Ggra6262.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6262.t1
Unique NameGgra6262.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length144
Homology
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A2V3IMA4 (Profilin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMA4_9FLOR)

HSP 1 Score: 238 bits (607), Expect = 9.060e-79
Identity = 108/142 (76.06%), Postives = 127/142 (89.44%), Query Frame = 0
Query:    2 SWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALNQSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            SWQ+Y+DDQL+AAG MYAAI  HDG+ WASSPGF +S EEC+VL +AL  S+LGKISGSGFTIATQKYTFTRGEVDD+EG PSY QGRCKE+GK++QGVI+Y+T  AF++GVHDP Y+DGASFG VNTDAGR+ADY+MELGF
Sbjct:    3 SWQTYVDDQLMAAGCMYAAIYGHDGSKWASSPGFDISNEECEVLVEALVNSNLGKISGSGFTIATQKYTFTRGEVDDEEGNPSYAQGRCKEEGKSAQGVIIYATTQAFVIGVHDPQYADGASFGSVNTDAGRVADYLMELGF 144          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A1X6NT81 (Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT81_PORUM)

HSP 1 Score: 204 bits (519), Expect = 2.250e-65
Identity = 97/143 (67.83%), Postives = 115/143 (80.42%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALNQSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQSYIDDQLLAAGF YA+IV HDGT+WA SPG++V  EE K L   L+ + L  I+G GF++A Q+Y FTRGEVDDDEGG  + QGRCKE+GK+SQGVIV  T SA +VGVHDP Y++GASFGKVNTD GR+ADY +E GF
Sbjct:    1 MSWQSYIDDQLLAAGFSYASIVGHDGTTWACSPGYSVLPEEAKSLATLLSSTSLESIAGPGFSVAGQRYAFTRGEVDDDEGGVPFIQGRCKEEGKSSQGVIVMRTTSALLVGVHDPAYANGASFGKVNTDIGRLADYFVESGF 143          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A7S1TMC4 (Profilin n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMC4_9RHOD)

HSP 1 Score: 187 bits (476), Expect = 8.450e-59
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALN--QSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQ+YID  LL AGF YA+I  HDG++WA SPG+TV   E   L+  L+    DL  I+  GF +A QKY FTRGEVDD++GG  Y QGRCKE+GK++QG+I+Y TA A IVGVHDP YS+GASFGKVNT+ G++ADY+ E GF
Sbjct:    1 MSWQTYIDSNLLGAGFCYASICGHDGSTWACSPGYTVLPAEASKLNSLLSGTMDDLNSIASGGFYVAGQKYAFTRGEVDDEDGGVPYLQGRCKEEGKSAQGIIIYRTAKALIVGVHDPAYSNGASFGKVNTEIGKVADYMFENGF 145          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A7S0ZK44 (Profilin n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK44_9RHOD)

HSP 1 Score: 181 bits (460), Expect = 2.300e-56
Identity = 85/145 (58.62%), Postives = 107/145 (73.79%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALN--QSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQ+Y+D  LL AGF YAAI  HDG  WA+SPG+TV   E   LD  L+    +L  I+  GF +A QKY FTRGEVDD++GG  + QGRCKE+GK++QG+IVY T  A I+GVHDP YS+GASFGKVNT+ G++ADY+ E G+
Sbjct:    1 MSWQTYVDANLLGAGFCYAAICGHDGAMWANSPGYTVLPAEAVKLDGLLSGTMENLSSIANGGFYVAGQKYAFTRGEVDDEDGGVPFLQGRCKEEGKSAQGIIVYRTGKALIIGVHDPAYSNGASFGKVNTEIGKVADYMFENGY 145          
BLAST of Ggra6262.t1 vs. uniprot
Match: R7QK25 (Profilin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK25_CHOCR)

HSP 1 Score: 180 bits (457), Expect = 6.380e-56
Identity = 85/143 (59.44%), Postives = 109/143 (76.22%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALN-QSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELG 142
            M+WQ+YIDD L+ AGFMYAAIV HD ++WA++  F V + E K+L   L  +    +IS +GF +A QKYT TR E+DDD+GG ++ QGRCKE+GK++QGVI+  TA + IVGVHDP YS+GASFGK NTD GR+ADYIME G
Sbjct:    1 MTWQTYIDDHLVPAGFMYAAIVGHDASTWANTKDFQVLDAETKILVSLLTGEKSFDEISTTGFHVAGQKYTMTRYEIDDDDGGAAFLQGRCKEEGKSAQGVIIMCTAQSLIVGVHDPKYSNGASFGKANTDIGRVADYIMEAG 143          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A1X6P840 (Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P840_PORUM)

HSP 1 Score: 179 bits (453), Expect = 2.510e-55
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALNQSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQSYIDDQLLAAGF YA+I  HDG+ WA S G+TV  EE   L + L  + L  I+ +GF +A QKY +TRGEVDDDEGG  + QGRCKE+GK++QG I+  T+ A I+ VHDP YS GA+FGKVN +  RIADY +E GF
Sbjct:    1 MSWQSYIDDQLLAAGFCYASINGHDGSLWACSKGYTVLPEEAIKLAELLGGTSLDSIASTGFLLAGQKYAYTRGEVDDDEGGVPFLQGRCKEEGKSAQGCIIMRTSQAVIIAVHDPAYSGGATFGKVNIEIARIADYFVESGF 143          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A7S1TDT3 (Profilin n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT3_9RHOD)

HSP 1 Score: 173 bits (438), Expect = 4.810e-53
Identity = 84/143 (58.74%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALNQSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQ YID QLL AGF YA+IV  DG+ WASS G+ +  +E K     L  + L  +S +GFT A QKY FTRGEV+D  G   + QGRCKEDGK+SQG+I+  T  A IVGVHDP YS+GASFG  NT  GRIADY +E GF
Sbjct:    1 MSWQDYIDGQLLRAGFCYASIVGFDGSCWASSQGYVILPDEAKRFASLLAGTSLDSLSAAGFTAAGQKYAFTRGEVNDPNGSVPFIQGRCKEDGKSSQGIIIMKTTQALIVGVHDPAYSNGASFGSANTAIGRIADYFVESGF 143          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A5J4YIH8 (Profilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIH8_PORPP)

HSP 1 Score: 169 bits (429), Expect = 1.240e-51
Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALN-QSDL--GKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQ+Y+D  LL AGF YAAIV HDG++WA+SPG+TV  +E   L Q L   +D    ++S  GF +A Q+Y FTR EVDDD+GG    QGRCKE+GK++QG+I+Y TA A I+G HDP YS+GASF K N + G++ADY+ E  F
Sbjct:    1 MSWQTYVDQNLLGAGFCYAAIVGHDGSTWAASPGYTVLPDEAARLAQLLGGDADTINTQLSSGGFKVAGQQYAFTRAEVDDDDGGVPTLQGRCKEEGKSAQGIIIYRTAQALIIGCHDPAYSNGASFNKANMEMGKVADYMFENSF 146          
BLAST of Ggra6262.t1 vs. uniprot
Match: M2XQ49 (Profilin n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQ49_GALSU)

HSP 1 Score: 156 bits (394), Expect = 2.210e-46
Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALNQSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSWQSYIDD LLA+GF YAAI   DG+ WA+SPGF +  EE  +L + L++ ++  I+ +GFT+A QKY FTR ++DD+E  PS  QGRCKE+G + +G+IV  +  A IVGVHDP Y+  A+F +VN D   +A+Y+ME GF
Sbjct:    1 MSWQSYIDDNLLASGFCYAAICGFDGSPWANSPGFQLLPEEATLLSKVLSEGNIDTIASNGFTVAGQKYAFTRADLDDEEAAPSI-QGRCKEEGLSGRGLIVMKSNQALIVGVHDPEYTS-ATFRQVNLDMTNLANYLMENGF 141          
BLAST of Ggra6262.t1 vs. uniprot
Match: A0A2V3IVN0 (Profilin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN0_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 1.710e-23
Identity = 54/145 (37.24%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    1 MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEEC-KVLDQALNQSDLGKIS-GSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGVIVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF 143
            MSW  Y+D  L+ AGF +A I  HDG  W S+P F V   E  +++   L+  +  + +  SGFT+    Y   R  +D+ E       GRCK+ GK ++G IV  TA + I+G+HDP YSDG SFG+      ++A+ ++ + F
Sbjct:    1 MSWDPYVDT-LVEAGFHHACIAGHDGHVWGSTPDFKVQNAEIIRLVSVLLDDPEAIRAAYKSGFTLCVMPYALNR--LDEAEDDLRMLVGRCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGKSFGRAKVAVFQLAETLIAMNF 142          
The following BLAST results are available for this feature:
BLAST of Ggra6262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMA49.060e-7976.06Profilin n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
A0A1X6NT812.250e-6567.83Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 R... [more]
A0A7S1TMC48.450e-5960.69Profilin n=1 Tax=Erythrolobus australicus TaxID=10... [more]
A0A7S0ZK442.300e-5658.62Profilin n=1 Tax=Timspurckia oligopyrenoides TaxID... [more]
R7QK256.380e-5659.44Profilin n=1 Tax=Chondrus crispus TaxID=2769 RepID... [more]
A0A1X6P8402.510e-5560.14Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 R... [more]
A0A7S1TDT34.810e-5358.74Profilin n=1 Tax=Compsopogon caeruleus TaxID=31354... [more]
A0A5J4YIH81.240e-5155.48Profilin n=1 Tax=Porphyridium purpureum TaxID=3568... [more]
M2XQ492.210e-4653.15Profilin n=1 Tax=Galdieria sulphuraria TaxID=13008... [more]
A0A2V3IVN01.710e-2337.24Profilin n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005455ProfilinPRINTSPR01640PROFILINPLNTcoord: 23..36
score: 48.7
coord: 1..11
score: 54.42
coord: 68..77
score: 40.0
IPR005455ProfilinSMARTSM00392prof_2coord: 1..143
e-value: 5.0E-19
score: 79.2
IPR005455ProfilinPFAMPF00235Profilincoord: 1..142
e-value: 5.3E-27
score: 94.5
IPR005455ProfilinPANTHERPTHR11604PROFILINcoord: 1..142
IPR005455ProfilinCDDcd00148PROFcoord: 2..143
e-value: 3.93816E-24
score: 88.5364
NoneNo IPR availableGENE3D3.30.450.30Dynein light chain 2a, cytoplasmiccoord: 1..142
e-value: 8.2E-28
score: 99.0
NoneNo IPR availablePANTHERPTHR11604:SF0PROFILINcoord: 1..142
IPR027310Profilin conserved sitePROSITEPS00414PROFILINcoord: 1..8
IPR036140Profilin superfamilySUPERFAMILY55770Profilin (actin-binding protein)coord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:359212..359843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6262.t1Ggra6262.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 359212..359843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6262.t1 ID=Ggra6262.t1|Name=Ggra6262.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=144bp
MSWQSYIDDQLLAAGFMYAAIVSHDGTSWASSPGFTVSEEECKVLDQALN
QSDLGKISGSGFTIATQKYTFTRGEVDDDEGGPSYCQGRCKEDGKTSQGV
IVYSTASAFIVGVHDPNYSDGASFGKVNTDAGRIADYIMELGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005455PFN
IPR027310Profilin_CS
IPR036140PFN_sf