Ggra6304.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6304.t1
Unique NameGgra6304.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Homology
BLAST of Ggra6304.t1 vs. uniprot
Match: A0A2V3IJP3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP3_9FLOR)

HSP 1 Score: 279 bits (714), Expect = 1.750e-93
Identity = 141/188 (75.00%), Postives = 159/188 (84.57%), Query Frame = 0
Query:    5 AFTAPFTAARSPFLTTPVSTSRRTTNASVRLVPRAELRLQPGIPSGQDPQDNAPLRSYKPRPVETYEDRGFATVLPRNWAGEDSSIGAADIPPLTKESIEKSRQVEVTSESTSAFLEYSMMVKADREKALEEQKRRSSLGKTGRATCGEEEGKAFVSNYQTILVDGVKAVEYWGVPNGPVPRLFGGPG 192
            AFTAP T  RSPF+ TP++T R     S+R + RA+L L+PGIPSGQDPQ+NAP+R Y PRP E Y++RGFATVLPRNW GE SSIGAADI P+TKESIE+SR+V+VT  STSAFLEYS MVK DREKAL  QK RS + KTGRATCGEEEGKAFVSNYQT+LV+GVKAVEYWGVPNGPVPRLFGGPG
Sbjct:    5 AFTAPLTVLRSPFVATPLNTKRSPAQPSIRFITRADLNLKPGIPSGQDPQENAPIRYYVPRPKENYDNRGFATVLPRNWEGEVSSIGAADITPVTKESIEESRKVKVTPASTSAFLEYSQMVKEDREKALAIQKDRSEIEKTGRATCGEEEGKAFVSNYQTVLVEGVKAVEYWGVPNGPVPRLFGGPG 192          
BLAST of Ggra6304.t1 vs. uniprot
Match: A0A291FEB1 (LRC4 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB1_GRIPA)

HSP 1 Score: 216 bits (551), Expect = 1.050e-68
Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0
Query:   31 ASVRLVPRAELRLQP-GIPSGQDPQDNAPLRSYKPRPVETYEDRGFATVLPRNWAGEDSSIGAADIPPLTKESIEKSRQVEVTSESTSAFLEYSMMVKADREKALEEQKRRSSLGKTGRATCGEEEGKAFVSNYQTILVDGVKAVEYWGVPNGPVPRLFGGPG 192
            A + L PRA+  L P GIPSGQDP DNAPLR Y PRPVETYEDRGFAT+LPR W GE ++IGA DI P+TKE +E+SR+V V + ST AF+EY+ M+K +R +AL +Q RR+S   +GR TCGE EG  FVSN + ILVDGVK VEYWGVPNGPVPRLFGGPG
Sbjct:   29 APLTLTPRAQADLPPPGIPSGQDPLDNAPLRHYVPRPVETYEDRGFATILPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAPTSGRPTCGETEGTEFVSNARPILVDGVKVVEYWGVPNGPVPRLFGGPG 191          
BLAST of Ggra6304.t1 vs. uniprot
Match: A0A1X6NL72 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL72_PORUM)

HSP 1 Score: 167 bits (422), Expect = 3.300e-49
Identity = 85/154 (55.19%), Postives = 112/154 (72.73%), Query Frame = 0
Query:   41 LRLQPGIPSGQDPQDNAPLRSYKPRPVETYEDRGFATVLPRNWAGEDSSIGAADIPPLTKESIEKSRQVEVTSESTSAFLEYSMMVKADREKALEEQKRRSSLGKTGRATCGEEEGKAFVSNYQTILVDGVKAVEYWGVPN-GPVPRLFGGPGA 193
            ++ +PG+P G+D ++NAPLR Y P PVETYE R FATVLP+ W GE  +IGA D+P LT+ESI +S+ V +++ ST+AFLEY+ MVKA+R+ AL      S   +TGRATCG+ EG+ +VSN   +LV+GVK +EYWG  N   VPR FGGP A
Sbjct:   34 MQTRPGLPPGEDARENAPLRYYVPVPVETYEKRSFATVLPKTWEGEVVTIGAPDVPELTEESIAESKLVPLSASSTAAFLEYNAMVKAERKAALAAFAAGSETEQTGRATCGDSEGREYVSNANPLLVEGVKCIEYWGRTNPAAVPRAFGGPTA 187          
BLAST of Ggra6304.t1 vs. uniprot
Match: A0A7S0T6I9 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6I9_9RHOD)

HSP 1 Score: 115 bits (287), Expect = 2.080e-29
Identity = 64/136 (47.06%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   42 RLQPGIPSGQDPQDNAPLRSYKPRPVETYEDRGFATVLPRNWAGEDSSIGAADIPPLTKESIEKSRQVEVTSESTSAFLEYSMMVKADREKALEEQKRRSSLGKTGRATCGEEEGKAFVSNYQTILVDGVKAVEYW 177
            +L PG+PSGQD +DN PLRSY P PVETYE R FATVLP+ W GE  ++G AD P    E++E+   V  T+ESTSAF+EY+  +K +RE AL              A   E +G  + SN+  I  +GVK  E W
Sbjct:   23 KLVPGVPSGQDVRDNQPLRSYVPAPVETYEKRSFATVLPKTWEGEVPTVGVADAP----EAVEEDWLVPETAESTSAFVEYARKMKDEREAALA-------------AKLSEADGDLYPSNFAAIKYEGVKCFESW 141          
The following BLAST results are available for this feature:
BLAST of Ggra6304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJP31.750e-9375.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A291FEB11.050e-6866.87LRC4 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A1X6NL723.300e-4955.19Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0T6I92.080e-2947.06Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:502329..502910 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6304.t1Ggra6304.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 502329..502910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6304.t1 ID=Ggra6304.t1|Name=Ggra6304.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MAHPAFTAPFTAARSPFLTTPVSTSRRTTNASVRLVPRAELRLQPGIPSG
QDPQDNAPLRSYKPRPVETYEDRGFATVLPRNWAGEDSSIGAADIPPLTK
ESIEKSRQVEVTSESTSAFLEYSMMVKADREKALEEQKRRSSLGKTGRAT
CGEEEGKAFVSNYQTILVDGVKAVEYWGVPNGPVPRLFGGPGA*
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