Ggra636.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra636.t1
Unique NameGgra636.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length305
Homology
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3IFY2 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY2_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 1.220e-96
Identity = 148/252 (58.73%), Postives = 185/252 (73.41%), Query Frame = 0
Query:    1 MADLQASSLHLVPCAIDDYFDIESEQGLYNLVQGILELKRMGDQDHDRAATFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRPDMAIGRLPTPKQRSEMPKSSRDIMFPKGHPPEMALEITSCDPKKDLETKPDLYRRAGVKRLHTLHRDKRGNGRNAFHRFQTLENGRYATETNPISNEPINDSDSCNLTSQQLMNPPSPDSRVRQNKAKQHFNTLNMQTKVKDAEKRAGKEKN 252
            M D  ASSLHL PC+++DYF+I +E G+Y+L++GIL +K M DQ+HDR A FW MTFN++KP +D+RVAML PSVEI       SN     S KPTVLRPDMAI +LP+ KQR   PK S+DIMFPKG+PP++ LE TSC+P KDL TKP +Y  +G   +HTLHRDKRGNGRNA ++ Q  ENG+  TET PISN+PIND D+  +TS+QLM+PPSPD  VRQNKAKQ   T  ++ K+  AE RA   +N
Sbjct:    1 MEDFDASSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEHDRGAAFWAMTFNNEKPEKDKRVAMLNPSVEISSDSTGNSN---KGSKKPTVLRPDMAIIKLPSDKQRRAAPKESQDIMFPKGYPPDLTLESTSCNPTKDLNTKPKMYLDSGAGSVHTLHRDKRGNGRNACYKIQKKENGQIVTETTPISNDPINDRDARKITSKQLMHPPSPDHNVRQNKAKQRAKTRVLRPKLNQAENRADGAEN 249          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3IG31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG31_9FLOR)

HSP 1 Score: 277 bits (708), Expect = 9.480e-88
Identity = 136/207 (65.70%), Postives = 162/207 (78.26%), Query Frame = 0
Query:   41 MGDQDHDRAATFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRPDMAIGRLPTPKQRSEMPKSSRDIMFPKGHPPEMALEITSCDPKKDLETKPDLYRRAGVKRLHTLHRDKRGNGRNAFHRFQTLENGRYATETNPISNEPINDSDSCNLTSQQLMNPPSPDSRVRQNKAKQHFNTLNMQTKVKDAEKRA 247
            MGDQDHDRA TFW MTFN+QKP EDRRVAMLTPSVEIP  EG+ SN  S+SS +PT  RPDMAIG LP P++R+++PKSSRD+MF  G PP MALE  S  P KDLE KP  YR+AGV+ LHTLHRD+RGNG+NAFHR Q L++G+Y TET PISNEPIND D+CN+TS+QLMN PSPD  V++NK KQ    L++  K  + + RA
Sbjct:    1 MGDQDHDRAETFWAMTFNNQKPPEDRRVAMLTPSVEIPLPEGSSSNDTSSSSRRPTATRPDMAIGTLPAPEERAKLPKSSRDVMFSAGRPPLMALETISSKPGKDLEKKPSSYRQAGVQTLHTLHRDRRGNGKNAFHRIQRLQDGQYETETRPISNEPINDPDACNITSKQLMNSPSPDRNVQENKRKQRAINLSLLRKADEKKSRA 207          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3J062 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J062_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 3.850e-70
Identity = 107/175 (61.14%), Postives = 133/175 (76.00%), Query Frame = 0
Query:    1 MADLQASSLHLVPCAIDDYFDIESEQGLYNLVQGILELKRMGDQDHDRAATFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRPDMAIGRLPTPKQRSEMPKSSRDIMFPKGHPPEMALEITSCDPKKDLETKPDLYRRAGVKRLHTLHRDKRGNGRNA 175
            M   +ASSLHL PC+++DYF+I +E G+Y+L++GIL +K M DQ+H R A FW MTFN++KP +D+RVAML PSVEI       SN     S KPTVLRPDMAIG+LP+ KQR  +PK S+DIMFPKG+PP + LE TSC+P KDL TKP +Y  +GV R+HTLHRDKRG GRNA
Sbjct:    1 MEGFEASSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEHGRGAAFWAMTFNNEKPEKDKRVAMLNPSVEISSDSTGNSN---KGSRKPTVLRPDMAIGKLPSDKQRRAVPKESQDIMFPKGYPPGLTLESTSCNPTKDLNTKPKMYLDSGVGRVHTLHRDKRGKGRNA 172          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3IGA6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA6_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 2.760e-49
Identity = 79/135 (58.52%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    1 MADLQASSLHLVPCAIDDYFDIESEQGLYNLVQGILELKRMGDQDHDRAATFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRPDMAIGRLPTPKQRSEMPKSSRDIMFPKGHPPEMAL 135
            M D +ASSLH  PC++++YF+I  E G+Y+L++G+L LK M DQ+HDR A  W MTFN++KP +D+RVAMLTPSVEIP +     N     S KPT LRPDMAIG+LPT K+R  + K S+DIMFPKGHPPE+ L
Sbjct:    1 MEDFEASSLHFRPCSLENYFNIAGENGVYDLIEGVLMLKEMEDQEHDRGAALWAMTFNNEKPEKDKRVAMLTPSVEIPSESTGNCN---KPSEKPTNLRPDMAIGKLPTAKERRALLKESQDIMFPKGHPPELTL 132          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3IMS6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMS6_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 2.270e-43
Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 0
Query:    1 MADLQASSLHLVPCAIDDYFDIESEQGLYNLVQGILELKRMGDQDHDRAATFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRPDMAIGRLPTPKQRSEMPKSSRDIMFPKG 128
            M D  +SSLHL PC+++DYF+I +E G+Y+L++GIL +K M DQ+ DR A FW M FN++KP +D+RVAML PSVEI       SN     S KP VLRPDMAIG+LP  KQR  +P+ S+DIMFPKG
Sbjct:    1 MEDFGSSSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEQDRGAAFWAMKFNNEKPEKDKRVAMLNPSVEISSDSTGNSN---KGSRKPIVLRPDMAIGKLPNDKQRRTVPQESQDIMFPKG 125          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3ICW7 (Uma2 domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW7_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 1.240e-14
Identity = 72/268 (26.87%), Postives = 129/268 (48.13%), Query Frame = 0
Query:    8 SLHLVPCAIDDYFDIES-EQGLYNLVQGILELKRMGDQDHDRAATFWMMTFNDQKPAED----RRVAMLTPSVEIPQQEGNRSNGASNSSTKP------------------TVLRPDMAIGRLPTPKQRSEMPKSSRDIMFP-KGHPPEMALEITSCDPKKDLETKPDLYRRAGVKRLHTLHRDKRGNGRNAFHRFQTLENGRYATETNPISNEP-INDSDSCNLTSQQLMNPPSPDSRVRQNKAKQHFNTLNMQTKVKDAEKRAGKE 250
            +LHL P  +++ FDI+  + G Y+LV+G+L  + M + + ++     ++ +  Q+  +D    RRVA L  ++ IP +    S+  S+S+  P                  +V+R D A+G   + + R+ +   S  I FP K  PPE+ +E TS + ++D+  K +LY +  + +  T+H D R            L NG+Y     P+  E  +N      L ++  ++P SPD+RV +   +Q         K ++AEK+  +E
Sbjct:   57 ALHLQPATVEELFDIDRFKYGEYDLVEGLLIWRGMSESNRNKEQAKHLL-YRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRM-------KREEAEKKRVEE 316          
BLAST of Ggra636.t1 vs. uniprot
Match: A0A2V3IBX3 (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX3_9FLOR)

HSP 1 Score: 63.9 bits (154), Expect = 6.680e-8
Identity = 57/212 (26.89%), Postives = 96/212 (45.28%), Query Frame = 0
Query:   59 DQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKP------------------TVLRPDMAIGRLPTPKQRSEMPKSSRDIMFP-KGHPPEMALEITSCDPKKDLETKPDLYRRAGVKRLHTLHRDKRGNGRNAFHRFQTLENGRYATETNPISNEP-INDSDSCNLTSQQLMNPPSPDSRVRQNKAKQHFNTLNMQTKVKDAEKRAGKE 250
            +Q     RRVA L  ++ IP +    S+  S+S+  P                  +V+R D A+G   + + R+ +   S  I FP K  PPE+ +E TS + ++D+  K +LY +  + +  T+H D R            L NG+Y     P+  E  +N      L ++  ++P SPD+RV +   +Q         K ++AEK+  +E
Sbjct:   22 EQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRM-------KREEAEKKRVEE 226          
The following BLAST results are available for this feature:
BLAST of Ggra636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IFY21.220e-9658.73Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IG319.480e-8865.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0623.850e-7061.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGA62.760e-4958.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMS62.270e-4357.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICW71.240e-1426.87Uma2 domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBX36.680e-826.89Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..238
IPR012296Nuclease, putative, TT1808GENE3D3.90.1570.10tt1808, chain Acoord: 12..188
e-value: 1.7E-9
score: 39.1
IPR008538Putative restriction endonucleasePFAMPF05685Uma2coord: 17..165
e-value: 7.7E-6
score: 25.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000243_piloncontigtig00000243_pilon:29063..30063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra636.t1Ggra636.t1Gracilaria gracilis GNS1m malemRNAtig00000243_pilon 29063..30063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra636.t1 ID=Ggra636.t1|Name=Ggra636.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=305bp
MADLQASSLHLVPCAIDDYFDIESEQGLYNLVQGILELKRMGDQDHDRAA
TFWMMTFNDQKPAEDRRVAMLTPSVEIPQQEGNRSNGASNSSTKPTVLRP
DMAIGRLPTPKQRSEMPKSSRDIMFPKGHPPEMALEITSCDPKKDLETKP
DLYRRAGVKRLHTLHRDKRGNGRNAFHRFQTLENGRYATETNPISNEPIN
DSDSCNLTSQQLMNPPSPDSRVRQNKAKQHFNTLNMQTKVKDAEKRAGKE
KNRADKEKDRADAAENEAKAAKKSLRELQEQLKAHTERDRLTFSPASEGL
EWVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012296Nuclease_put_TT1808
IPR008538Uma2