FDPLGLGK A ++ +EIKNGRLAM+AI G +H ++ ++QL G LP
Sbjct: 1 MAFVSSFTLPARQTLSRSAICGAKLASQPVPSRASVRMAETSAAIPFLPKPQNIPEDAAGYAGFDPLGFTNVMNFKFLQEAEIKHARICMLAVLGILIPEQYVFPWYSEAPKLAAGIHQWGVNQGSLNQILIWSSFWEIVVGTPALIQMLTLDSPRQPGYYAFDPLGLGKTQAAFKRFQTSEIKNGRLAMIAIGGLLHQEFLTGMTPVQQLLEGKFLP 218 The following BLAST results are available for this feature:
BLAST of Ggra6595.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6595.t1 ID=Ggra6595.t1|Name=Ggra6595.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bpback to top |