Ggra6214.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6214.t1
Unique NameGgra6214.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length406
Homology
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IQ74 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ74_9FLOR)

HSP 1 Score: 204 bits (520), Expect = 6.710e-55
Identity = 104/203 (51.23%), Postives = 145/203 (71.43%), Query Frame = 0
Query:   97 KESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNYT 299
            K++H ELSRRMLM+HAGFD   DL   N++AFEAILD+C GLPLA GIAG +VL  +  K + ERQ+AWS F++D+L +  D+Y+V    YG LPKIV+ SL+VLEK     ++ E+FRAL V++K+Q+V   ML +LW +E   +AE+VV+   +VS+ Q R +G ++ +QLHD+VLDIA R A ER +    F++LV +YT
Sbjct:  321 KDTHGELSRRMLMKHAGFDAEYDLSKENKKAFEAILDICDGLPLACGIAGSAVLNISRSKSQEERQDAWSKFHQDILSHTRDMYDVTMEGYGNLPKIVDASLEVLEKSSSKGRYCERFRALCVLQKQQKVSTRMLHKLWDMENLADAERVVDRFKEVSIAQKRDDGGLVYIQLHDIVLDIATRMAEERGQRHKMFRDLVYSYT 523          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IBV0 (Vegetative incompatibility protein HET-E-1 n=6 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBV0_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 4.730e-52
Identity = 101/203 (49.75%), Postives = 142/203 (69.95%), Query Frame = 0
Query:   97 KESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNYT 299
            K++H ELSRRMLM+HAG+D   DL   N+ AFEAILDMC GLPLA GIAG SV   +  K   ++Q+AWS F++ +L +R D+Y+V    YG LPKIV+ SL+VLE+ +   ++ E+FRAL V++K+++V   MLQ+LW  E   +AE+VV+   +VS+ Q R +G ++ +QLHD+VLDIA R A  R E    F++LV +YT
Sbjct:  321 KDTHGELSRRMLMKHAGYDAECDLSEENKNAFEAILDMCDGLPLAHGIAGSSVWNISRTKSAEQKQDAWSKFHQGILSHRNDMYDVTMEGYGKLPKIVDASLEVLERCNSRGRYCERFRALCVLQKQEKVSTRMLQKLWDTENLADAERVVDRFKEVSIAQKREDGGLVYIQLHDIVLDIATRMAEGRSERHKIFRDLVYSYT 523          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3ICP6 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP6_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 9.190e-44
Identity = 97/201 (48.26%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   98 ESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            E+   L+RRMLM HAGF+G  +L   N+ A  AILDMCQGLPLA GIAG SV +    KR  + Q+AWSDF+ DLL  R +L          LP IV+ SL+VLEK      + + F+AL V++K+Q VP+ MLQ+LW L + DEA++VV+    VS+VQ   +G+   +QLHDL+LDIA  +A E+ E + +F+ LV NY
Sbjct:  325 EARSVLARRMLMTHAGFEGGTELGEKNEAAVGAILDMCQGLPLALGIAGASVRSILGTKRADQGQDAWSDFHEDLLSKRKNLLNTSHEK-NKLPNIVDISLEVLEKSSDGRSYQQLFKALCVIQKQQTVPIRMLQKLWDLNQIDEAKEVVQKFCTVSIVQKCTDGST-CIQLHDLILDIAVDRASEQFETQKYFRTLVCNY 523          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IH58 (NB-ARC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH58_9FLOR)

HSP 1 Score: 152 bits (383), Expect = 2.190e-36
Identity = 86/203 (42.36%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   97 KESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVK-FDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            + +H +++  ML+ HAGF    +L   N++AF+ ILD+C+GLPLA GIAG +V    Y +RE  +Q+AW D+ R+L+    ++    A  YG +  +V++SL VL+      K F+E FR   VV K+Q+V   +LQRLW L +  EA +V E   +V +VQ+    N   +QLHDLVLDIA R A +R E   +F  LVDNY
