Ggra6397.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6397.t1
Unique Name	Ggra6397.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	471

Homology

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BLAST of Ggra6397.t1 vs. uniprot
Match: A0A2V3J3E6 (PEROXIDASE_4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3E6_9FLOR)

HSP 1 Score: 684 bits (1766), Expect = 1.050e-244
Identity = 330/467 (70.66%), Postives = 370/467 (79.23%), Query Frame = 0

Query:    4 SLVFFCAILLLCSVNAQRPARQXXXXXXXXRPAAPGLSREALFGRARGLANAPGTPLNSAQRETARQRLQRLRGGIPDAEPGEEPNIEELYNPMRDARCFNAPYDTSVPQSKLSSLFSDYVKIFNWGFNMPPSSPIFSFSENGVTNNRFPGMCLRMAFHDNSIDPKFGEFSSYVTQRISVDNEWTGPNRFLETSGGDASVLTCRFERFHPNQNYDQTASRILFAFQTRIVPGLRGQSLMDKYQMSYADALHNCALAAVSWLNPGEGSSAKNQMRFGRKDACFVSGDARLAQDELSLDGKNPLCGPTELLPPVTFSAKQSNQWFTSRGLPARQWLSFMGTHTTFDNFGRTETLRRMPVPGDDYFTNYVGVPVHKPDVAAAEGDPENPGCDWIVNGEEKFWPMSQADCALGIDVISDDPGLDQLENVMNSYISAPASWIRSDLVCAMRLLGGRADERCDGTNPLFGSVY 470
            SL+ FCAILL+ +++AQR  R         R     L+R    GR RGL N PGTPLN+ +RET R+R QRL G IP+ E  EEPNIEE+YNPMRDA+CFNAPYD+S+P SK  SLFSDYV IF WGFNM  SS IFSFSENGVTNNRFPGMC+RMAFHDNS+DPKFG+F +Y+  RI+   EW GP RFLETSGGDASVLTCR ER HPNQNYDQTASRILFAFQT  VPGL GQSLMDKY+MSYADALHNCALAA+S+LNP +G  A ++MRFGRKDAC+ S D+ LA+D LS+DG NPLCGPTELLPPVTFSA +SN WFTSR +  R WLSFMGTHTTFDNFGR +TLR+MPVPG+DYFTNYVGVPVH PDV   E D E PGCDWIV G E FWPMSQADCALGIDVI     L QL++VMN YI+ PASWIR DL CAM  LGGR +E C G+  LFGSVY
Sbjct:    3 SLIIFCAILLVSTISAQRRGRGREPQNRRQRL----LTR---LGRPRGLENNPGTPLNTRRRETEREREQRLEGEIPEVEGEEEPNIEEIYNPMRDAKCFNAPYDSSIPSSKRKSLFSDYVNIFEWGFNMDESSQIFSFSENGVTNNRFPGMCMRMAFHDNSVDPKFGDFPTYIANRINALKEWVGPPRFLETSGGDASVLTCRIERLHPNQNYDQTASRILFAFQTTTVPGLNGQSLMDKYRMSYADALHNCALAAISFLNPRQGGGAVSRMRFGRKDACYFSEDSELAEDILSMDGNNPLCGPTELLPPVTFSASESNNWFTSRKMRERLWLSFMGTHTTFDNFGRNDTLRQMPVPGEDYFTNYVGVPVHSPDVKETEEDAELPGCDWIVKGVELFWPMSQADCALGIDVIDAQRSLRQLKSVMNGYIAKPASWIRRDLTCAMVQLGGRVNEGCGGSKSLFGSVY 462

The following BLAST results are available for this feature:

BLAST of Ggra6397.t1 vs. uniprot

BLAST of Ggra6397.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3E6	1.050e-244	70.66	PEROXIDASE_4 domain-containing protein n=1 Tax=Gra...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002016	Haem peroxidase	PFAM	PF00141	peroxidase	coord: 153..353 e-value: 2.0E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..87
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..470
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
IPR010255	Haem peroxidase superfamily	SUPERFAMILY	48113	Heme-dependent peroxidases	coord: 148..368

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000861_pilon	contig	tig00000861_pilon:194383..195795 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6397.t1	Ggra6397.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000861_pilon 194383..195795 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6397.t1 ID=Ggra6397.t1|Name=Ggra6397.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=471bp
MNLSLVFFCAILLLCSVNAQRPARQRPERLRPERPAAPGLSREALFGRAR
GLANAPGTPLNSAQRETARQRLQRLRGGIPDAEPGEEPNIEELYNPMRDA
RCFNAPYDTSVPQSKLSSLFSDYVKIFNWGFNMPPSSPIFSFSENGVTNN
RFPGMCLRMAFHDNSIDPKFGEFSSYVTQRISVDNEWTGPNRFLETSGGD
ASVLTCRFERFHPNQNYDQTASRILFAFQTRIVPGLRGQSLMDKYQMSYA
DALHNCALAAVSWLNPGEGSSAKNQMRFGRKDACFVSGDARLAQDELSLD
GKNPLCGPTELLPPVTFSAKQSNQWFTSRGLPARQWLSFMGTHTTFDNFG
RTETLRRMPVPGDDYFTNYVGVPVHKPDVAAAEGDPENPGCDWIVNGEEK
FWPMSQADCALGIDVISDDPGLDQLENVMNSYISAPASWIRSDLVCAMRL
LGGRADERCDGTNPLFGSVY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002016	Haem_peroxidase
IPR010255	Haem_peroxidase_sf