Ggra6529.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6529.t1
Unique NameGgra6529.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length858
Homology
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A2V3J430 (Pre-mRNA cleavage complex 2 protein Pcf11 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J430_9FLOR)

HSP 1 Score: 731 bits (1886), Expect = 2.460e-251
Identity = 455/872 (52.18%), Postives = 527/872 (60.44%), Query Frame = 0
Query:    1 MFHQSNFVANAAPQPPAARXXXXRPPLDLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCDATPYAPMH--APPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHSN--GAPPPALP------------------------------------------PPPQEFVELETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPST---------SQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLDVFLGNVDPNAKPTNPSVNKKTVADENDDRTVSVVESMSDNDICAACHEAFETFWDDDKHAWMLRDCTKTDDDELYHVKCMQYAALAADEAXXXXXXXXXXXXXXXXXXXXXDVPAPQQPEEEKPKLENGNLDAALTTXXXXXXXXXXXKPLETQQXXXXXXXPPEPSTTATEISAPAATTKEEPLPAVHTPYNEGMVSQISIPKTEPNMTSVDDQGLNHLRTAAHV-----MPHKQEPLMSAPGDVINICASPMQGLTMVSPGNVAASDVQGKVIISKVPKWLAATTGIKVMHLEPARKEEARFASTSPPSGQKRRRSEVE 812
            MFHQSN+V+NA P  P+A     RPPLDLSSIPP  Q AALEYDAFLN+LTWNSKQVINQLTTIAA+N+ AADAISSVIEQRIFNA P  KLP+LYLMDSIVKNVGRRYLSRFAENLFHTFT++YAVA  ++RMSLRRMLSTWPDIYGFELVNAMTTRA+Q DATPY  MH  APPP A+         Y+A                                     Q P      +P+ PA H+    AP PA+P                                              EFV+LE MMTQVIRNASMG LPSNHQLFTLN MIT+QLQS+   +QR+AL+RYQ+QLR+ISSAPRHR  P P T          PS          SQVP   VS  L NLLRAMPPGLLHTVQSVA SS P+P AS+   PSPA + R    PR LP++  PS+ A  +S VL FA LK MSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGT+EQVVVGGQSRGWFDTLDVFLG VDPNAKPTNPSVNKK V D+NDDRTVSVVE+ SDNDICAACHEAFETFWDDDKHAWMLRDCT+TDDDELYHVKCMQYA L ADE+                     D+P  Q+ +  KP +EN    +  +T             ++T          P+P++ A E + P+          + T   +  V +     +  N  S  +   N   T +H      M  K+  L    G+ ++  A+  +G+++ S       D++G +           T   K   LE       +  ST PPSGQKR+R + E
Sbjct:    1 MFHQSNYVSNAPPHAPSAPPPSIRPPLDLSSIPPTFQEAALEYDAFLNELTWNSKQVINQLTTIAADNLSAADAISSVIEQRIFNAAPTIKLPFLYLMDSIVKNVGRRYLSRFAENLFHTFTDAYAVAPPTVRMSLRRMLSTWPDIYGFELVNAMTTRANQIDATPYGQMHPHAPPPSAMHHXXXXXXXYFA-------------------------------------QPPR-----VPIPPAPHARVQAAPQPAIPVLHSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFVQLERMMTQVIRNASMGALPSNHQLFTLNSMITSQLQSTPPIVQRNALLRYQRQLRDISSAPRHRNTPTPTT----------PSXXXXXXXXXPSQVPRATVSNVLNNLLRAMPPGLLHTVQSVAQSSRPMPTASVADPPSPAVLTRHPAAPR-LPNSAAPSFPAAPTSPVLLFANLKNMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTREQVVVGGQSRGWFDTLDVFLGTVDPNAKPTNPSVNKKNVEDDNDDRTVSVVEAKSDNDICAACHEAFETFWDDDKHAWMLRDCTRTDDDELYHVKCMQYAVLNADESD--------------------DIPQQQEDDGIKPDIEN---TSPASTNIITNSQGFSSTNVKTDPM-------PKPNSAAAE-AVPSTN-------GIKTELAKLRVEETGARGSTANFASQVESS-NKGSTESHASYQTGMLKKEHELAKQGGEFVDPTANNGEGMSLASVSATDKKDMKGHLTDGH-----PTTEDTKQEPLELKGNRNTQVTST-PPSGQKRKRMDNE 774          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S0BKE9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BKE9_9RHOD)

