Ggra6212.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6212.t1
Unique NameGgra6212.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..44
NoneNo IPR availableTMHMMTMhelixcoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 98..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:77469..77930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6212.t1Ggra6212.t1Gracilaria gracilis GNS1m malemRNAtig00000167_pilon 77469..77930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6212.t1 ID=Ggra6212.t1|Name=Ggra6212.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MTGAAARERIAQPSTDAVMVLWFVLLAMTGAAARGRIAQPSTDAVMGLWF
VLLAMTGAAAQERIAQPSTDAVMGLWFVRLAMTGAAAQERIAQPSTDAVM
GLWFVLLAMTAAVVPSLTTRQLVVVVQVLFVLVGDAKRHLAAGVAGIKHM
INY*
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