Ggra6461.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6461.t1
Unique NameGgra6461.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A2V3J591 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J591_9FLOR)

HSP 1 Score: 303 bits (777), Expect = 1.460e-101
Identity = 152/219 (69.41%), Postives = 182/219 (83.11%), Query Frame = 0
Query:    1 MSAGKDPVESQVRAELEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGYSVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSL-LREQGAIKGILKYLDWGSWR 218
            MS   DPVE +VR EL A+G+ LDELLNGGKVVSLTRKL+ LQ ES +L +D+  Y+ +Q++I KLQ+ + REKRQVMQ+WLKQLF+FQA  FL +G  L+FDAVPG SVPLVGQALGFWTTWLFTIPALRARKGT KAEKSALN+SFL +P+VNV LPA TKNCG+IWTADV VLA  Y+YY+AR+Y +   S GS  +RE+GAI+G+LKYLDWGSW+
Sbjct:   48 MSVSDDPVERRVREELAADGVRLDELLNGGKVVSLTRKLENLQTESNSLTEDNPSYNDLQRRIAKLQSQLVREKRQVMQSWLKQLFVFQAFLFLAIGGALAFDAVPGNSVPLVGQALGFWTTWLFTIPALRARKGTAKAEKSALNVSFLIMPLVNVFLPAFTKNCGLIWTADVSVLAACYLYYYARAYATVAASAGSEPVREKGAIRGVLKYLDWGSWK 266          
BLAST of Ggra6461.t1 vs. uniprot
Match: R7QH93 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH93_CHOCR)

HSP 1 Score: 257 bits (656), Expect = 8.040e-83
Identity = 132/217 (60.83%), Postives = 165/217 (76.04%), Query Frame = 0
Query:    5 KDPVESQVRAELEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGY-SVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYY--FARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            +DP+  +VR EL A+GINLDELLN GKVV+LTRKL+ L  ES+ L   S +    ++K+ KL++D+ REKRQVMQ WLKQLF+ QA+ F+ +G  L+ D VPG  SVPLVG+ALGFWTTWLFTIPALRARKGT+K EKSALN++FLA P++NV LPA+TKNCG+IW ADV +L   Y +Y   A+      E G   ++EQG +KGILKYLDWGSWR
Sbjct:   76 EDPMTRRVRDELAADGINLDELLNAGKVVNLTRKLEMLTAESEKLTAGSPELQDAKQKMSKLESDLVREKRQVMQNWLKQLFLLQAIVFIGIGGVLANDVVPGVDSVPLVGRALGFWTTWLFTIPALRARKGTSKTEKSALNVAFLATPLLNVALPALTKNCGIIWAADVALLGACYAFYGITAKRGADGDEEGNRPVKEQGKVKGILKYLDWGSWR 292          
BLAST of Ggra6461.t1 vs. uniprot
Match: M2VTY8 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTY8_GALSU)

HSP 1 Score: 141 bits (355), Expect = 2.360e-38
Identity = 88/203 (43.35%), Postives = 123/203 (60.59%), Query Frame = 0
Query:   17 EAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGYS-VPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            E    + +ELLN  K+ SL R+   L  + +  L D      +Q +++KL+ +I  EKR VM + L+ LF+ QA+  L VG  L+ +  P    VPLV +ALGFW  WLFTIP+LRARK    AEK+ALN++FLA P+ NV +P V K+  ++W  +V V+   Y YYF   +LS +       + Q  I+GIL+YLDWGSWR
Sbjct:   23 EQSTASTEELLNPAKLASLQRQYKELLEQFEQTL-DKHNRKEMQLRLEKLERNIELEKRSVMTSGLRSLFVVQAIVSLSVGGLLAANKFPFVQEVPLVFRALGFWMVWLFTIPSLRARK-PNMAEKNALNVAFLACPVANVVIPFVNKDTFLLWFVNVSVVLSLYGYYF---FLSDEAVRA---QSQLKIRGILRYLDWGSWR 217          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S4C3M2 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3M2_CHRCT)

