Ggra6543.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6543.t1
Unique NameGgra6543.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Homology
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A7S2ZA71 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZA71_9RHOD)

HSP 1 Score: 261 bits (668), Expect = 5.760e-86
Identity = 122/194 (62.89%), Postives = 155/194 (79.90%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPETLAP 198
            R KR RK+AEVKR ++PND RLK   LSK  AAP+V K  D+D LA    P+SMFF +N +LGPP+ +LLDTNF NFS+ NK+DV R +L+CL AP+  C++DCV+ ELQKL  KY +AL++A+D+RF RL CSH+GTYADDC++ R+ A+RIYIVATCD+DLKRRIRKV G+PIMYIS H+Y +ERLP+ LAP
Sbjct:   24 RMKRTRKFAEVKRKLNPNDDRLKTMALSKARAAPIVGKVSDEDKLAKTPTPTSMFFNYNSALGPPYHVLLDTNFFNFSIKNKLDVRRSLLDCLMAPNFGCVTDCVMGELQKLGSKYKLALKIAKDKRFVRLPCSHQGTYADDCLVDRVIANRIYIVATCDRDLKRRIRKVPGVPIMYISSHKYAIERLPDALAP 217          
BLAST of Ggra6543.t1 vs. uniprot
Match: M2Y6A8 (PINc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6A8_GALSU)

HSP 1 Score: 248 bits (633), Expect = 5.790e-81
Identity = 117/193 (60.62%), Postives = 155/193 (80.31%), Query Frame = 0
Query:    7 KRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPET-LAP 198
            K +RK+A+V+R ++P D RLKIK  SKQ+AAP+V +  D++ L N   P+++FF +N SLGPPF IL+DTNFINFSV NK+D+ + M++CL AP   CI+DCV+AEL+KL  KY +AL+VARD+RF RL C+HKGTYADDC+++R+  +R+YIV TCDKDLKRRIRKV G+PIMYI  H+Y +ERLP+  LAP
Sbjct:    3 KMKRKFAQVRRKLNPKDQRLKIKLWSKQDAAPIVHQTKDEEKLRNLPVPTNLFFSYNLSLGPPFHILMDTNFINFSVVNKLDILKAMMDCLYAPCVACITDCVMAELEKLGTKYRLALKVARDKRFLRLKCTHKGTYADDCLIERVQQNRVYIVGTCDKDLKRRIRKVPGVPIMYIKQHRYTIERLPDAILAP 195          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A1X6P199 (PINc domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P199_PORUM)

HSP 1 Score: 234 bits (597), Expect = 1.960e-75
Identity = 115/198 (58.08%), Postives = 150/198 (75.76%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPD--KDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPET--LAP 198
            R KR R+Y   KRL++P D RL++K  +K +AAP+V +  D  K  +      S +FF  N +LGPPF +LLDTNF+N SV NK+D+ RGML+CLAA  T+ +S+CV+AELQKL  K+ +ALR+ARD+ F +L C+HKGTYADDCI+ R+ A RIYIVATCD+DL+RR+RKV G+PIMYISGH+Y VERLP+   LAP
Sbjct:    3 RAKRTRQYGATKRLLNPKDDRLQLKAAAKADAAPIVHRSSDATKGAVDATVQRSELFFSHNRALGPPFHVLLDTNFLNMSVVNKLDIARGMLDCLAASVTVYVSECVMAELQKLGPKFRIALRLARDKTFVQLPCTHKGTYADDCIVDRVTASRIYIVATCDRDLRRRLRKVPGVPIMYISGHKYTVERLPDAAFLAP 200          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A836CF02 (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF02_9STRA)

HSP 1 Score: 233 bits (593), Expect = 7.700e-75
Identity = 114/196 (58.16%), Postives = 153/196 (78.06%), Query Frame = 0
Query:    1 MGGARKKR--QRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPE 194
            MG A+K+R  + K+A+ KRL+SP D RLK  E++K+ A    AK  +K+       PS+MFF++N +LGPP+ +++DTNFINFS+ NK+D+ + M++CL A +T CI+DCVIAEL+KL  KY +ALR+A+D RF+RL CSHKGTYADDCI+QR   HR YIVATCDK+LKRRIRK+AG+PIMYIS  +Y +ER+PE
Sbjct:    1 MGRAKKQRAVKVKFAQSKRLISPKDPRLK--EVAKK-AEEKAAKAKEKETRQVTQTPSAMFFKYNTALGPPYHVIVDTNFINFSIKNKLDMVKSMMDCLLAKATPCITDCVIAELEKLGPKYRIALRLAKDERFQRLPCSHKGTYADDCILQRAEQHRCYIVATCDKELKRRIRKIAGVPIMYISNRKYTIERMPE 193          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A4P9Z3A2 (Fcf1-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3A2_9FUNG)