HSP 1 Score: 171 bits (432), Expect = 1.300e-41
Identity = 163/571 (28.55%), Postives = 256/571 (44.83%), Query Frame = 0
Query:   28 DLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCDATPYAPMHAPPPPAVRMPAQQ--PAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHS-NGAPPPALPPPPQEFVELETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLDVFL-GNVDPNAKPTNP------SVNKKTVAD-------ENDDRTVSVVESMSDNDICAACHEAFETFWDDDKHAWMLRDCTKTDDDELYHVKCMQYAAL 581
            + S + P+ +  A EYDAFL +LT+NS  VI  LT IA EN+ A  +I   IE RI  A    KLP LYL+DSIVKNVG  Y+  F  N+F  FT+ Y +A       LR++L+TW DI+G EL + M  R  + D        +    ++++P ++   +QY                                               G P   ++ + +     AL    Q  ++++ +  +++  A  G  PS   L  L+ ++  +LQ      +   ++  Q Q+ + +   + +AA  P                   GP  +A +++   A+    + +V +  +S+    PA  GS   P   A  ++  R     V  +     ++   +F +++   H   V  LY +LP+ S +DG RFA  E LR HLDWLF +N++K  T +Q   GG SR WF ++  +L G    +A   N        VN++   D        + D+ V V  +  DN+IC  C E FETFWD+D+  W  +D  +T D ++YHV CM    L
Sbjct:   17 NFSRLSPEERLPAQEYDAFLQELTFNSLPVIKNLTKIAGENVAARRSIVFAIESRIGLAEINKKLPLLYLVDSIVKNVGGEYIQAFRLNIFKVFTSMYEIADYETCARLRKLLNTWSDIFGQELCDLMWRRVHERDQRNADNSSSSKTQSLKIPKKEHSSSQYPETNKRPRYDS---------------------------------GSAGQPQNISMDNLSTIEAQALV---QLDIQVQRLTNEIVSKAVAGQPPSLDVLQALSALLAVKLQHVKNPEELKNVLDLQAQITQ-NIQQQQQAAQNPS------------------GPSSNA-ISDAQNALAVPQIASVVAPTNSA----PAWQGSAVQPTNPAHSAKTDRASTQ-VRTTARVTRTNVCGSFDKIRKFPHRGTVALLYDELPHKSAADGNRFAKVEDLRAHLDWLFEKNKKK--TSKQH--GGISRNWFISVAEWLEGRSQTSASKANTVEAIFRDVNQQADKDVGGLDITPSGDK-VGVARADGDNEICPICGEKFETFWDEDEQTWKWQDALRTADGKVYHVFCMSSPVL 521          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S2ZWH7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWH7_9RHOD)

HSP 1 Score: 162 bits (411), Expect = 7.480e-39
Identity = 161/574 (28.05%), Postives = 237/574 (41.29%), Query Frame = 0
Query:   28 DLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCDATPYAPMHAPPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHSNGAPPPALPPPPQEFVELETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQ--------SSATHLQRSALMRYQQQLREI---SSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLDVFL-GNVDPNAKPTNP------SVNKKTVAD-------ENDDRTVSVVESMSDNDICAACHEAFETFWDDDKHAWMLRDCTKTDDDELYHVKCM 576
            + S + P+ +  A EYDAFL +LT+NS  VI  LT IA ENI A  +I   IE RI  A    KLP LYL+DSIVKNVG  Y+  F  N+F  FT+ Y          LR++L+TW DI+G EL + M  R    D           P ++++P ++   + +                                     QL                               ++++ +  +++  A  G  PS   L  L+ ++  ++Q         +   LQ       QQQ +     S+A  +  A A K   +SAP  AP     V  P  S        A  P  +H       +S          + + AA  RP+                       +F +++   H   +  LY +LP+ S +DG RFA  E LR HLDWLF +N++K  T +Q   GG SR WF ++  ++ G    +A   N        VNK+   D       ++ D+ V V  +  DN+IC  C E FETFWD+D+  W   +  +T   ++YHV CM