Sbjct:  354 RATHGQITEHMLLTHAGFGTDTELCSENRKAFDGILDICKGLPLAIGIAGATV-KKYYDRRERNKQDAWVDYCRNLISKEENIIGESADRYGKVRLMVDSSLDVLKTSSGFTKSFEEMFRGFCVVRKQQKVSGQVLQRLWNLGELREAREVAERFDEVCLVQMTGSWNKFYVQLHDLVLDIAMRNASDRYEVTQWFGTLVDNY 555          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IH62 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH62_9FLOR)

HSP 1 Score: 142 bits (359), Expect = 3.000e-33
Identity = 79/203 (38.92%), Postives = 123/203 (60.59%), Query Frame = 0
Query:   97 KESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVK-FDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            + +H  ++  ML+ HA F    +L   N++AF+ IL +C+GLPLA G+AG +V +  + +RE  +++AW D+YR L+    ++    A  YG    IV++SL+VL       K FD  FR   ++ K+Q+V   +LQ+LW L +  EA +V E   +VS+VQ+    N   +QLHDLVL+IA RKA +R E + +F  L++NY
Sbjct:  337 RATHGGIAELMLLTHARFGSDTELSLENKQAFDGILGICKGLPLAIGVAGATV-SKYHDRREMNKEDAWLDYYRTLISKEENIIGESADRYGEFRLIVDSSLEVLNTNTGFEKTFDAMFRGFCILRKQQKVSGQVLQKLWSLGELREARQVAEAFDEVSLVQMTGSRNYFCVQLHDLVLNIAMRKASDRYEVKWWFGTLIENY 538          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IKW8 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKW8_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 1.450e-28
Identity = 80/212 (37.74%), Postives = 123/212 (58.02%), Query Frame = 0
Query:   90 VDHATMVKESHCE-LSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVK-FDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQI-RREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            VD   + KE   E L++RMLM HA      DL   N+EA + IL++CQGLPLA GIAG +V   +Y   +   Q+AWS++Y DL      +       YG L +IV+ SL+VL+ E    K F++ F+   V++++Q V  SMLQ+LW ++    A ++ E+   VS++++ R++ N   +Q+HDLVL+IA   A    +   + K L+ NY
Sbjct:  320 VDKNVLFKEREDEELAQRMLMNHASIGNYTDLNSSNREAVKGILEICQGLPLALGIAGATV--RSYCGSDMNDQDAWSNYYHDLKSKAKSIASGSTKLYGPLRRIVDRSLEVLDLESRFEKTFEDMFQGFCVLQRQQSVRGSMLQKLWNVDDLGGAVEIAELFESVSLIRMMRKKENEFSIQVHDLVLEIANEMASGSRKTE-WLKTLLKNY 528          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IKX0 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKX0_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 3.550e-19
Identity = 73/214 (34.11%), Postives = 111/214 (51.87%), Query Frame = 0
Query:   88 ADVDHATMVKESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGA-LPKIVETSLQVLEKEDPDVK-FDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIR-REGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            AD D        H EL++RMLM+HAG +   DL   N++A + IL+ C+GLPL  GIAG ++    Y     + Q+  S +Y DL     ++   +A  Y   L  IV+ SL+VL+ E    K F E F+   V++K Q V   +LQ LW L+       +  +    S++++R   G+   +Q+HDL+LDIA+  A        +FK L+  Y
Sbjct:  329 ADTDVHFRPLHVHGELAQRMLMKHAGIESYVDLRSANRKAVKGILERCKGLPLTLGIAGAAMWR--YFDSGVDYQDVLSKYYDDLKSKEENIVAGRAELYDPPLRLIVDKSLKVLDTESRFEKSFKEMFQGFCVLQKHQSVSGHVLQGLWNLDDLGSTRMIAALFERESLIKMRLMGGDEFSVQVHDLILDIAKEMASGGRMTE-WFKALLKRY 539          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3IE05 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE05_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 6.160e-19
Identity = 64/202 (31.68%), Postives = 103/202 (50.99%), Query Frame = 0
Query:   97 KESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPDVKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNY 298
