Ggra6213.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6213.t1
Unique NameGgra6213.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length917
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..898
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..916
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..54
NoneNo IPR availableTMHMMTMhelixcoord: 103..120
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 72..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:94773..97523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6213.t1Ggra6213.t1Gracilaria gracilis GNS1m malemRNAtig00000167_pilon 94773..97523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6213.t1 ID=Ggra6213.t1|Name=Ggra6213.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=917bp
MATNPSTDILSTASKEAICNLVDNDCPINSSEQRLFIILAYIAVFVPWGF
LGLFDMITERWQSIAVLRFQARAQLYFSFPTIGYIIFYIVIQKQGNDYKE
MCAAIVVFCLSTFHFYRTYWGLYQLRHVHAWVKLSLKYLHEQNYELRHIE
QFQSKLRRSRLTIILQRVRDKYNRFRKLREEDRMLHNLAAGMYINSSVID
NEFFDTDIPFLLNWEKLFDELRWPKTFKELIKSPALAMGHLKHMFSRRKT
REETWILPKYFSESCIRCMVPFLAQFGIEWLKHSHAIRKVLNKKEQVNGV
LTSNFLEHAHMLTSSTAWSGILMHREGSRFWEKKWMETQLLPFRKQTNGL
GECDSYMRFESKIRRLIDGLHPVFFELHPSYLSVIESISAFDLENFVMFL
HSGPLEAEPSRRSGIVQNAEESIELPLSTKSEVPANTTTHERLAFEKLGY
NSAHPNDQLYKWSEKRVSEFTSHLENLFSIGHEYIELNELGYGDYLELFS
LYKNRRHLLRYPRKPKCSFSRWYWDLWKLPSSSPPTMGDNALLPPAFVRP
AFQKSEKHPICIRYIGFIMERVRICLAEWTDNDENYKSIDSSEIWNRVLP
GETVSFLGSREFPKLCESDSGSPKDFFIRLSRGEGEDKEFRWSVEEQIIW
ECQKYLLDSICGKEGSVGPGNVQLMLLCMLAFPVLSVRTVHSDDGSRDIF
VKPVAPGNSLVVSIKFEWYHSYICRMMIIPEEEVKFNGACLFDRLSEPNW
RKRIWRTKSTSEVQSRMTEVMFQWPKWIHAFEACMKTLFCAYEEEELEPY
SGKSSGEKSHSDKSSSKKLDLECSCKYQICHKARRDYVDKNNYCWAWDDW
KPQQAFKVFPILFGNDDEETTRNGSDVNTLHTASSVHDDGVSDGTSEGPV
TLNLGWSEQTDSDEIV*
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