Sbjct:   17 NFSRLSPEERLPAQEYDAFLRELTFNSLPVIKNLTKIAGENIEARRSIVFAIESRIGLAEVDKKLPLLYLIDSIVKNVGGEYVQAFRLNIFKIFTSVYDQVDYETCARLRKLLNTWSDIFGQELCDLMWRRVHDRDGRNADIPETSKPQSLKIPKKE---HSSSQYPETNKRPRYDSGSTSQPQNITMDNLSTIEAQALVQLD------------------------------IQVQRLTNEIVSKAVAGQPPSLDVLQALSALLAVKIQHVNNPDELKNVLDLQAQITQNIQQQQQAAQNPSAASSNAIADAQKA--LSAPQIAP-----VVAPTTSTPAFQGSTAQQPNPVHRAAKTDRAST--------QVRTTAAETRPN--------------------VCSSFDKIRKFPHGGTIALLYDELPHKSAADGNRFAKVEDLRTHLDWLFEKNKKK--TSKQH--GGVSRSWFISVAEWVEGQSQTSASTANTVEAIFRDVNKQADKDVGGLHVPKSGDK-VGVARADGDNEICPICGEKFETFWDEDEQTWKWEEALRTAGGKVYHVFCM 517          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S0T4Q6 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4Q6_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 4.000e-38
Identity = 165/632 (26.11%), Postives = 243/632 (38.45%), Query Frame = 0
Query:   18 ARXXXXRPPLDLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCD-------------ATP-YAPMHA----------PPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHSNGAPPPALP-----PPPQEFVELET----MMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPSRVPRRLPDA--VGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWF--------DTLDVFLGNVDPNAKPTNPSVNK------------------------------KTVADENDDRTVSVVESMSDND-ICAACHEAFETFWDDDKHAWMLRDCTKTDDDELYHVKC 575
            +R    RPPLDLS++P      A EYD FL  LT+NSK++IN LT IA EN      I+ V++ RI ++PP  KLP +YL+DSI+KNV + Y   F   +       Y   S+ +R  L+++++TWP  +G  +VN +     + D             A P YA  HA          P PP   +P+Q  A  +A                                                 RP      APP ++P     P      ++E+    +M ++  +   G  P    +  L  +I +Q+Q  A   ++                 RH                           ++     N+   +P G    VQ  A        AS      P A+ + S+    +  A  +G      SS    +F ++K  SH A VR LY DL +++++DG RFATK+ LR HLDWLF   +RKR +         SR WF        +  DV L   D  A   N + +K                                 AD   +     VE+  D D +C  C E FE+ W D + AW+L+   K  + E+YH +C
Sbjct:   24 SRSADRRPPLDLSALPQVDHLVAKEYDVFLGQLTFNSKELINALTRIAEENKAVCPVIAFVLDSRILSSPPDKKLPLVYLLDSILKNVTKPYRDLFGARVHELMPRVYGACSTDVRTRLQKLVATWPPFFGPNVVNFILAEFGKIDVAQRNSVGSSALYANPEYARPHAQSMAAVASAFPQPPVSTLPSQAVAHPFA------------------------------------------------TRPQHEHQPAPPSSVPSSVQPPYASSLADMESETRALMERINYDCQRGQQPPVELVTRLQTLIASQMQLVAADQRK-----------------RH---------------------------NLELLSRNIAVLLPGG---GVQPAA--------ASFPGQKPPYALPQSSQRQPTIAQAHEIGAGAGNSSSQLCSSFNDIKSSSHAAAVRLLYDDLKHIARNDGSRFATKDQLRTHLDWLFEHQKRKRSS------AAHSRTWFASQNDWCNNVKDVALSGADVAAIFENAAASKGGAATGASGGAAAFGDELAAKKARGIKRTSAGTADGGPEEGEDTVEASGDGDEVCGICGEPFESEWIDSRQAWILQGAIKVGE-EIYHKRC 545          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A5J4Z1Z6 (Polyadenylation and cleavage factor-like 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1Z6_PORPP)

HSP 1 Score: 143 bits (360), Expect = 2.060e-32
Identity = 157/594 (26.43%), Postives = 225/594 (37.88%), Query Frame = 0
Query:   26 PLDLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCDATPYAPMHAPPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHSNGAPPPALPPPPQEFVELETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPL-------------------PPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLD--------VFLGNVDP------------NAKPTNPSVNKKTVADENDDRTVSVVESMSDND-ICAACHEAFETFWDDDKHAWMLRDCTKTDDD---ELYHVKCM 576
            P DLS +P       LEYDAFLN LT+NSK +IN LT +A EN   A AI   IE  I       KLP +YL+DS+VKNV   YL  FA  +      +Y  +S  +R+ LRR+L TW   +G + V A+  + DQ D                                                                 +  GAG       A+   G+             ++  ++ Q +R           +L  LNR   TQ        +R++     + L  + + P  + A A   + + +  P P   S  P P V+     L + M  G  H   +V  +  PL                   P +  G   S AA+++P                 P  S   +F  LK  S    V +LY  L ++SK DG RFA+KE LR HLDWLF+ N+ K+  K        SR WF  +D        V + + D             +A     SV  + +    + R       + D D  C  C E F+T W+D++ AWML+D  +  D     + H KC+
Sbjct:    3 PPDLSQVPAWDHGLVLEYDAFLNTLTFNSKDIINALTRVAHENKKDAPAICYAIESSILRHHGDRKLPLVYLLDSVVKNVRSPYLDLFAPRIGIILCEAYKASSVEIRVKLRRLLGTWVPYFGAQSVQALQAQLDQID--------------------------------------------------------------NMVVSSGAG-------AVQHMGS------------SQVAILLEQDVRR----------KLEELNRY--TQHGMPIPDEKRTSCQASIEALINLENNPAKKQALAALLAQVLSGQPQPAVASNAPLPMVAPGYFALPQQMQIGHHHPAAAVMAAPVPLQHQPQQQQQAMHAGMDGTEPTSHKGKKASAAAVSKP-----------------PKQSACTSFGALKSTSPDGAVYALYDKLSHVSKPDGARFASKEMLRAHLDWLFQYNKMKKERKNSAAA---SRPWFARVDDWQLNLKEVSMSDADVAAIFNQQARGTGDAGSQQQSVASQQLTAVGEARNELEQLEVGDGDEACVVCGEKFDTEWNDEREAWMLQDAVRLSDSAELSICHPKCL 483          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S0ZKS5 (Hypothetical protein (Fragment) n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKS5_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 5.220e-32
Identity = 140/493 (28.40%), Postives = 208/493 (42.19%), Query Frame = 0
Query:   24 RPPLDLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCDATPYAPMHAPPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLP-MRPALHSNGAPPPALPPPPQEFVELETMMTQVIR--------NASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPL--PPASIGSLPSPAAMARPSRVPRRLPDAVGPSYS-APSSSTVL---TFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDT-LDVFLG 500
            R PLDL  +  + Q+ ALEYD FL+ LT+NSK++IN LT +A +N   A A+  V+E RI +APP   LP +YLMDSI+KN+G  +   FA  +       Y  +S      LR+++ TW  + G  +V  + +  D  D +              + +  PA  +A                                       P  A   +P M  AL        ++P P      + + M Q  R        N+  G  P+   +  L  +I +QLQ    H  R  LM     +          A+  P+   +S P                  +TN     P   L   Q+   SS P    P  +G  P+ +A  +       + +AV PS +  P+ S++    +F++LK  SH   V SLY+ LP +SK DG RF T++ LREHLDWLF  N+++R       + G SR W+ + LD   G
Sbjct:    7 RVPLDLRPLMGRDQSGALEYDQFLSQLTFNSKEIINSLTRVAGDNKNMAPALCFVLEFRILSAPPDKSLPLIYLMDSIIKNIGSPFRELFAARVAMIIPQVYFNSSLDTCTRLRKLIKTWHGVLGTSIVERINSECDIVDRSK------------GISSTNPAGIHAN--------------------------------------PQYARGNIPGMMNAL--------SVPQPGTNTAAILSKMEQETRALVEFISVNSQRGIPPTFEMVQHLQTLINSQLQLVTDHQVRHNLMLLSSNI----------ASMLPQQQPMSLP------------------VTNAFGPQPIPQLVAPQTALRSSTPTVAAPIQLGFQPTSSAAQK------TVSNAVKPSVNETPTQSSIELCPSFSKLKTFSHSGAVSSLYSALPNVSKMDGCRFVTRDELREHLDWLFEYNKKRR-------ITGLSRPWYASELDWISG 400          
BLAST of Ggra6529.t1 vs. uniprot
Match: M2XQA7 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQA7_GALSU)

HSP 1 Score: 143 bits (361), Expect = 5.270e-32
Identity = 153/580 (26.38%), Postives = 232/580 (40.00%), Query Frame = 0
Query:   39 AALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQC------DATPYAPMHAPPPPAVRMPA------QQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHGAGRGLPMRPALHSNGAPPPALPPPPQEFVEL--ETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQ-----LREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPGPHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLT-FAELKGMSHHAGVRSLYTDLPYLSKSDGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLDVFL--------------------GNVDPNAKPTNPSVNKKTVADENDDRTVSVVESMSDNDICAACHEAFETFWDDDKHAWMLRDCTKTDDDE---LYHVKC 575
            A+ EY  FL DLT+NSK +I+ LT IAAEN  AA AI   IE RI    P  KLP LYL+DSIVKNVG  Y S F +NL  TF +++     ++R S+ R+L TWP  +G  L++ +  RA++       +   Y  +H  P   +R  A       +P  Y                                            + +       +HS       L    Q   +L  +T+  Q++R    G +P+  QL  L  ++T  LQ +  ++     + Y QQ     + +I +   ++ A                           A + N ++++  G         ++S  +P  S  SL     ++     P         S S      ++T F  L+ + H   V  LY DL  +S+SDG RFAT+E LR+HLDWLF  N+R R  ++    GG  R W+ ++  ++                    G    N       + K         R  + V +    D C  C + FE  WDD+  A + +D  K   DE   ++HV C
Sbjct:   10 ASKEYSEFLLDLTFNSKPIIDNLTAIAAENKHAASAIVKAIESRIAAVSPDKKLPALYLLDSIVKNVGEPYRSLFEKNLQTTFLSAFRTVPKAVRQSMMRLLETWPPYFGNNLISLLKVRANEVQKQIQENTKGYEAVHVNPQVLLRTTAGNSHVDTKPQNYNVSYLERAQEKVPVPKPKENRIPAFLRLQQHGILNNNSEPTRKSSSK---QASGVHSRLDTSSELMKQLQVETQLLVDTINAQLVR----GMMPTQEQLNALQALVTVILQYANFNIIAQNFVPYLQQHTDNIVNQIKTLQENQQAQ-----------------------EQEAVIANAIQSLMSG---------YNSQLVPQNSESSL----LVSERKIFPNNSKFESDVSSSCQVQDEIITDFNILRRLDHGFIVCKLYDDLQIVSESDGSRFATREDLRQHLDWLFEWNKRLRARRQ----GGICRMWYSSVHEWIQGTTSVRNSGMISSSMIFEDGTSQINIDKREQQLKKVDEEANQTHRHENKVFAGDCEDRCFVCGDCFEMEWDDELEALVYKDAIKEGGDEGTKIFHVDC 542          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S2ZYC4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYC4_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 1.450e-23
Identity = 63/136 (46.32%), Postives = 79/136 (58.09%), Query Frame = 0
Query:   28 DLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCD 163
            + S + P+ +  A EYDAFL +LT+NS  VI  LT IA ENI A  +I   IE RI  A    KLP LYL+DSIVKNVG  Y+  F  N+F  FT+ Y          LR++L+TW DI+G EL + M  R    D
Sbjct:   17 NFSRLSPEERLPAQEYDAFLRELTFNSLPVIKNLTKIAGENIEARRSIVFAIESRIGLAEVDKKLPLLYLIDSIVKNVGGEYVQAFRLNIFKIFTSVYDQVDYETCARLRKLLNTWSDIFGQELCDLMWRRVHDRD 152          
BLAST of Ggra6529.t1 vs. uniprot