            KE++ +++RRMLM HA FD  + L   N+EA   IL +C GLP+A G+ G +V     ++R  +  + W+  Y  L   +  + +  A  Y +            +  +P V                         LWGL   ++ + +VE L +VS+V+   +G ++LLQLHD++LDIA RKA E+ E + F+K L++NY
Sbjct:  328 KETYSQMARRMLMTHAEFDCKETLNERNEEAVRGILRICDGLPVAIGVVGETVRKEN-RRRLDDNADIWNVVYDRLRFRKESISDGFAEAYAS------------DGSNPYV-----------------------ANLWGLPDLEKTKDIVEELDEVSLVRKLFDGQLVLLQLHDVILDIAIRKASEQYEVKRFWKVLIENY 493          
BLAST of Ggra6214.t1 vs. uniprot
Match: A0A2V3ICZ7 (Apoptotic protease-activating factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ7_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 5.450e-12
Identity = 57/217 (26.27%), Postives = 105/217 (48.39%), Query Frame = 0
Query:   96 VKESHCELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVLTNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQVLEKEDPD-------VKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEMLFDVSVVQIR----REGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNYTGI 301
            +++S    S+ +L+ +A     D     N ++FE +L++C GLP A  +AG         K   +  + +      +    T++ E +   Y AL  ++  ++Q  E+           + F+E  ++LSV++K+Q  P SMLQRLW ++     + +VE+L DV +V+      + G V+ +++HDL  D    KA ++     F   L+D Y  +
Sbjct:  415 LRKSCSSTSKAILLDNARMKAGDFRVARNTKSFELLLEVCDGLPAALAVAG-----QLMGKYGCQFPDPFGRVLSRMESKPTEVREYRPPGYKALSDLLNAAVQFCERHHGQEWQRRTGMSFEEIVQSLSVLQKQQFAPTSMLQRLWRVDNETSCQDLVEVLKDVGLVKQETRPDKNGTVVGIRIHDLFHDHFSSKANKKNS--NFHARLLDGYISV 624          
The following BLAST results are available for this feature:
BLAST of Ggra6214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IQ746.710e-5551.23Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3IBV04.730e-5249.75Vegetative incompatibility protein HET-E-1 n=6 Tax... [more]
A0A2V3ICP69.190e-4448.26Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3IH582.190e-3642.36NB-ARC domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3IH623.000e-3338.92Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3IKW81.450e-2837.74Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3IKX03.550e-1934.11Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3IE056.160e-1931.68Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
A0A2V3ICZ75.450e-1226.27Apoptotic protease-activating factor 1 n=1 Tax=Gra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 194..281
e-value: 5.6E-11
score: 44.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:99403..104851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6214.t1Ggra6214.t1Gracilaria gracilis GNS1m malemRNAtig00000167_pilon 99403..104851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6214.t1 ID=Ggra6214.t1|Name=Ggra6214.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=406bp
MQSIVTFSELLSVVERLEITVNKFFQRRDIAHENVQTLRRLERKYNDAIN
LCRELEAVSDTDQLTDVTLKHYHATFEDNCETLHKLHADVDHATMVKESH
CELSRRMLMRHAGFDGADDLEGGNQEAFEAILDMCQGLPLAFGIAGGSVL
TNTYKKREGERQNAWSDFYRDLLDNRTDLYEVKASPYGALPKIVETSLQV
LEKEDPDVKFDEKFRALSVVEKKQEVPLSMLQRLWGLEKRDEAEKVVEML
FDVSVVQIRREGNVILLQLHDLVLDIARRKAGEREEARGFFKNLVDNYTG
ISISSILLQLSGEEEHWRPALFLFFQNNCKPTAKEAAKVVTQIEMIPIIL
SDTAQSGRVDPSRYCDELQSQGRRDQMLEQIGRDRSDSLNEFFPFLKIKR
KRRGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf