Ggra6552.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6552.t1
Unique NameGgra6552.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length799
Homology
BLAST of Ggra6552.t1 vs. uniprot
Match: A0A2V3IIY4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY4_9FLOR)

HSP 1 Score: 509 bits (1312), Expect = 3.450e-166
Identity = 478/797 (59.97%), Postives = 545/797 (68.38%), Query Frame = 0
Query:    8 PFTPPMSASASXXXXXXHSNLLSSYAAHMKSLSAALDTRAHALRNAXXXXXXXXXXXXXXXXXXXSLERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALTHSRDAITSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXLEMLEVAVRKRERDVDATEAAVALKSKRLASLENFERVVAPLQAFVDEFSALEQRETVSIRDDVAEGVQIALLALREMHTKLRALNDTRAQLDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELELVAREASISDSRRPLFPENS-RMKRRAEGFERDSRSGFQKSDE--LVGEEVTKEQSVSEEGANDEIGNVSPPRKQPRLRTVRRQLEFETAHRRLPNVSQGDTRKPDGDDGDNESEAAAEQLLPELVSARALWKERILRLEVVVRNMRENTMGPKAHVQPVLNAVAEKLGSVRKEIETAPLQHSAGSAKRDYAAEQGLQVRWGSVMREQLDAVREVQTGMLIGLNKQEDRTQGGETSDESSTATTGERNSGLRSTASLEQESSVDATLDVTTTIELKNEIEGHKNGSRTIPSLFQDVRSRREGRERQDENMALQA---RGEGRTRRTRRRIAVGSGRPPLREPSVNRTDDGATDLFQELASLRSELDTITGILNV 798
            P +PPMS    XXXXXXHS LL SYAAHMKSLS AL          XXXXXXXXXXXXXXXXXXXSLERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKL A+I+ NK++L+ TK  LE K ++L L+EKEYA L  S+ +I++++      XXXXXXXXXXXXXXXXXXXXXX X    E AVRKRERDVDA+EAA+ +KS RL+ LE FERVV PLQ FVDEF++ E R+TVSIRDDV +GVQ+AL ALREM ++ + LND RA+L+ +                                                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +S R    ENS R  R+    + D  +G  K       G   +  Q + +    +  G+ SPPRK+   R+VRRQLEFETAHRR+P  +  + +     DGD+ESE AAEQLLPELV ARALWKERILRLE VVRNMRENT G K HVQPVL AVA+KLG+VRKEIE AP QHSAG+A+RDYA EQ LQVRWGSVMR+QLDAVREVQTGMLIGLNKQEDR + GE S+ESST TTG+R SG RST S+E ESSV+ATLDVTTT +      G   G+  IPSLFQ  RSR + R R ++N +  A   R  G  ++T+ R+    GRP     S    DDGA DL QELASLRSELDTITGILN+
Sbjct:    8 PSSPPMSXXXXXXXXXXHSKLLDSYAAHMKSLSVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKLAAAISKNKDELRNTKNVLEDKTSELHLLEKEYATLIESKHSISTELDAARSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAVRKRERDVDASEAAITVKSDRLSWLEQFERVVTPLQTFVDEFASFEHRDTVSIRDDVPKGVQMALNALREMRSRSKVLNDHRAELEAVQATISDREKALRDKELATRQREHDLDVLETRLSNEQDKISLQTTELRESIRSLDDTRTEHDRREEGMHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESSRVYISENSARRSRQDMSLDADVHAGSDKDSHGANAGGGASGVQVMGDAVDKNTRGDGSPPRKRHAPRSVRRQLEFETAHRRIPASNMKNEQDAAQKDGDDESEVAAEQLLPELVGARALWKERILRLEAVVRNMRENTWGLKPHVQPVLTAVADKLGTVRKEIEEAPPQHSAGTARRDYATEQSLQVRWGSVMRQQLDAVREVQTGMLIGLNKQEDRAKTGEVSEESSTITTGDRVSGQRSTGSIEGESSVEATLDVTTTGDF-----GEHGGAGAIPSLFQRFRSRLQARGRPEDNASAAAEAPRNGGVAQQTKTRVRANEGRPGG-SGSGEADDDGANDLLQELASLRSELDTITGILNM 798          
BLAST of Ggra6552.t1 vs. uniprot
Match: R7QUJ6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUJ6_CHOCR)

HSP 1 Score: 171 bits (432), Expect = 2.230e-40
Identity = 143/349 (40.97%), Postives = 182/349 (52.15%), Query Frame = 0
Query:  489 ANDEIGNVSPPRKQPRLRTVRRQLEFETAHRRLPNVSQGDT-------------RKPDGDD-----------GDNESEAAAEQLLPELVSARALWKERILRLEVVVRNMRENTMGPKAHVQPVLNAVAEKLGSVRKEIETAPLQHSAGSAKRDYAAEQGLQVRWGSVMREQLDAVREVQTGMLIGLNKQEDRT--QGGET-----SDESSTATTGERNSGLRSTAS----LEQESSVDATLDVTTTIELKNEIEGHKNGSRTIPSLFQDVRSRREGRERQDENMALQARGEGRTRRTR-RRIAVGSGRP--PLREPSVNRTDDG--ATDLFQELASLRSELDTITGILN 797
            AND  G +  P       TVRRQLEFET  +R    S G               + P+ DD            DNESEAAA+ LLPEL+ ARALWKER++RLE VV NMRENT   K HVQP+L +V+ +L  +  EI++ P +H   S+K  Y  EQ  QVRWG+++REQLDAVR+VQTGMLI LNK+ED    + G         ES+T TT E + G R   S       ESSVD TLD T      +          +I S F+  R +     R    +A  +R     RR R  R A    RP  P+    V R   G   +DL +EL S+R++L++ITG  N
Sbjct:  520 ANDLNGALQDPEPS----TVRRQLEFETTVQRQATTSGGAVLPAPLVSRLPQAEKAPNQDDLDKAPTHVVNDDDNESEAAADDLLPELLGARALWKERVVRLEAVVENMRENTWALKPHVQPILTSVSTQLRDIHTEIDSTPERHPE-SSKASYGTEQQRQVRWGALIREQLDAVRDVQTGMLIALNKEEDSMFQESGPAPLPSEQSESATQTTSEPSEGPREKRSPPHMAGDESSVDVTLDATDGRLFPDHSLEATEDFGSITSSFRKFRRQM----RAQRGLAEASRNSRIIRRERVPREAPARMRPRQPVGRGVVVRETRGIRGSDLLRELESVRNDLESITGSTN 859          
The following BLAST results are available for this feature:
BLAST of Ggra6552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIY43.450e-16659.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUJ62.230e-4040.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..199
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableCOILSCoilCoilcoord: 270..297
NoneNo IPR availableCOILSCoilCoilcoord: 333..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 524..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:247172..249568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6552.t1Ggra6552.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 247172..249568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6552.t1 ID=Ggra6552.t1|Name=Ggra6552.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=799bp
MRRPPSPPFTPPMSASASPPSTPPHSNLLSSYAAHMKSLSAALDTRAHAL
RNAEARLESRGSALRAHERALASLERRMRSEMTAFLRDVAARQRQLSRWE
QRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALTHSRDA
ITSQIEAANTELNRLAAEARRISDEKLRLETLANRLEMLEVAVRKRERDV
DATEAAVALKSKRLASLENFERVVAPLQAFVDEFSALEQRETVSIRDDVA
EGVQIALLALREMHTKLRALNDTRAQLDTLQATLEQSENVLRERELSIRQ
REHNVDVTEARISTEQDKLSLQNNQLKDGMRSLDSSRANVDRREEQIHNK
ERELMQRESKLHHREAAITQSEKTLTRRERSIRRAHAVVTERESVIDQRE
RDVETERANFNNMKRSIDLREAMLETRELELVAREASISDSRRPLFPENS
RMKRRAEGFERDSRSGFQKSDELVGEEVTKEQSVSEEGANDEIGNVSPPR
KQPRLRTVRRQLEFETAHRRLPNVSQGDTRKPDGDDGDNESEAAAEQLLP
ELVSARALWKERILRLEVVVRNMRENTMGPKAHVQPVLNAVAEKLGSVRK
EIETAPLQHSAGSAKRDYAAEQGLQVRWGSVMREQLDAVREVQTGMLIGL
NKQEDRTQGGETSDESSTATTGERNSGLRSTASLEQESSVDATLDVTTTI
ELKNEIEGHKNGSRTIPSLFQDVRSRREGRERQDENMALQARGEGRTRRT
RRRIAVGSGRPPLREPSVNRTDDGATDLFQELASLRSELDTITGILNV*
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