Match: mRNA cleavage factor complex component Pcf11 n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D04CB05 (mRNA cleavage factor complex component Pcf11 n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D04CB05)

HSP 1 Score: 116 bits (290), Expect = 3.480e-23
Identity = 165/606 (27.23%), Postives = 236/606 (38.94%), Query Frame = 0
Query:   37 QAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPD----------IYGFELV----NA-MTTRA---DQCDATPYAPMHA-------PPPPAVRMPAQQPAQYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPH------GAGRGLPMRPALHSNGAPPPALPPPPQEFVELETMMTQV--IRNASMGTLPSNHQLFTLNRMITTQLQSSATHLQRSALMRYQQQL--REISSAPRHRAAPAPKTSHI-------------SAPPPAPPSTSQVPGPHVSATLTNLLRA--MPPGLLHTVQSVAHSSH-PLPPASIGSLPSPAAMARPSRVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKSDGMRFAT----KEALREHLDWLFRQNRR-----KRGTKEQVVVGGQSRGWFDTLDVFLGNVDPNAKPTNPSVNKKTVADENDDRTVSVVESMSD-NDICAACHEAFETFWDDDKHAWMLRDCTKTDDDELYHVKCMQYAAL 581
            +  A +Y   L DL+ N +  I+ LT IA EN   A AI+ V++Q I  APP  KLP LY++DSIVKNVG  Y   F  NLF TF  SYAV   ++R  +  ML TW D          ++  ELV    NA M  RA    Q    P  P  A       P PP +R  A  PA  Y                                      Q PH      G       +P+L   G   PA P      + +ET+   +  +  A       N    ++   +   L   A  +QR++L   Q +L   +  +AP H  + A     +              +PPP      Q P  +    L  L +A  +PP    +  + + ++H P PP +    P+ A++   S++      A  P   AP++   L  A LK   H   V +LY DL       G RF T    K+    H+DW FR ++R     +RGT     V  Q   W  + +V    VD +        +K+    +   + + V +  S  N++C  C E FE  W D    W+  D     +   YH  C   A +
Sbjct:    6 EEVAEDYRHALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKKLPSLYVLDSIVKNVGTPYTLYFGRNLFKTFMESYAVVDHNIRRKMEEMLRTWKDPVPGSMDTRPVFSHELVRPIENALMKARAASMPQQGPVPGRPRSAMLPHRDTPTPPGMRG-ASGPAGAYPGQPFPQPNGGRPGEPAPGGFAYPGQQ-----------QYPHHPTPQPGVSTPAAFQPSL--TGPYGPAAP----AGISVETLSNDIQNLIVAMRAEFSHNPHDASVQNRLRALLDLQAV-VQRTSLPPDQLELIKNKAFAAPPHTTSAALTLDSLLGPGALAALMHATRSPPPTQAGRPQPPSQNAVGLLDRLRQAGMLPPATRASAGAGSAAAHSPAPPPTSMLPPNIASLLSSSKL-----QAGQPGIEAPAAYPGLDAASLKQQFHPEAVAALYEDLGPPCTQCGRRFKTDAEGKKKKMAHMDWHFRVHQRSTEAERRGTHRSWYVDQQD--WLRSREV----VDSDHVAAPEEASKQAAEADKVPQYIPVPDPSSGVNNVCPICQEKFENKWLDTAQEWLWLDAVLVGN-RAYHASCHAEATM 580          
BLAST of Ggra6529.t1 vs. uniprot
Match: A0A7S3EHN5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHN5_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 3.370e-22
Identity = 59/137 (43.07%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   27 LDLSSIPPQLQAAALEYDAFLNDLTWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDSIVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFELVNAMTTRADQCD 163
            +DLSS+    +A A E+D  L +LT NS+ VI+ LT++AA+N    +AIS V+E RI+++    +LP LYL+DSIVKNVG  Y SR AEN+  TFTN+Y  +S  +R  ++ +L+TW  ++   + +A+  R ++ D
Sbjct:    8 IDLSSLSSFEEAPAREFDDLLAELTVNSRPVIHFLTSVAADNSAHVNAISFVLEWRIYHSSSDKRLPLLYLLDSIVKNVGYAYNSRIAENIVETFTNAYEFSSLELRQVMKTLLNTWFGLFETSICDAILVRLNEMD 144          
The following BLAST results are available for this feature:
