Ggra6434.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6434.t1
Unique NameGgra6434.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Homology
BLAST of Ggra6434.t1 vs. uniprot
Match: A0A2V3IJ07 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ07_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 1.080e-33
Identity = 78/244 (31.97%), Postives = 122/244 (50.00%), Query Frame = 0
Query:    2 VPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHED-----------------TNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPRE----QARQGTEMWLGDSERFVLFVCRACSHFPI 224
            VPV+QLR+D+ PEL FP + +L Q+LWCP+  H +                 T   P P   WR V       LL   ++P+PT       +P  C+++P R+ E+P  +EL  I+ +  EQ+++WV ENA QD  A+  +  +     +   +   P +KVGG+ +++       C  C +KM HLL+ISS EYG     RW+P D+          + + + +GD +++   VC  C   PI
Sbjct:   73 VPVLQLRRDNFPELPFPASADLLQILWCPEDLHPEAALRPSQNVTEPLDDGFTLLLPLPTFRWRMVSQLSAQRLL--GEMPKPTVPVTNPHMPHECSLNPVRVTEFPLSEEL--ITASQLEQVENWVRENARQDFEAMN-IDPDSGATDFAMQFSVAPGSKVGGFEHFSQYRPEAKCPNCEAKMSHLLTISSSEYGENDAKRWHPYDQNGSVLPLDYDECSGICIGDLDQYFAHVCLRCEERPI 311          
BLAST of Ggra6434.t1 vs. uniprot
Match: A0A1Q5MDH0 (Uncharacterized protein n=2 Tax=Streptomyces sp. CB00455 TaxID=1703927 RepID=A0A1Q5MDH0_9ACTN)

HSP 1 Score: 131 bits (329), Expect = 1.470e-33
Identity = 77/237 (32.49%), Postives = 112/237 (47.26%), Query Frame = 0
Query:    1 MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTD--RFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPREQARQGTEMW-----------LGDSERFVLFVCRACSHFPI 224
            MVP++Q+ + D P + FPE K+L Q+LWCP  Y       P P+  WR             D +P P P  +  R   P PC VHPE++ EYP++   +++ D L ++ D+             GE GL     +Y     A P  K+GG+  WT D     C  CGS+M+HLL++SS E+ G     W P ++  ++   G + W           LGD+    +F CR C   PI
Sbjct:   68 MVPIVQIHRADAPGIPFPEGKDLLQVLWCP--YSHGEFCYPLPQVHWRDCS-------AVGDVLPTPEPAAELPRNWYPGPCVVHPEQVTEYPSWDLSDELRDVLRDRFDA-----------LSGETGL-----LYSYHLAAAPGIKLGGYPGWTQDPVWPDCEGCGSRMDHLLTVSSWEFDGESWRTWLPDEDRTDENEWGGQRWDGPAHNPAGLCLGDAGGVYIFECRTCPERPI 279          
BLAST of Ggra6434.t1 vs. uniprot
Match: DUF1963 domain-containing protein n=1 Tax=Streptomyces goshikiensis TaxID=1942 RepID=UPI001E42C67C (DUF1963 domain-containing protein n=1 Tax=Streptomyces goshikiensis TaxID=1942 RepID=UPI001E42C67C)

HSP 1 Score: 128 bits (322), Expect = 4.170e-33
Identity = 76/235 (32.34%), Postives = 113/235 (48.09%), Query Frame = 0
Query:    1 MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPREQARQGTEMW-----------LGDSERFVLFVCRACSHFPI 224
            MVP++Q+ + D P + FPE  +L Q+LWCP   H +  Y P P+  WR     D + + +    P P     +   P PC VHPE++ EYP++   +++ D L ++ D+            LGE GL     + E      P  K+GG+  WT D     C  CGS+MEHLL++SS E+ G     W P ++  ++   G + W           LGD+    +F CR C   PI
Sbjct:   13 MVPIVQVHRADAPGIPFPEGTDLLQVLWCP-YAHGEFCY-PLPQVHWR-----DSSAVGEVLPTPEPAAELPKDWYPGPCVVHPEQVTEYPSWDLPDELRDVLRDRFDA-----------LLGEAGLRYSYHLAE-----APGIKLGGYPGWTQDPVWPDCEGCGSRMEHLLTVSSWEFDGESWRTWLPDEDRADKNEWGGQRWEGDAHNPAGLCLGDAGGVYIFECRTCPERPI 224          
BLAST of Ggra6434.t1 vs. uniprot
Match: DUF1963 domain-containing protein n=1 Tax=unclassified Nocardiopsis TaxID=2649073 RepID=UPI0019157EA6 (DUF1963 domain-containing protein n=1 Tax=unclassified Nocardiopsis TaxID=2649073 RepID=UPI0019157EA6)