HSP 1 Score: 142 bits (357), Expect = 1.980e-37
Identity = 90/214 (42.06%), Postives = 130/214 (60.75%), Query Frame = 0
Query:    8 VESQVRAELEAE-----GINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGYSVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGS 216
            ++ ++ A ++AE     G+ LD+LLN  KVV+L R       E    L ++E+ ++ Q K+DK++ D+ REKR V + WLK +FI Q+L  +V      +DAVPG S+ L  +ALGFW+ WLF IP+LRAR+     EK ALNI+FL  PI+ + LP VTK+   IW A++ +L G Y Y     YLS  E      +E G   G+L++LD+GS
Sbjct:   93 IDPELVARIDAEVLQLTGVPLDDLLNPSKVVNLERDRILCLAELAKSLPEAERVEL-QAKLDKVEQDLYREKRTVFRGWLKAVFIVQSLIAIVASGIFVYDAVPGVSLDLSLRALGFWSYWLFVIPSLRARR-PRGWEKKALNIAFLGSPILTLGLPFVTKDPAAIWGANLVLLVGCYAY----GYLSYSEE-----QEVGGFSGVLRWLDFGS 295          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A1X6NZQ5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZQ5_PORUM)

HSP 1 Score: 128 bits (321), Expect = 3.380e-34
Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 0
Query:   78 MQTWLKQLFIFQALAFLVVGAFLSFDAVPGYS---VPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            MQ WLK++F+ QA     V   L++   PG+    VPLVG+ LGFW  WLFT+PALRARK   KAEKSA N++FL +P++NV  P V+++  +IW+ADV ++   +V+Y   +     + GG   +E+  I+G L++LDWGSW+
Sbjct:    1 MQLWLKRVFLGQAALSAAVSGLLAWGVAPGFGADGVPLVGRVLGFWLLWLFTVPALRARK-PEKAEKSAWNVAFLGMPLLNVAAPFVSRDPALIWSADVALMVAVFVWYVVLA--DSGDGGGGSAKEEVKIRGWLRWLDWGSWK 141          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S0BLT0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLT0_9RHOD)

HSP 1 Score: 127 bits (320), Expect = 1.030e-32
Identity = 82/210 (39.05%), Postives = 117/210 (55.71%), Query Frame = 0
Query:   10 SQVRAELEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGY-SVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            +++   ++ EG+ LD L+N  KV+ +  +L+    E+ T+  D EK        +KLQ  + +EKR VMQ WL+ +F+ Q      +G  ++   VP    VPL  + LGFW  WLFTIPALRARK   K EKSALN +FL I + NV  P  TK    IWT D+ ++   Y Y    +Y +    GG +   +  IKG L++ DWGSW+
Sbjct:   63 ARIEKRVKDEGVPLDILMNPAKVLDIEARLE---LEANTI-SDEEK--------EKLQASLIKEKRMVMQDWLRNVFLVQGWGSAAIGGIMASGHVPFVPDVPLGARVLGFWLIWLFTIPALRARK-PAKWEKSALNFAFLGIILANVITPFFTKEPLTIWTMDMVIMGLCYGY----AYNASSADGGGIASPK--IKGALRWFDWGSWK 253          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S2TND9 (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TND9_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 1.260e-32
Identity = 77/204 (37.75%), Postives = 126/204 (61.76%), Query Frame = 0
Query:   16 LEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGY-SVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            ++ +G+ LD+L+N  K + L ++L    +E +T     E  + +Q +I +    +  EKR VM+  LK +F+ Q+L  +VV   L+ +  PGY  +P+  QALGFWT WLFTIP+LRARK   + EK ALN++FLA P++N+ +P+V K+ G+IW A+V  +A  Y + F   ++   ++  + L+    I G+ ++LDWG+ R
Sbjct:   99 MKEQGVALDQLMNPMKAIRLYKELAEKTQELETT--SGEALETLQMEIQETTAKLNIEKRSVMREELKAVFLIQSLLSIVVSGLLATNHFPGYPDLPIAAQALGFWTIWLFTIPSLRARK-PAEVEKQALNVAFLATPLLNLAIPSVAKDPGLIWAANVVAIALSYAWAFI--FVDETDAAEAGLK----IGGMARWLDWGTGR 293          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S3EKL0 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKL0_9RHOD)

HSP 1 Score: 125 bits (313), Expect = 1.050e-31
Identity = 80/210 (38.10%), Postives = 119/210 (56.67%), Query Frame = 0
Query:   10 SQVRAELEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGY-SVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            ++V   ++ EG+ LD L+N  KV+ L  +L+ L+ +S T           +++ +KL+  + +EKR VMQ WL+ +F+ Q      +G  ++   VP    VPL  + LGFW  WLFTIPALRARK   K EKSALN +FL I + NV  P  TK    +WT D+ ++   Y Y    SY +  + G ++   +  IKG L++ DWGSW+
Sbjct:   60 AKVEQRVKDEGVPLDVLMNPAKVLDLEARLE-LEADSLT-----------EEEREKLKATLIKEKRMVMQDWLRNVFLVQGWGSAAIGGIMASGHVPFVPDVPLGARVLGFWLIWLFTIPALRARK-PAKWEKSALNFAFLGIILANVITPFFTKEPLTLWTIDMAIMGICYGY----SYNASSKDGDAIASPK--IKGALRWFDWGSWK 250          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S4P370 (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P370_GUITH)

