Ggra6249.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6249.t1
Unique NameGgra6249.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length509
Homology
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BLAST of Ggra6249.t1 vs. uniprot
Match: A0A2V3II28 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II28_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 3.030e-50
Identity = 149/488 (30.53%), Postives = 239/488 (48.98%), Query Frame = 0 
Query:    1 MIEIPFGPGVAAAFLFLIFELVVFPVLIYTTSAVASILIYCHAKKGNEVRIETLKFPYWNGDLLHRQWSHVLLLMLRAALIAIPVYLETGLEARRS--LVSSTIRHAFTVAPTENWVLYERNLNVSIGELIQQGRMVYDRCTRIDAEGWRIAPHANVSFL-ENGRQRVECIPNTEKKVFRPVRNKDSMRNYSKHENDVSVKLSWVEGPVEAFPN-----DSFSRDDRTKSQRYNNYTGMQYMVTNIELNDESDLECFPSSSLQVPTIPTTFEFT--SHLRDTPSFLCQKVTGTIIEYF---FGVSEIRALNITSEER-------TDMLTNRTGSLTVTMRYIETLQFEKDMMIDAAQVANYSPGADDWRVYGSGCDSCTNGSGAAEALHTRMNNLLYTRADNVT-LEVSSSQFDVTVISNKLLIIGVVEVGAVLLCG-----ACMYVWLHCYDVQMPNTLNGLSELWAVSSDGAEYMGTRKRRRVVLR 462
            M+ +PF  GV +A LFL FE++VFP+L Y+TS +AS+ +Y +A+KGN+V I+ +KFP W+  L   Q SH  LL +R  LIAIPVYLET LE+R    +VS T+ HAF   PT++W  Y+      I  L + G   +  CT +D +GW  A  AN +++ E+   ++ C+ NTE+ ++     + +++    +   + + +SW EG V  FP      D F R+       +  +         + LND +    FP       T+ T F  +   H        CQK     + ++     + ++   N++ E R       +  L +R  +  + + Y  + QF+  +++ A  +ANY P   D+       DS    S  A+ +       LY++A NVT L +S      T I  + +II + E+  VLL       A +  W H   +Q PNT++GLS  WA S     +  T++ + + LR
Sbjct:    1 MVVVPFSSGVVSALLFLAFEIIVFPLLFYSTSILASLFLYRNARKGNDVVIDKMKFPLWSEGLSRHQTSHYSLLAIRIVLIAIPVYLETTLESREEPEMVSRTVTHAFVPQPTDDWYTYQIRSGEHIDSLRRTGLNTFLACTSVDEKGWVWAKVANFTYIQEHDAHQIRCVSNTEQPIYSLT--EATVKYGPGNVQLLKMSVSWTEGRVADFPQALVLKDRFGREAPPGETAFRVHNA-------VALNDTAVKCYFPQ------TVRTRFSKSRNGHPHTAWRGWCQKEEPIGVAFYSLLVNMDQLPMHNLSYETRERGRCGSSCKLRSRNATTVLEIVYRGSFQFKDKVLLGAKHLANYIP---DY-------DSSLRASDIAQCI-------LYSKASNVTVLTLSGRTLPRTEIEGRAIIIAISEIVVVLLFALMLSCARLSKWGH---IQQPNTVSGLSNCWAESQKALSHQRTKEGKWIKLR 453
The following BLAST results are available for this feature:
BLAST of Ggra6249.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II283.030e-5030.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..508
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..423
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 424..508
NoneNo IPR availableTMHMMTMhelixcoord: 68..87
NoneNo IPR availableTMHMMTMhelixcoord: 401..423
NoneNo IPR availableTMHMMTMhelixcoord: 10..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:240081..241607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6249.t1Ggra6249.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 240081..241607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6249.t1 ID=Ggra6249.t1|Name=Ggra6249.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=509bp
MIEIPFGPGVAAAFLFLIFELVVFPVLIYTTSAVASILIYCHAKKGNEVR
IETLKFPYWNGDLLHRQWSHVLLLMLRAALIAIPVYLETGLEARRSLVSS
TIRHAFTVAPTENWVLYERNLNVSIGELIQQGRMVYDRCTRIDAEGWRIA
PHANVSFLENGRQRVECIPNTEKKVFRPVRNKDSMRNYSKHENDVSVKLS
WVEGPVEAFPNDSFSRDDRTKSQRYNNYTGMQYMVTNIELNDESDLECFP
SSSLQVPTIPTTFEFTSHLRDTPSFLCQKVTGTIIEYFFGVSEIRALNIT
SEERTDMLTNRTGSLTVTMRYIETLQFEKDMMIDAAQVANYSPGADDWRV
YGSGCDSCTNGSGAAEALHTRMNNLLYTRADNVTLEVSSSQFDVTVISNK
LLIIGVVEVGAVLLCGACMYVWLHCYDVQMPNTLNGLSELWAVSSDGAEY
MGTRKRRRVVLRRTKRVDSEPHKILEPSVIVPADEEEQDIQVQNCEQETR
DERLDTKA*
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