HSP 1 Score: 228 bits (582), Expect = 3.060e-73
Identity = 108/195 (55.38%), Postives = 154/195 (78.97%), Query Frame = 0
Query:    7 KRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILAN-NAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPETL-APT 199
            K+ R++A+VKRL+SPND+RLK  +  +++A+    +  +K+++ N     SS+FF++N +LGPP+ +++DTNFINFS+ NK+++ R M++CL A    CI+DCV+AEL+KL  KY VALRVARD RF+RL C+HKGTYADDCI+QR+  H+ YIVATCD+DLKRRIRK+ G+PIM+I+ H+Y +ER+PE   APT
Sbjct:    4 KKTRQFAQVKRLLSPNDARLKANQAKEKKAS----EDKEKELVRNIPQMASSLFFKYNTALGPPYHVIVDTNFINFSIQNKLELVRAMMDCLYAKCVPCITDCVLAELEKLGSKYRVALRVARDPRFERLPCTHKGTYADDCIVQRVMQHKCYIVATCDRDLKRRIRKIPGVPIMFIAQHKYTIERMPEAYGAPT 194          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A316UYX8 (Fcf1-domain-containing protein n=2 Tax=Microstromatales incertae sedis TaxID=162477 RepID=A0A316UYX8_9BASI)

HSP 1 Score: 228 bits (581), Expect = 4.200e-73
Identity = 111/199 (55.78%), Postives = 155/199 (77.89%), Query Frame = 0
Query:    4 ARKKRQRKYAEVKRLVSPNDSRLK---IKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPETLAPT 199
            A++K+ +K+A VKR+++PND RLK   +K  +K++AA       ++ +     A SS+FF+ N +LGPP+R+L+DTNFINFS+ NKI++ +GM++CL A S  CI+DCV+AEL+KL  KY +ALRVARD RF+RL CSHKGTYADDCI+ R++ H+ Y+VATCDK+L+RR+RKV GIP+MYIS H+Y VERLP+   P+
Sbjct:    2 AKRKQVKKFATVKRMLNPNDQRLKENQVKADAKKKAA------EEQKVRHVETAASSLFFQHNTALGPPYRVLVDTNFINFSLQNKIELVQGMMDCLYAKSIPCITDCVLAELEKLGPKYRIALRVARDPRFERLPCSHKGTYADDCIVDRVSTHKCYMVATCDKELRRRVRKVPGIPLMYISKHRYAVERLPDQGMPS 194          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A2N1J8V3 (PINc domain-containing protein n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1J8V3_9BASI)

HSP 1 Score: 228 bits (580), Expect = 5.770e-73
Identity = 109/190 (57.37%), Postives = 152/190 (80.00%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPE 194
            ++KR RK+ EVKRL++PND+RLK    + +E A   AKK ++       A SSMFF+ N +LGPP+ +++DTNFINFS+ NKI++ +GM++CL A +T CI+ CVI+EL+KL  KY VALRVARD RFKRL C+HKG+YADDCI++RI +H+ YIVATCD++L+RR+R+V GIP+MYI+ H+Y++ERLP+
Sbjct:    3 KQKRVRKFGEVKRLMNPNDNRLK----NSKELAVAEAKKTEEKKRRVELAASSMFFQHNMALGPPYHVIVDTNFINFSLQNKIELVQGMMDCLYAKATPCITTCVISELEKLGPKYRVALRVARDPRFKRLECTHKGSYADDCIIERIKSHKCYIVATCDRELRRRVRQVPGIPLMYIARHRYRIERLPD 188          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A7S2DVI1 (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVI1_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.840e-73
Identity = 109/192 (56.77%), Postives = 150/192 (78.12%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAA--PVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPE 194
            ++K+ RKYA  K+++S NDSR+K  + +++E A   +  +KP +     +  PS+MFF++N +LGPP+ IL+DTNFINFS+ NK+++T  M+NCL A  T CI+DCV+AEL+KL +KY VALR+A+D RF+RL C+HKGTYADDC++ R   HR YIVATCDKDL+R+IRKV G+PIMYISG +Y VER+PE
Sbjct:    9 KQKKTRKYAVAKKVISKNDSRIKENQKAQKETALKKIETEKPRQI----DQTPSTMFFKYNTALGPPYHILVDTNFINFSIKNKLEITASMMNCLFAKCTPCITDCVMAELEKLGQKYRVALRLAKDPRFERLPCTHKGTYADDCLLHRCTQHRCYIVATCDKDLRRKIRKVPGVPIMYISGRKYTVERMPE 196          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A7S0N8X1 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8X1_9CHLO)

HSP 1 Score: 226 bits (577), Expect = 1.700e-72
Identity = 109/194 (56.19%), Postives = 152/194 (78.35%), Query Frame = 0
Query:    1 MGGARKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPE 194
            MG A+K   RK+AEVKR+++P D+++K KE  K +      KK + ++    AAP+S+FF++N +LGPP+++++DTNFINFS+ NK+DV + ML+CL A  T  I+DCV+AEL+KL +KY VALR+A+D RF+RL C+H GTYADDCI++R+  H+ YIVATCD+DLKRRIRK+ G+PIMYI  H+Y +ERLPE
Sbjct:    1 MGKAKK--TRKFAEVKRMLNPKDAKVK-KESKKPQ------KKKEDEVRHVEAAPTSLFFKYNTALGPPYQVIIDTNFINFSIRNKLDVVQSMLDCLYAKCTPFITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHTGTYADDCIVERVKQHKCYIVATCDRDLKRRIRKIPGVPIMYIRSHKYSIERLPE 185          
BLAST of Ggra6543.t1 vs. uniprot
Match: A0A197K8F8 (Fcf1-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197K8F8_9FUNG)

HSP 1 Score: 226 bits (577), Expect = 1.820e-72
Identity = 113/196 (57.65%), Postives = 150/196 (76.53%), Query Frame = 0
Query:    7 KRQRKYAEVKRLVSPNDSRLKIKE--LSKQEAAPVVAKKPDKDILANNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSTICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPETL-APT 199
            K  +K+A VKR+++PND+RLK+ +  L K+E      +K  K +       SSMFF +N +LGPP+RIL+DTNFINFS+ NKI++ +GM++CL A S  CI+DCV+AEL+KL  K+ VALRVARD RF+RL C+HKGTYADDC+++R+  H+ YIVATCD+DLKRRIRK+ GIPIMY+S  +Y +ERLPE   APT
Sbjct:    5 KTTKKFALVKRMINPNDARLKVNQEKLKKKEE-----EKEKKAVRHIPQVASSMFFNYNSALGPPYRILVDTNFINFSIQNKIELVKGMMDCLYAKSIPCITDCVMAELEKLGPKFKVALRVARDPRFERLPCTHKGTYADDCLVERVMQHKCYIVATCDRDLKRRIRKIPGIPIMYLSQRKYTIERLPEAYGAPT 195          
The following BLAST results are available for this feature:
BLAST of Ggra6543.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2ZA715.760e-8662.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y6A85.790e-8160.62PINc domain-containing protein n=1 Tax=Galdieria s... [more]
A0A1X6P1991.960e-7558.08PINc domain-containing protein n=1 Tax=Porphyra um... [more]
A0A836CF027.700e-7558.16Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4P9Z3A23.060e-7355.38Fcf1-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A316UYX84.200e-7355.78Fcf1-domain-containing protein n=2 Tax=Microstroma... [more]
A0A2N1J8V35.770e-7357.37PINc domain-containing protein n=1 Tax=Malassezia ... [more]
A0A7S2DVI15.840e-7356.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0N8X11.700e-7256.19Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A197K8F81.820e-7257.65Fcf1-domain-containing protein n=2 Tax=Mortierella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002716PIN domainSMARTSM00670PIN_9coord: 70..169
e-value: 1.9E-7
score: 40.7
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 95..191
e-value: 1.1E-29
score: 102.7
NoneNo IPR availableGENE3D3.40.50.1010coord: 54..197
e-value: 7.6E-38
score: 131.7
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 5..196
NoneNo IPR availablePANTHERPTHR12416:SF2RRNA-PROCESSING PROTEIN FCF1 HOMOLOGcoord: 5..196
IPR037503rRNA-processing protein Fcf1, PIN domainCDDcd09864PIN_Fcf1-likecoord: 60..190
e-value: 8.3378E-81
score: 234.737
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 68..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:224548..225153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6543.t1Ggra6543.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 224548..225153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6543.t1 ID=Ggra6543.t1|Name=Ggra6543.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
MGGARKKRQRKYAEVKRLVSPNDSRLKIKELSKQEAAPVVAKKPDKDILA
NNAAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAP
STICISDCVIAELQKLPKKYSVALRVARDRRFKRLICSHKGTYADDCIMQ
RIAAHRIYIVATCDKDLKRRIRKVAGIPIMYISGHQYKVERLPETLAPTL
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR006984Fcf1/Utp23
IPR037503Fcf1_PIN
IPR029060PIN-like_dom_sf