HSP 1 Score: 125 bits (313), Expect = 1.070e-30
Identity = 80/217 (36.87%), Postives = 127/217 (58.53%), Query Frame = 0
Query:   12 VRAELEAE-GINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGYS-VPLVGQALGFWTTWLFTIPALRARKGT--------TKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGAIKGILKYLDWGSWR 218
            +R EL+AE G+ L++LLN  KVVSL +K+   + E + L    E+   +++ +  LQ ++++E++ +M  WLK +F  QAL  +++G  L+++  P    VP+  +A GFWT WLFTIP+LRA K             EK ALN++F+  P+  + LP  TK+ G+I++ ++ VLA  Y  Y           G S + ++  IKG LKYLD+G+ R
Sbjct:  146 IRQELKAEYGVELEDLLNPIKVVSLEKKILKAKEEVEGLA--GEERAALERDLMSLQAELSKERKAIMMDWLKLVFRGQALISIIIGGALAWNVFPLIDDVPIAARAFGFWTMWLFTIPSLRAVKPLGYPELGIKPGVEKKALNLAFVITPLTTILLPFATKDPGIIYSVNLLVLAACYGIYMVAG------EGESGMAKEVEIKGFLKYLDYGTGR 354          
BLAST of Ggra6461.t1 vs. uniprot
Match: A0A7S2UZ01 (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA)

HSP 1 Score: 119 bits (297), Expect = 6.990e-29
Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 0
Query:   17 EAEGINLDELLNGGKVVSLTRKLDGLQRESKTLLQDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFLSFDAVPGYS-VPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLAIPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLREQGA---IKGILKYLDWGSWR 218
            EA G+ LD+LLN GKVV+L R L  L +E + + QDS + + + K++++    +  EKR V+Q WLK LF+ QA+        + +DAVP    + L  + LGFW  WLFT+P+LRARK     EK+ALNI+F A P+ N+ LP  TK+   I+ A++ VL   Y Y F                       +K  ++ LD+GS R
Sbjct:   88 EANGVELDQLLNPGKVVNLERDLLKLSKELE-ICQDSTRIEEINKEMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAAD-EKTALNIAFGATPLTNLALPFFTKDPVTIYWANMAVLGLSYAYGFTLGSXXXXXXXXXXXXXSNLPDFLKAAIRALDYGSGR 291          
The following BLAST results are available for this feature:
BLAST of Ggra6461.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5911.460e-10169.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QH938.040e-8360.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2VTY82.360e-3843.35Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S4C3M21.980e-3742.06Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A1X6NZQ53.380e-3445.14Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0BLT01.030e-3239.05Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2TND91.260e-3237.75Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3EKL01.050e-3138.10Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S4P3701.070e-3036.87Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2UZ016.990e-2938.35Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 143..162
NoneNo IPR availableTMHMMTMhelixcoord: 112..130
NoneNo IPR availableTMHMMTMhelixcoord: 167..184
NoneNo IPR availableTMHMMTMhelixcoord: 85..102
IPR044966Protein RESISTANCE TO PHYTOPHTHORA 1, chloroplasticPANTHERPTHR36359PROTEIN RESISTANCE TO PHYTOPHTHORA 1, CHLOROPLASTICcoord: 79..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:180985..181641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6461.t1Ggra6461.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 180985..181641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6461.t1 ID=Ggra6461.t1|Name=Ggra6461.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MSAGKDPVESQVRAELEAEGINLDELLNGGKVVSLTRKLDGLQRESKTLL
QDSEKYDVVQKKIDKLQNDITREKRQVMQTWLKQLFIFQALAFLVVGAFL
SFDAVPGYSVPLVGQALGFWTTWLFTIPALRARKGTTKAEKSALNISFLA
IPIVNVCLPAVTKNCGVIWTADVFVLAGFYVYYFARSYLSPQESGGSLLR
EQGAIKGILKYLDWGSWR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044966RPH1