Ggra6412.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A2V3J662 (HIV Tat-specific factor 1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J662_9FLOR) HSP 1 Score: 330 bits (846), Expect = 3.090e-109 Identity = 174/292 (59.59%), Postives = 227/292 (77.74%), Query Frame = 0
Query: 45 SHAARTSPRQSAAEQREXXXXXXXXXXXASRLRNLPNTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKART----DTGAARVGSE---APRVSRHLFVREKMSWDDDEGNQQSAP--NASRIVILKNVFHPDKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLEQSEAN 327
S + +P + AE+R XXXXXXXXXX A+ RN PNTS+Y++ LPPDVT D+L FCAKCGIL+PD TG AR+KIYRDE+G+ KGDAL TYALRPSV NA+++LDGA LR+ + V+EA+F+HK+ RT D ARV S APR+S +V+EKMSWDD++ N ++ +ASRIVILKNVF DKADY+L++EDM++GC + G+++++TVFE N G VAVKF+SI+SCL+CIQVMNGRWYDGR+LSAQ YDG TDYR++E++A+REER+R W +WLE +N
Sbjct: 19 SKSLEAAPESATAEKRXXXXXXXXXXXAAASQRNRPNTSIYISDLPPDVTHDQLETFCAKCGILVPDPRTGRARIKIYRDEQGRVKGDALATYALRPSVLNAVEILDGALLREGGPAVRVAEASFDHKQPRTQRSADVSEARVESAQEAAPRLSVRDYVQEKMSWDDEDNNAANSKLSSASRIVILKNVFDADKADYQLIREDMQEGCEQIGDVEKITVFEGNEHGVVAVKFRSIESCLRCIQVMNGRWYDGRRLSAQIYDGRTDYRHRESDANREERERNWKEWLESDSSN 310
BLAST of Ggra6412.t1 vs. uniprot
Match: R7Q6P5 (Similar to HIV TAT specific factor 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P5_CHOCR) HSP 1 Score: 273 bits (699), Expect = 3.310e-86 Identity = 136/242 (56.20%), Postives = 176/242 (72.73%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREKMSWDDDEGNQQSAPNASRIVILKNVFHPDKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLE 322
NTSVYVTGLP DVT ELA + KCGI+LP A TGL RVK+Y DE G KGD LVTYA++PSV+NA+ LLD A +R P+ V ATF+HK+ G S PR V+E +SW + EG Q +RIVILKNVF ADY +++EDME+GC CG ++++TVFERN EGA+AVKF S+++C++CI+VMNGRWYDGR+LSA+FYDG +D+RYKETE ++ ER+++W +WLE
Sbjct: 131 NTSVYVTGLPADVTEQELADYFTKCGIILPSAETGLPRVKLYTDENGDFKGDGLVTYAMQPSVENAVTLLDNAPIRPGGTPIGVQAATFDHKQEWD--GKRHKSSFRPRE----LVQEALSWAE-EG--QEVAKTTRIVILKNVFGAKDADYNVIREDMEEGCGACGTVEKITVFERNAEGAIAVKFASLEACVECIKVMNGRWYDGRKLSAEFYDGVSDFRYKETEEEKSEREKRWQEWLE 363
BLAST of Ggra6412.t1 vs. uniprot
Match: M2Y425 (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y425_GALSU) HSP 1 Score: 211 bits (538), Expect = 8.410e-62 Identity = 117/254 (46.06%), Postives = 164/254 (64.57%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLR-DSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLF-----VREKMSWDD--DEGNQQSAPNASRIVILKNVFHPDKA-----DYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWL 321
NTSVY TG+P D T +E+ F +KCGIL DA++G A+VK+YRD+ G KGD +VTYAL+PSV+NA ++LD R + + + A FE K G + + P + LF + +K SW+D D+G RIVILK VF P +A Y+ +++DM + C++ GE++++TVFERN EG VAV+F+S + CI++M GRWY GRQL A+FYDG TDYRYKETE +R+ER +K+ +WL
Sbjct: 142 NTSVYFTGIPSDATEEEVVEFFSKCGILKVDAYSGKAKVKLYRDKLGYLKGDGVVTYALQPSVENAFKVLDQTEFRFGTGTRIHLEPARFELK------GEDFIPRKVPNTGKPLFSTKQLIEQKTSWNDGVDDGR------GLRIVILKKVFEPKEALTDPHYYEDIRKDMLEECSKLGEIEKLTVFERNPEGVVAVRFRSPAAAESCIELMTGRWYGGRQLEAEFYDGKTDYRYKETEEERKERIKKFEEWL 383
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A7S3A676 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A676_9RHOD) HSP 1 Score: 195 bits (496), Expect = 2.020e-55 Identity = 109/249 (43.78%), Postives = 162/249 (65.06%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREK-MSWDD--DEGNQQSAPNASRIVILKNVFHPDK----ADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLE 322
N+SVY G+PPD T +E+ + +KCGI+ PD TG A+VK+YRDE+ Q KGD +VTY +PSVDNA+ LLDGA + + L V +A F K + ++ +R + + H +++K + W++ D+G RIVILK+ F P++ DY+ ++EDME C++ GE+++VTVF N EG VAVKFK S CI+VMN R++DGR+L A F+DG +D+R KET+ R++R+ W ++LE
Sbjct: 171 NSSVYFAGIPPDSTEEEVENYFSKCGIVKPDPDTGKAKVKLYRDEKDQLKGDGVVTYLQKPSVDNAVLLLDGAEFKPG-WKLEVRKAEF---KIKGNSYISRPKRQKGVANAHQALKQKALGWNEGVDDGR------GLRIVILKHCFDPNQMTNPTDYEDLREDMEIECSKMGEVEKVTVFNGNSEGVVAVKFKQPASAESCIEVMNERFFDGRKLEAGFFDGKSDFRVKETDEQRKKREESWAKYLE 409
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A6B2LD64 (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LD64_9EUKA) HSP 1 Score: 180 bits (457), Expect = 4.080e-51 Identity = 96/247 (38.87%), Postives = 149/247 (60.32%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRD-SRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREKMSWDDDEGNQQSAPNASRIVILKNVFHPDKAD-----YKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWL 321
N ++YVTGLP DVT +E FC G++ D T L ++KIY+D++G KGDA+V++ PS+DNA +LLDG R + + A FE+K + A + + R ++ ++ W+D E R VI+K++F P A+ Y+ +++++ A G++D + +FERN EG VAVK+K KCI++MNGRW+DGRQLSA FYDG+++Y ET+ +EER+++W +WL
Sbjct: 18 NFTLYVTGLPKDVTDEEFIKFCTTAGVIAKDPVTRLPKIKIYKDDQGVPKGDAIVSFLKAPSIDNAFKLLDGFDFRPPENHVVKLELAKFENKPFKPKPKTAPLSKKQKRYNQE---EAELGWEDKE---------QRHVIIKHMFDPRVAEKDFSFYENLEKEIAVEFARIGQVDALKIFERNEEGVVAVKYKYEYDAEKCIEIMNGRWFDGRQLSAAFYDGYSNYFVAETDEQKEEREKQWDKWL 252
BLAST of Ggra6412.t1 vs. uniprot
Match: L8HD55 (RNA recognition motif domain containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HD55_ACACA) HSP 1 Score: 175 bits (443), Expect = 5.200e-48 Identity = 107/252 (42.46%), Postives = 157/252 (62.30%), Query Frame = 0
Query: 82 TSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAAR------VGSEAPRVSRHLFVREKMSWDDDEGNQQSAPNASRIVILKNVFHPDKAD-----YKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLE 322
T+VYV+GLP D+T +EL F AKCGI+ D +G +VK+Y DE+G+ KGDALV Y R SVD ALQLLD + +R + V+EA FE+K D+ A+ VG + + + E++SW + E R VI+KN+F P++A Y ++ D+ + + GE++ +TVFERN EG VA+KF ++ +KC++VMNGR++ RQL A++YDG T+Y+ KETEAD++ R + WLE
Sbjct: 123 TTVYVSGLPLDMTKEELLPFMAKCGIVRKDPDSGEYKVKLYEDEQGRLKGDALVVYFKRESVDLALQLLDESEIRPGCV-VRVTEAKFENKP---DSEQAKPKAKKPVGKKKQKKKVRINQEEELSWVEWE--------TRRHVIIKNMFSPEEAIGDDEFYPDLKNDVREEVEKFGEVEVLTVFERNPEGVVAIKFVEPEAAVKCLEVMNGRFFAKRQLVAEWYDGVTNYKVKETEADQKHRLDAFGDWLE 362
BLAST of Ggra6412.t1 vs. uniprot
Match: HIV Tat-specific factor 1 n=1 Tax=Dromiciops gliroides TaxID=33562 RepID=UPI001CC36179 (HIV Tat-specific factor 1 n=1 Tax=Dromiciops gliroides TaxID=33562 RepID=UPI001CC36179) HSP 1 Score: 174 bits (441), Expect = 4.030e-47 Identity = 96/248 (38.71%), Postives = 149/248 (60.08%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREK-MSWDDDEGNQQSAPNASRIVILKNVFHP-----DKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLE 322
NT+VYV+GLPPD+T DE +K GI++ D T +VK+Y+D++G KGD L Y R SVD AL+LLD +R R L V +ATF+ K + A + + + L +++K + W ++ + R+VI+KN+FHP D ++ED+ CA+ G++ +V +F+R+ +G V+V +K + CIQ +NGRW+ GRQL+A+ +DG TDY+ +ET +REER + W +LE
Sbjct: 140 NTNVYVSGLPPDITKDEFVQLMSKFGIIMKDPQTEEYKVKLYKDKQGNLKGDGLCCYLKRESVDLALKLLDDDVIRGCR--LHVEKATFQLKG---EYDATKKKKKCKDYKKKLSLQQKQLDWRPEKNIGTTRMRHERVVIIKNMFHPKDFEEDPLVLNEIREDLRTECAKFGQVKKVLLFDRHPDGVVSVSYKEPEEADVCIQALNGRWFGGRQLNAEAWDGVTDYQVEETSREREERLKCWESFLE 382
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A4X2LCD4 (Uncharacterized protein n=3 Tax=Diprotodontia TaxID=38609 RepID=A0A4X2LCD4_VOMUR) HSP 1 Score: 170 bits (430), Expect = 2.190e-45 Identity = 91/248 (36.69%), Postives = 147/248 (59.27%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREK-MSWDDDEGNQQSAPNASRIVILKNVFHP-----DKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLE 322
NT+VYVTGLPPD+T DE +KCGI++ D T ++K+Y+D++G KGD L Y + SVD AL+LLD +R R L V +A F+ K + A++ + + L +++K + W ++ + R+VI++N+FHP D ++ED+ C + G++ +V +F+R+ +G +V +K + CIQ +NGRW+ GRQL+ + +DG TDY+ +ET +REER + W +LE
Sbjct: 138 NTNVYVTGLPPDITKDEFVQLMSKCGIIMKDPQTEEYKIKLYKDKQGNLKGDGLCCYLKKESVDLALKLLDDDEIRGYR--LHVEKAKFQLKG---EYDASKKKKKCKDYKKKLSLQQKQLDWRPEKKTGTARMRHERVVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLLFDRHPDGVASVSYKEPEEADLCIQALNGRWFGGRQLNVEVWDGVTDYQVEETSREREERLKGWESFLE 380
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A151N7N7 (HIV Tat-specific factor 1 n=5 Tax=Crocodylia TaxID=1294634 RepID=A0A151N7N7_ALLMI) HSP 1 Score: 169 bits (427), Expect = 6.870e-45 Identity = 96/262 (36.64%), Postives = 150/262 (57.25%), Query Frame = 0
Query: 81 NTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREK-MSWDDDEGNQQSAPNASRIVILKNVFHP-----DKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLEQSEANQQTQTQSLN 336
NT+VYVTGLPPDVT DE +KCGI++ D T ++K+Y+D+ G KGD L Y R SV AL+LLD A +R + L V A F+ K + A++ + + + ++K + W ++ + + R++I++N+FHP D ++ED+ C + G++ +V +F+R+ +G +V FK CIQ +NGRW+ GRQLS + +DG TDY+ +ET +REER + W +LE +A+ Q T N
Sbjct: 142 NTNVYVTGLPPDVTKDEFIQVMSKCGIIMLDPQTDEPKIKLYKDKEGNLKGDGLCCYLKRESVGLALRLLDEAEIRG--YKLHVEVAKFQLKG---EYDASKKRKKCKDYRKKMSQQQKQLDWRPEKKDATARMRHERVIIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEADEADLCIQALNGRWFGGRQLSVEPWDGVTDYQIEETSREREERLKGWGSFLEDPDASGQKTTSDAN 398
BLAST of Ggra6412.t1 vs. uniprot
Match: A0A093P817 (HIV Tat-specific factor 1 (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A093P817_PYGAD) HSP 1 Score: 167 bits (423), Expect = 6.960e-45 Identity = 103/299 (34.45%), Postives = 159/299 (53.18%), Query Frame = 0
Query: 40 TRGDASHAARTSPRQSAAEQREXXXXXXXXXXXASRLRNLPNTSVYVTGLPPDVTADELAAFCAKCGILLPDAHTGLARVKIYRDERGQAKGDALVTYALRPSVDNALQLLDGACLRDSRFPLSVSEATFEHKKARTDTGAARVGSEAPRVSRHLFVREK-MSWDDDEGNQQSAPNASRIVILKNVFHP-----DKADYKLVQEDMEDGCAECGELDRVTVFERNGEGAVAVKFKSIQSCLKCIQVMNGRWYDGRQLSAQFYDGHTDYRYKETEADREERDRKWHQWLEQSEANQQTQT 332
T G A PRQ+ +Q+ RN T+VYVTGLPPD+T DE +KCGI++ D T ++K+Y+D+ G KGD L Y R SV AL+LLD A +R + L V A F+ K + A++ + + L ++K + W ++ + + RI+I++N+FHP D ++ED+ C + G++ +V +F+R+ +G +V FK C +NGRW+ GRQLSA+ +DG TDY+ +ET +REER + W +LE +A +Q T
Sbjct: 40 TSGTQPSANEKGPRQTEPKQKAEKRKLEPGWFHVEEDRN---TNVYVTGLPPDITKDEFIQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRG--YKLHVEVAKFQLKG---EYDASKKKKKCKDYRKKLSQQQKQLDWRPEKKDGATRMRHERIIIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWGSFLEDPDAKEQQTT 330 The following BLAST results are available for this feature:
BLAST of Ggra6412.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6412.t1 ID=Ggra6412.t1|Name=Ggra6412.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=345bpback to top |