HSP 1 Score: 128 bits (321), Expect = 2.860e-32
Identity = 79/238 (33.19%), Postives = 114/238 (47.90%), Query Frame = 0
Query:    1 MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPL-TDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDE---------PR----EQARQGTEMWLGDSERFVLFVCRACSHFPI 224
            +VPV+Q+ ++D P + FPE ++L Q+LWCP + H +  Y P PR  WR        + + P +   P P      ++P PCAVHPER+ EYP      ++   L E+ D   A           + GLE     YE      P  K+GG+  WT D     C  CG +MEHLL+++S EYGG     W P ++         PR       R+   + LGD+    +F CR+C   P+
Sbjct:   77 LVPVVQVHREDAPGVPFPEGRDLLQVLWCPFE-HGEFAY-PLPRVYWR------AADAVGPVRATPPAPSGAPPDSVPDPCAVHPERVTEYPGRDLPPELFRALRERFDRLEA-----------DTGLE-----YEYHLAEAPGIKLGGYPGWTQDPVWPDCASCGQRMEHLLTVASWEYGGDSWRTWLPAEDRAVVDGEEAPRPGRGRPVREAAGLMLGDAGGVYVFECRSCPGRPV 290          
BLAST of Ggra6434.t1 vs. uniprot
Match: A0A7I8EEB5 (Uncharacterized protein n=1 Tax=Ktedonobacteria bacterium brp13 TaxID=2717365 RepID=A0A7I8EEB5_9CHLR)

HSP 1 Score: 129 bits (323), Expect = 3.290e-32
Identity = 86/232 (37.07%), Postives = 115/232 (49.57%), Query Frame = 0
Query:    2 VPVIQLRKDDVPELGFPEAKNLFQLLWCP-DQYHEDTNY-GPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPR-------EQARQGTEMWLGDSERFVLFVCRACSHFPI 224
            V VIQLR  DVPELGFPE  +LFQLLWCP D  HE+ +Y GP  R  WR  Q    +E+L+   V   + + +   +P+ C   PER ++YP   ++  +   L  +I SW    A Q               IY    GA P  K+G  V W  D  L  C  C  +MEHLL+++S E+ G    RW P++EP        +       + LGD+    LFVCR C  +PI
Sbjct:  119 VGVIQLRAADVPELGFPEGCDLFQLLWCPRDHGHEEYSYWGPECRVYWR--QSSTISEVLKEQPV---STIFNPDYMPQVCQFIPERAQDYP---DIFALPKELQYRIWSWQETEAAQGY-------------IYGSHLGAAPGMKIGDNVEWIQDPWLPPCPSCQQEMEHLLTVASCEWDGESFRRWRPLEEPPLAHGVPLQNGHADAGIVLGDAGNIYLFVCRRCPGWPI 329          
BLAST of Ggra6434.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Nocardiopsis valliformis TaxID=239974 RepID=UPI000475B36D (hypothetical protein n=1 Tax=Nocardiopsis valliformis TaxID=239974 RepID=UPI000475B36D)

HSP 1 Score: 125 bits (315), Expect = 2.100e-31
Identity = 80/232 (34.48%), Postives = 113/232 (48.71%), Query Frame = 0
Query:    2 VPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFA-IPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDE---------PREQARQGTEMWLGDSERFVLFVCRACSHFP 223
            VPV+QL ++D P + FP  K+L Q+LWCP  +     Y P PR  WR       T  L   +   P P   R   +P PC VHPE + +YP++   E +SD L+E+      E  E+      E G + +D++ E      P  K+GG+  WT D     C  CG  MEHLL++SS+EY G   S W P+++          R Q ++   + LGD     +F CR C   P
Sbjct:   80 VPVVQLHRNDAPGVEFPPGKDLLQVLWCP--FDPPGLYCPLPRVYWR------TTASLGEVRSTPPAPDGARAEHVPAPCVVHPEPVVDYPSWDLPEDLSDQLSERF-----EQLEK------ETGWQYEDELAE-----APGIKMGGYPSWTQDPLWPECEGCGETMEHLLTVSSVEYDGDGSSTWIPVEDRDGGDLDVRDRVQLQRPHGLMLGDMGGVYVFECRTCPDRP 287          
BLAST of Ggra6434.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Microbispora sp. GMKU363 TaxID=718014 RepID=UPI0006E12FC8 (hypothetical protein n=1 Tax=Microbispora sp. GMKU363 TaxID=718014 RepID=UPI0006E12FC8)