BLAST of Ggra6529.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4302.460e-25152.18Pre-mRNA cleavage complex 2 protein Pcf11 n=1 Tax=... [more]
A0A7S0BKE91.300e-4128.55Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZWH77.480e-3928.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T4Q64.000e-3826.11Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z1Z62.060e-3226.43Polyadenylation and cleavage factor-like 4 n=1 Tax... [more]
A0A7S0ZKS55.220e-3228.40Hypothetical protein (Fragment) n=2 Tax=Timspurcki... [more]
M2XQA75.270e-3226.38Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZYC41.450e-2346.32Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
mRNA cleavage factor complex component Pcf11 n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D04CB053.480e-2327.23mRNA cleavage factor complex component Pcf11 n=1 T... [more]
A0A7S3EHN53.370e-2243.07Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 38..160
e-value: 5.5E-21
score: 85.7
IPR006569CID domainPFAMPF04818CIDcoord: 49..144
e-value: 2.2E-12
score: 47.3
IPR006569CID domainPROSITEPS51391CIDcoord: 35..163
score: 26.73382
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 29..159
e-value: 3.2E-33
score: 116.5
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 40..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 791..857
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..687
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..672
NoneNo IPR availableCDDcd16982CID_Pcf11coord: 42..163
e-value: 1.77651E-42
score: 148.868
IPR045154Protein PCF11-likePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 173..603
coord: 24..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:173964..176537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6529.t1Ggra6529.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 173964..176537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6529.t1 ID=Ggra6529.t1|Name=Ggra6529.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=858bp
MFHQSNFVANAAPQPPAARPPPPRPPLDLSSIPPQLQAAALEYDAFLNDL
TWNSKQVINQLTTIAAENIPAADAISSVIEQRIFNAPPQTKLPYLYLMDS
IVKNVGRRYLSRFAENLFHTFTNSYAVASSSMRMSLRRMLSTWPDIYGFE
LVNAMTTRADQCDATPYAPMHAPPPPAVRMPAQQPAQYYAPQQPRMHMPH
HAPEPRAQPPIPSLRSQPVRPPAASTPQLPHGAGRGLPMRPALHSNGAPP
PALPPPPQEFVELETMMTQVIRNASMGTLPSNHQLFTLNRMITTQLQSSA
THLQRSALMRYQQQLREISSAPRHRAAPAPKTSHISAPPPAPPSTSQVPG
PHVSATLTNLLRAMPPGLLHTVQSVAHSSHPLPPASIGSLPSPAAMARPS
RVPRRLPDAVGPSYSAPSSSTVLTFAELKGMSHHAGVRSLYTDLPYLSKS
DGMRFATKEALREHLDWLFRQNRRKRGTKEQVVVGGQSRGWFDTLDVFLG
NVDPNAKPTNPSVNKKTVADENDDRTVSVVESMSDNDICAACHEAFETFW
DDDKHAWMLRDCTKTDDDELYHVKCMQYAALAADEAADEAADEAADEAAD
EAAGEAADVPAPQQPEEEKPKLENGNLDAALTTTNNNNNNNNDNKPLETQ
QTNTNSETPPEPSTTATEISAPAATTKEEPLPAVHTPYNEGMVSQISIPK
TEPNMTSVDDQGLNHLRTAAHVMPHKQEPLMSAPGDVINICASPMQGLTM
VSPGNVAASDVQGKVIISKVPKWLAATTGIKVMHLEPARKEEARFASTSP
PSGQKRRRSEVEGARLELDNANVNSMAALTPPSLATNEEDVEPERKRQKE
CSAQTNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR045154PCF11-like