Ggra6349.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A2V3J3F1 (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F1_9FLOR) HSP 1 Score: 444 bits (1143), Expect = 6.750e-139 Identity = 237/278 (85.25%), Postives = 243/278 (87.41%), Query Frame = 0
Query: 1141 AATAAASRRHDLDGRQVEAKRAVPRSEGSSASAA-GHSASFAATPRGQRYNDGAAQGAP-QRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSCNQGGGRAGGGASQNEALPHSGPNGRGANAAAAAAVAYYSNYPASLAEQYGTYYNKPQWQQYYAAMGYNFNFPQSYNPYQQYLPAYMNTQASANGAGGSAGMPANAASPNAPGTG 1416
AATAAASRRHDLDGRQVEAKRAVPRSEGSSAS A GH+ SF A PRGQRYND A GAP RAHHTTKCK+FVGGLPSGCGGEEFR YFS+FGEV+DAQVMIDHNTGNSRGFGFVTFA+EATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKG SQDRRHNRDS NQG GRAG ASQN+ LPHSG NG AYYSNYPASLAEQYG YYN PQWQQYYAAMGYNFNFPQSYNPYQQYL AYMNTQASANG GGSA MPANAASPNAPG G
Sbjct: 165 AATAAASRRHDLDGRQVEAKRAVPRSEGSSASTAPGHNPSFPAAPRGQRYND--APGAPPHRAHHTTKCKVFVGGLPSGCGGEEFRAYFSQFGEVIDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGVSQDRRHNRDSYNQGAGRAGASASQNDGLPHSGANGXXXXXXXXXXXAYYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNFPQSYNPYQQYLQAYMNTQASANGTGGSAAMPANAASPNAPGAG 440
BLAST of Ggra6349.t1 vs. uniprot
Match: R7QHG3 (Putative Heterogeneous nuclear ribonucleoprotein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG3_CHOCR) HSP 1 Score: 280 bits (716), Expect = 1.080e-78 Identity = 161/255 (63.14%), Postives = 169/255 (66.27%), Query Frame = 0
Query: 1141 AATAAASRRHDLDGRQVEAKRAVPRSEGSSASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDS--CNQGGGRAGGGASQNEALPHSGPNGRGANAAAAAAVAYYSNYPASLAEQYGTYYNKPQWQQYYAAMGYNFN-FPQSYNPYQQYLPAYMNTQA 1392
AA AAASRRHDLDGRQVEAKRAVPR+EG AHHTTKCK+FVGGLPS CG +EFR YFS+FGEVVDAQVMIDHNTGNSRGFGFVTF SEATVN+VVGPGKSNTDHEIMGKCVEVKRAEPKGA DRR+NRD+ YSNYPASLAEQYG YYN PQWQQYYAAMGYNFN +PQ YNPYQQYL AYMN A
Sbjct: 207 AAGAAASRRHDLDGRQVEAKRAVPRNEG--------------------------------AHHTTKCKVFVGGLPSSCGPDEFRAYFSQFGEVVDAQVMIDHNTGNSRGFGFVTFGSEATVNSVVGPGKSNTDHEIMGKCVEVKRAEPKGAPNDRRNNRDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNAYPQGYNPYQQYLQAYMNNAA 429
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A7S0BEM5 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEM5_9RHOD) HSP 1 Score: 123 bits (309), Expect = 1.630e-28 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
Query: 1142 ATAAASRRHDLDGRQVEAKRAVPRSEGS--SASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKC-----KLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDR 1295
A + +H LDGRQV+AK AVPRS+ S S+S +G ++ + + ++ + P + H + K+FVGGLPS C + +FS FGEV DAQV+IDH TGNSRGFGFVTF EA + + G + H+I+GK VEVK+AEPK + + R
Sbjct: 16 ANKVTTMKHILDGRQVDAKHAVPRSDLSVISSSPSGTNSKKSISFPEKQVPEAEEASVPAKEHTSASDPALSKKIFVGGLPSQCRNGQLEEHFSAFGEVADAQVLIDHKTGNSRGFGFVTFEDEAAIAELFGSSDGSAHHDILGKVVEVKKAEPKQSLETR 176
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A1X6NYF8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYF8_PORUM) HSP 1 Score: 128 bits (322), Expect = 8.300e-27 Identity = 90/204 (44.12%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 1142 ATAAASRRHDLDGRQVEAKRAVPRSE------------------------------------------GSSASAAGHSASFAATP-------RGQRYNDGAA---------QGAPQRAHHTTKC-KLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRA 1286
A AS+RHDLDGRQVEAKRAVPR+E GS G SA + A P RG +D + G+P + H K+FVGGLPS C EEFR YFSRFG +V+AQVM DH TGNSRGFGFVT+A EA V A VG G+ HEIM K VEVKRA
Sbjct: 39 AAKVASQRHDLDGRQVEAKRAVPRNECAQPAFTPKASMFPRYPSDAGGGSSYPTSGGDXXXXXYGGTAGSGYGRVGSSAGYGAVPTAVVSGVRGGAMHDRGSGXXXXXXXRHGSPNTSMHVGGSRKIFVGGLPSACHNEEFRAYFSRFGTIVEAQVMFDHQTGNSRGFGFVTYADEAGVAAAVGVGRM---HEIMDKNVEVKRA 239
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A7S2ZPG2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZPG2_9RHOD) HSP 1 Score: 124 bits (312), Expect = 1.730e-26 Identity = 75/163 (46.01%), Postives = 94/163 (57.67%), Query Frame = 0
Query: 1142 ATAAASRRHDLDGRQVEAKRAVPRSEGSSAS----AAGHSASFAATPRGQRYNDGAAQGAPQ----RAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 1296
A + +H LDGRQV+AK AVPRS+ S+ S A S + Q A G P+ + K+FVGGLPS C + YFS FGEV DAQV+IDH TGNSRGFGFVTF EA + + G + H+I+GK VEVK+AEPK + + RR
Sbjct: 156 ANKVTTMKHVLDGRQVDAKHAVPRSDLSTVSSIPSATNSKKSNMSFTEKQASEAEEALGPPKDPTPASDPALSKKIFVGGLPSQCRNAQLEEYFSAFGEVADAQVLIDHKTGNSRGFGFVTFEDEAAIADLFGSSDGSAHHDILGKVVEVKKAEPKQSLESRR 318
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A7S1XHS3 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHS3_9RHOD) HSP 1 Score: 124 bits (311), Expect = 1.820e-25 Identity = 76/154 (49.35%), Postives = 96/154 (62.34%), Query Frame = 0
Query: 1150 HDLDGRQVEAKRAVPRSEGSS--------ASAAGHSASFAATPRGQRYNDGAAQ--GAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPG-KSNTDHEIMGKCVEVKRAEPKGAS 1292
H +DGR VEAKRA+PR++ S + A+ ++ +A PR +R + +A GAP+ K+FVGG+P+ YFS+FGEV AQVM+DH T SRGFGFVTFA A+V AVVG G KSN DHEIM K VEVK AEP+ S
Sbjct: 132 HFIDGRSVEAKRAMPRNDFGSMGVGSVVPSEASVPASVTSADPRERRLSASSAAIAGAPESDQANQHRKIFVGGIPTSLDDRGLHEYFSKFGEVAQAQVMLDHVTNKSRGFGFVTFADPASVTAVVGVGRKSNMDHEIMNKVVEVKIAEPRNRS 285
BLAST of Ggra6349.t1 vs. uniprot
Match: M2XIP2 (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIP2_GALSU) HSP 1 Score: 119 bits (299), Expect = 3.480e-25 Identity = 75/170 (44.12%), Postives = 95/170 (55.88%), Query Frame = 0
Query: 1127 ITYEKQDDNENFLRAATAAASRRHDLDGRQVEAKRAVPRSEGSSASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 1296
+T+EK++ +A AA++RH+LDGRQVEAK+AVP++E Y + P R K+FVGGLP C E+F YF R G VV+A +M DH TG SRGFGFVTF+SE V V + HEI GK VEVK+AEPK S+ RR
Sbjct: 96 VTFEKEE-------SADRAATKRHELDGRQVEAKKAVPKAE---------------------YITRSQVTKPTR-------KIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVF----EQSQHEIKGKIVEVKKAEPKHFSEGRR 226
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A5J4Z311 (Putative RNA-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z311_PORPP) HSP 1 Score: 122 bits (305), Expect = 1.810e-24 Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = 0
Query: 1146 ASRRHDLDGRQVEAKRAVPRSEGSSASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPK 1289
A+ +H+LDGR VEAKRAVPRS+ GA + KLFVGGLPS CG EFR YFSRFGE+++ VM DH TGNSRGFGFVT+ + V+ V+ +HEI+GK VE+K AEPK
Sbjct: 284 AAEQHELDGRAVEAKRAVPRSD--------------------------CSGAVKVPSSKGSRKLFVGGLPSACGDHEFRTYFSRFGEILELSVMFDHTTGNSRGFGFVTYYDDRAVDLVM-----QMEHEILGKRVEIKHAEPK 396
BLAST of Ggra6349.t1 vs. uniprot
Match: R7Q6L6 (HnRNP-like protein, RNA recognition motif (RRM)-containing protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6L6_CHOCR) HSP 1 Score: 116 bits (291), Expect = 4.860e-24 Identity = 75/155 (48.39%), Postives = 86/155 (55.48%), Query Frame = 0
Query: 1142 ATAAASRRHDLDGRQVEAKRAVPRSEGSSASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 1296
A A+ H+LDGRQVEAK AVPRSE A TK K+FVGGLP+ C E +F RFG+V + QVM DH TGNSRGFGFVTF SEATV+ VV + HEI+ K VEVKRAEPK A + RR
Sbjct: 45 AERVATEFHELDGRQVEAKIAVPRSE-------------------------CVPALRTNAWRATK-KVFVGGLPATCREAELLAHFKRFGDVAECQVMYDHQTGNSRGFGFVTFTSEATVDTVVDLDQ----HEILAKHVEVKRAEPKQALEARR 169
BLAST of Ggra6349.t1 vs. uniprot
Match: A0A2V3IP63 (RNA-binding protein Musashi-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP63_9FLOR) HSP 1 Score: 116 bits (290), Expect = 9.490e-24 Identity = 77/170 (45.29%), Postives = 91/170 (53.53%), Query Frame = 0
Query: 1127 ITYEKQDDNENFLRAATAAASRRHDLDGRQVEAKRAVPRSEGSSASAAGHSASFAATPRGQRYNDGAAQGAPQRAHHTTKCKLFVGGLPSGCGGEEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFASEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 1296
+TYE Q A A+ H+LDGRQVEAK AVPRSE + A TK K+F+GGLP+ C + +F RFG++ + QVM DH TGNSRGFGFVTF SE TV+ VV + DHEIM K VEVKRAEPK A RR
Sbjct: 65 VTYEDQ-------LVAERVAAEFHELDGRQVEAKIAVPRSE-------------------------CVPPSRSNAWRATK-KVFIGGLPATCREADLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVV-----DIDHEIMQKHVEVKRAEPKQALDARR 196 The following BLAST results are available for this feature:
BLAST of Ggra6349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6349.t1 ID=Ggra6349.t1|Name=Ggra6349.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1421bpback to top |