HSP 1 Score: 124 bits (310), Expect = 2.130e-31
Identity = 80/232 (34.48%), Postives = 111/232 (47.84%), Query Frame = 0
Query:    1 MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFA-------IPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYW-THDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPI-------DEPREQ-ARQGTEMWLGDSERFVLFVC 216
            M+ V Q  K D+PE+ FPE K+L QLLWCP+++ +   +GP  + +WRH    D T++      P    L    A       +PRPC +HPER+ EYP  +EL      L   +D W AE              EGD   Y+      P  K+GGW  W   D+    C  CG++ E LL ++S E+ GG   RW P+       DEP  Q A + T + LG      +F+C
Sbjct:    1 MLGVAQFFKRDIPEIPFPEGKDLLQLLWCPNEHQQQDIWGPAIQLIWRHTA--DLTDVATGPAGPDVAALRSDMATIAGEYYLPRPCVLHPERVTEYPYSEEL---PADLEAALDEWDAET-------------EGD---YQCLLSIAPGCKIGGWESWHLTDMYELPCNVCGTETEPLLKLASSEWDGGSGPRWQPLEERHLTSDEPEYQDAHEPTALNLGRWGALTIFLC 211          
BLAST of Ggra6434.t1 vs. uniprot
Match: A0A7W3MWF0 (Uncharacterized protein n=1 Tax=Thermomonospora cellulosilytica TaxID=1411118 RepID=A0A7W3MWF0_9ACTN)

HSP 1 Score: 125 bits (313), Expect = 4.610e-31
Identity = 83/237 (35.02%), Postives = 115/237 (48.52%), Query Frame = 0
Query:    1 MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQPDQVPRPTPL---TDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDE---------PREQA-RQGTEMWLGDSERFVLFVCRACSHFPI 224
            +VP++QL   DVPEL FP   ++ Q+LWCP  +  D  Y P  +  WR     D   + +P   P P  L    D + +PRPCA+ PER+ E+P Y +L+     LA +I +W             E  +E   + +       P TKVGGWV+W  D    TC ECG  +EHLL+I+S E  G     W P +E         PR +  R+  ++ +GD     LF C  C H PI
Sbjct:   83 LVPILQLFARDVPELPFPAGTDVCQVLWCPLDH--DPLYCPDVQVRWR-----DSASITRPRTEPPPVDLEYSADNY-LPRPCALAPERVTEFPHYSDLD---PELARRITAW-------------EEQIERRWRYHYHL-SVAPGTKVGGWVHWIQDPIWLTC-ECGHALEHLLTIASGESDGQSWKTWTPAEEHPGMDANGRPRRRLDRRPADLMIGDVGDVYLFTCPQCEHRPI 293          
BLAST of Ggra6434.t1 vs. uniprot
Match: A0A2V3IMB3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMB3_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 5.800e-31
Identity = 82/236 (34.75%), Postives = 125/236 (52.97%), Query Frame = 0
Query:    2 VPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHVQHEDGTELLQP--DQVPRPTP-LTDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVS---LCTCTECGSKMEHLLSISSLEYGGGLVS-RWYPIDEPREQ-------ARQGTEMWLGDSERFVLFVCRACSHFP 223
            VP++QL+K DVPEL FP   +LFQLLWC +  HE  +  P     WR        + + P  D++P  +P + +   IPR CAV PER+ E    Q      +T +E ID W+  +A +D  A+G +    +D  Y   + A P+TK+GG+  +  D+    +  C EC SKM + L++SS + G G    RW P D  R++       A  GT++ LGD+    +++C++C   P
Sbjct:   66 VPILQLKKKDVPELIFPGEMDLFQLLWCGED-HEGESADPLTHVFWRKA------DAIGPLLDEMPATSPDIYNTSHIPRECAVFPERVVECDPAQ-----PNTDSELIDEWLRIHATEDFEAIGLIESYRED-AYLSQFAAAPSTKIGGFPSYIQDMEEQDIPVC-ECSSKMRYFLTVSSRDIGDGCSHYRWAPSDIERDENHCPKHAAFYGTDLCLGDAGSVYVYICQSCPSMP 287          
BLAST of Ggra6434.t1 vs. uniprot
Match: D6TXT2 (Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 TaxID=485913 RepID=D6TXT2_9CHLR)

HSP 1 Score: 125 bits (314), Expect = 5.850e-31
Identity = 85/235 (36.17%), Postives = 116/235 (49.36%), Query Frame = 0
Query:    2 VPVIQLRKDDVPELGFPEAKNLFQLLWCP-DQYHEDTNY-GPYPRCVWRHVQHEDGTELLQPDQVPRPTPLTDRFAIPRPCAVHPERMEEYPAYQELEQISDTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWVYWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPR----------EQARQGTEMWLGDSERFVLFVCRACSHFPI 224
            V VIQLR  DVPELGFPE  +LFQLLWCP D  HE+ +Y GP  R  WR  Q    +E+L+   VP    + D   +P+ C   PER+++YP   ++  + + L  +I +W    A Q           G    Y +   A P  K+G  V W  D     C  C  +MEHLL+++S E+ GG    W P++EP           +       + LGD+    LFVCR C  +PI
Sbjct:  109 VGVIQLRVADVPELGFPEGCDLFQLLWCPRDHDHEEYSYYGPECRVYWR--QSSTISEVLKEQPVPA---IFDPHYMPQVCQFIPERIQDYP---DVFALPEELQYRIWNWEETEAAQ-----------GHVYGYPD---AAPGMKIGENVDWIQDPWFPPCPSCRQEMEHLLTVASWEWDGGSFRWWRPLEEPPLAHGVPLQDGQDTNDDAGITLGDAGNIYLFVCRRCPGWPI 321          
The following BLAST results are available for this feature:
BLAST of Ggra6434.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ071.080e-3331.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1Q5MDH01.470e-3332.49Uncharacterized protein n=2 Tax=Streptomyces sp. C... [more]
DUF1963 domain-containing protein n=1 Tax=Streptomyces goshikiensis TaxID=1942 RepID=UPI001E42C67C4.170e-3332.34DUF1963 domain-containing protein n=1 Tax=Streptom... [more]
DUF1963 domain-containing protein n=1 Tax=unclassified Nocardiopsis TaxID=2649073 RepID=UPI0019157EA62.860e-3233.19DUF1963 domain-containing protein n=1 Tax=unclassi... [more]
A0A7I8EEB53.290e-3237.07Uncharacterized protein n=1 Tax=Ktedonobacteria ba... [more]
hypothetical protein n=1 Tax=Nocardiopsis valliformis TaxID=239974 RepID=UPI000475B36D2.100e-3134.48hypothetical protein n=1 Tax=Nocardiopsis vallifor... [more]
hypothetical protein n=1 Tax=Microbispora sp. GMKU363 TaxID=718014 RepID=UPI0006E12FC82.130e-3134.48hypothetical protein n=1 Tax=Microbispora sp. GMKU... [more]
A0A7W3MWF04.610e-3135.02Uncharacterized protein n=1 Tax=Thermomonospora ce... [more]
A0A2V3IMB35.800e-3134.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
D6TXT25.850e-3136.17Uncharacterized protein n=1 Tax=Ktedonobacter race... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availableGENE3D2.30.320.10coord: 1..219
e-value: 1.7E-11
score: 46.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:219576..220265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6434.t1Ggra6434.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 219576..220265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6434.t1 ID=Ggra6434.t1|Name=Ggra6434.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
MVPVIQLRKDDVPELGFPEAKNLFQLLWCPDQYHEDTNYGPYPRCVWRHV
QHEDGTELLQPDQVPRPTPLTDRFAIPRPCAVHPERMEEYPAYQELEQIS
DTLAEQIDSWVAENAEQDLVALGELGLEGDDKIYEECWGACPNTKVGGWV
YWTHDVSLCTCTECGSKMEHLLSISSLEYGGGLVSRWYPIDEPREQARQG
TEMWLGDSERFVLFVCRACSHFPIRGKLG*
back to top