Ggra6589.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6589.t1
Unique NameGgra6589.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
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BLAST of Ggra6589.t1 vs. uniprot
Match: A0A2V3IR94 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR94_9FLOR)

HSP 1 Score: 170 bits (430), Expect = 2.150e-45
Identity = 84/134 (62.69%), Postives = 103/134 (76.87%), Query Frame = 0 
Query:   48 KSIEVYVNGDGALLVIGTTNGIVYVWNLKTKTRVGRMPQWGSAWITGVGLVFVHEELCCIWSSGTGPNRISDISRDASSEAYATVRGITVSKSGTKVVAAHEDGYVEIIDIAARRPILEPFAVKHSLPVAELTP 181
             ++ +Y + D  LLVIGT NG+V VWNL+TKT+VG MPQ G A  TGVGL+ V +ELCCIWSSG+G  R+SDISRDA+ EA+ T RGIT+SKSG + V A+EDG +E+IDIA+R PI E F V H L VAELTP
Sbjct: 1070 SALAIYEDRD--LLVIGTMNGLVSVWNLRTKTKVGSMPQTGGASTTGVGLIIVDDELCCIWSSGSGWVRVSDISRDATGEAHGTARGITLSKSGAEAVLANEDGLIEVIDIASRTPITEAFKVDHPLSVAELTP 1201
The following BLAST results are available for this feature:
BLAST of Ggra6589.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR942.150e-4562.69Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 46..194
e-value: 4.5E-9
score: 37.7
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 52..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:442282..443020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6589.t1Ggra6589.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 442282..443020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6589.t1 ID=Ggra6589.t1|Name=Ggra6589.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MTESIKAVELKLIKKALRLSYHYIHAICEGEMWFQLHARLSSMVLTNKSI
EVYVNGDGALLVIGTTNGIVYVWNLKTKTRVGRMPQWGSAWITGVGLVFV
HEELCCIWSSGTGPNRISDISRDASSEAYATVRGITVSKSGTKVVAAHED
GYVEIIDIAARRPILEPFAVKHSLPVAELTPGRKKLVFGAHDGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf