Ggra6293.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6293.t1
Unique NameGgra6293.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A7S0G6S3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6S3_9RHOD)

HSP 1 Score: 305 bits (782), Expect = 6.070e-104
Identity = 142/185 (76.76%), Postives = 161/185 (87.03%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKE 185
            M+GIWA YNA L AKPLQTKT+TSFTGF+LGDLVAQAPD+++GK W+  RT K+ AFGL LHGPIGHYWY FLDRTVM AA TSA AVATKT IDQ+F+APIFT++FFG+MK MDGK DE+ GEV+EKLWPTMKVNWTVWP+AH+INFRFIPSSQRILYIN IQ+GYNAFLSTMQA     E K+
Sbjct:    1 MAGIWAAYNARLTAKPLQTKTLTSFTGFILGDLVAQAPDLAAGKPWDSWRTTKLAAFGLILHGPIGHYWYGFLDRTVMPAAATSAAAVATKTAIDQVFWAPIFTSVFFGSMKLMDGKADEIEGEVREKLWPTMKVNWTVWPIAHLINFRFIPSSQRILYINVIQVGYNAFLSTMQAKKGGEEQKK 185          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A7S1XB96 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XB96_9RHOD)

HSP 1 Score: 303 bits (775), Expect = 6.370e-103
Identity = 140/184 (76.09%), Postives = 160/184 (86.96%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAG---PKG 181
            M+GIWA+YN  L  KPL TKTMTSFTGF+LGDLVAQ+PD+  GKAW+  RTAK+  FGL LHGPIGHYWY FLDRTVMTAAPTSA AVA+KT IDQI +APIFT++FFG+MK +DGK DE+P E++EKLWPTMKVNWTVWP+AH+INFRFIPSSQRILYIN IQ+GYNAFLSTMQA+    PKG
Sbjct:    1 MAGIWAKYNQVLAEKPLMTKTMTSFTGFVLGDLVAQSPDLQKGKAWDSWRTAKLALFGLALHGPIGHYWYGFLDRTVMTAAPTSAAAVASKTAIDQILWAPIFTSIFFGSMKLLDGKQDEIPDEIREKLWPTMKVNWTVWPLAHVINFRFIPSSQRILYINVIQVGYNAFLSTMQASKKEEPKG 184          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A7S0ZE12 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE12_9RHOD)

HSP 1 Score: 299 bits (765), Expect = 2.530e-101
Identity = 137/185 (74.05%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKE 185
            MSG+WARYNA L  KPLQTKT+TS TGF+LGDLVAQAP I+SG  W+  RT+KM  FG+CLHGP+GH WY  LD+++MTAAPTSA AVATKT IDQ  FAPIFT++FFG+MKA+DGK DE+  E++ KLWPTMKVNWTVWP+AHIINFRFIPSSQRILYIN IQ+GYNAFLSTMQAAGP+  ++E
Sbjct:    1 MSGLWARYNANLAEKPLQTKTLTSLTGFVLGDLVAQAPTIASGGEWDSWRTSKMAIFGMCLHGPVGHLWYGMLDKSIMTAAPTSAAAVATKTIIDQTLFAPIFTSVFFGSMKALDGKADEIVPEIENKLWPTMKVNWTVWPIAHIINFRFIPSSQRILYINVIQVGYNAFLSTMQAAGPEKVSEE 185          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A2V3IJI0 (Mpv17-like protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJI0_9FLOR)

HSP 1 Score: 294 bits (753), Expect = 4.910e-100
Identity = 135/159 (84.91%), Postives = 149/159 (93.71%), Query Frame = 0
Query:   29 MLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKEAA 187
            MLGDLVAQAPDI+SGK W+ RRTAKMGAFGLC+HGP GHYWY+FLDRT+MTAAPTSA+AVATKT +DQIF APIFT++FFGAMKAMDGK DEV  EVKEKLWPTMKVNWTVWP+AH++NFRFIPSSQR+LYINT+QIGYNAFLSTMQAAG KGE KEAA
Sbjct:    1 MLGDLVAQAPDITSGKPWDARRTAKMGAFGLCIHGPFGHYWYTFLDRTIMTAAPTSARAVATKTAVDQIFLAPIFTSVFFGAMKAMDGKPDEVTSEVKEKLWPTMKVNWTVWPLAHLVNFRFIPSSQRVLYINTVQIGYNAFLSTMQAAGRKGEVKEAA 159          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A5J4Z819 (Protein SYM1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z819_PORPP)

HSP 1 Score: 282 bits (721), Expect = 1.460e-94
Identity = 130/185 (70.27%), Postives = 151/185 (81.62%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKE 185
            M+GI A YN AL + PL+TKT+TS TGF+LGDLVAQAPD+  GK W+  RT K+ AFG CLHGPIGHYWY FLDRT+MTAAPTSA AVATKT +DQI +APIFT++FFG+MK MDGK DE+  E++ KLWPTM VNW VWP+AH+INFRF+PSSQRILYIN IQ+GYNAFLSTM  A  K    E
Sbjct:    1 MAGIRAAYNRALASNPLRTKTLTSLTGFVLGDLVAQAPDMMDGKPWDAVRTGKLAAFGACLHGPIGHYWYGFLDRTIMTAAPTSAAAVATKTAVDQILWAPIFTSVFFGSMKLMDGKPDEIVPEIEAKLWPTMLVNWKVWPIAHVINFRFVPSSQRILYINFIQVGYNAFLSTMSNAPKKQAADE 185          
BLAST of Ggra6293.t1 vs. uniprot
Match: M2Y5Q9 (Peroxisomal membrane MPV17/PMP22-like protein isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5Q9_GALSU)

HSP 1 Score: 278 bits (710), Expect = 4.420e-93
Identity = 128/186 (68.82%), Postives = 150/186 (80.65%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKEA 186
            M+GIWARYNAAL A PL+ KT+TSF GF LGDL+AQ+PD+ SG  W+  RTA+  AFGLC+HGPIGHYWY FLDRTVMT AP S  AVATKT IDQ+ +APIFT++FF  MK ++G  D+V  EVK KLWPTMKVNW VWP+AH+INFRF+PSSQRILYIN++QIGYN FLSTM A+  K E   A
Sbjct:    1 MAGIWARYNAALTANPLKVKTLTSFFGFTLGDLIAQSPDMLSGNPWDYMRTARFSAFGLCIHGPIGHYWYQFLDRTVMTNAPKSGLAVATKTAIDQLLWAPIFTSIFFSFMKTVEGHPDQVTEEVKTKLWPTMKVNWGVWPLAHLINFRFVPSSQRILYINSVQIGYNTFLSTMAASKTKEEVSGA 186          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A1X6NU45 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU45_PORUM)

HSP 1 Score: 274 bits (701), Expect = 1.190e-91
Identity = 127/176 (72.16%), Postives = 144/176 (81.82%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQA 176
            MSGIWA+YN  L  KPLQTKT+TS TGF+LGDLVAQAP IS+G  W+  RTAKMG+FG+ LHGPIGHYWY FLDRT+MT APTSA AVA+KT IDQ+ +APIFT+ FF  MK  DGK  E+P E++ KLW TMKVNW  W  AHI+NF F+PSSQRILYINTIQIGYNAFLST QA
Sbjct:    1 MSGIWAKYNLRLAEKPLQTKTLTSLTGFLLGDLVAQAPSISAGGQWDAWRTAKMGSFGVLLHGPIGHYWYGFLDRTIMTKAPTSALAVASKTAIDQVLWAPIFTSGFFAYMKTADGKTSEIPAEIQGKLWDTMKVNWMTWIPAHIVNFAFVPSSQRILYINTIQIGYNAFLSTQQA 176          
BLAST of Ggra6293.t1 vs. uniprot
Match: M1UWN4 (Similar to peroxisomal membrane protein PMP22 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1UWN4_CYAM1)

HSP 1 Score: 255 bits (651), Expect = 4.390e-84
Identity = 114/177 (64.41%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAA 177
            M+  W++Y   L  KPLQ KTMTSF GF +GDLVAQ P +  GK W+  RTA+M +FGL LHGPIGHYWY FLDRT+M  A  S  AV +K  IDQ+ +AP+FT++FF  M+A +GK +  P  V+EKLWPT+KVNWTVWP+AH+INFRFIPSSQRILYINT+Q+GYNAFLSTM AA
Sbjct:    1 MATFWSKYTQLLAEKPLQVKTMTSFIGFTIGDLVAQIPALMDGKPWDAARTARMASFGLVLHGPIGHYWYEFLDRTIMPQASKSTAAVVSKMAIDQLLWAPVFTSLFFSYMQAAEGKPERAPEVVREKLWPTLKVNWTVWPLAHLINFRFIPSSQRILYINTVQVGYNAFLSTMAAA 177          
BLAST of Ggra6293.t1 vs. uniprot
Match: M2WRS1 (Peroxisomal membrane MPV17/PMP22-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRS1_GALSU)

HSP 1 Score: 212 bits (540), Expect = 5.430e-67
Identity = 90/173 (52.02%), Postives = 123/173 (71.10%), Query Frame = 0
Query:    4 IWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQA 176
            +W RYN AL  +PL  K +TS  G  LGD++AQ P +  G+ W+V RT +  +FGL +HGP+ H WY FLD+ ++  AP S +AV  KT +DQ+ +AP+FT++FF  +KA  G   ++  E++ KLWPT+KVNW VWP AHI NFRF+P SQR+LY+N I +GYNAFLS+M A
Sbjct:   12 LWYRYNRALATRPLPVKVVTSTVGLALGDVIAQLPLMYEGERWDVLRTLRFSSFGLVVHGPLSHVWYQFLDKHILATAPKSFRAVVAKTMMDQLLWAPVFTSVFFAYLKAAQGNWGDIIPEIRHKLWPTLKVNWLVWPAAHIFNFRFVPDSQRVLYVNIIALGYNAFLSSMAA 184          
BLAST of Ggra6293.t1 vs. uniprot
Match: A0A6S9LPN5 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LPN5_HETAK)

HSP 1 Score: 179 bits (454), Expect = 3.220e-54
Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    1 MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRRTAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFAPIFTTMFFGAMKAMDGKVD-EVPGEVKEKLWPTMKVNWTVWPVAHIINFRFIPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKE 185
            MSG+WA+YNA L A+PL  K +TS TGF +GD++AQ   I+    ++V RT +MGAFG+  HGP GHY+Y FLD  +   A T+   VATK  IDQ+ + PIF   FF  + A +GK   E+  ++K  L   +  +WTVW  AHIINFRFIPSSQR+LYIN+IQIGYN FLS +      GE ++
Sbjct:    1 MSGLWAKYNAFLEAQPLACKALTSLTGFTIGDILAQK-FINPEDDYDVARTVRMGAFGMLFHGPTGHYFYGFLDGKLPGTATTT---VATKVAIDQLIWNPIFGVCFFSFLGAAEGKSGGEIVDKIKNDLMTAVTGSWTVWVPAHIINFRFIPSSQRLLYINSIQIGYNMFLSFLGNKKVDGEEEK 182          
The following BLAST results are available for this feature:
BLAST of Ggra6293.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0G6S36.070e-10476.76Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XB966.370e-10376.09Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZE122.530e-10174.05Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2V3IJI04.910e-10084.91Mpv17-like protein 2 n=1 Tax=Gracilariopsis chorda... [more]
A0A5J4Z8191.460e-9470.27Protein SYM1 n=1 Tax=Porphyridium purpureum TaxID=... [more]
M2Y5Q94.420e-9368.82Peroxisomal membrane MPV17/PMP22-like protein isof... [more]
A0A1X6NU451.190e-9172.16Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1UWN44.390e-8464.41Similar to peroxisomal membrane protein PMP22 n=2 ... [more]
M2WRS15.430e-6752.02Peroxisomal membrane MPV17/PMP22-like protein n=1 ... [more]
A0A6S9LPN53.220e-5450.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 116..172
e-value: 2.4E-21
score: 75.7
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 3..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:437573..438322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6293.t1Ggra6293.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 437573..438322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6293.t1 ID=Ggra6293.t1|Name=Ggra6293.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MSGIWARYNAALVAKPLQTKTMTSFTGFMLGDLVAQAPDISSGKAWNVRR
TAKMGAFGLCLHGPIGHYWYSFLDRTVMTAAPTSAKAVATKTGIDQIFFA
PIFTTMFFGAMKAMDGKVDEVPGEVKEKLWPTMKVNWTVWPVAHIINFRF
IPSSQRILYINTIQIGYNAFLSTMQAAGPKGETKEAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22