Ggra6161.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6161.t1
Unique NameGgra6161.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6161.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..163
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 9..102
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:718236..718799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6161.t1Ggra6161.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 718236..718799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6161.t1 ID=Ggra6161.t1|Name=Ggra6161.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MSRGVFQLVLCLLLMFQLSVPKSSGSQKAILALRALLGRKASLCRFSCLL
QMKVALLSALLITTPVFAIPFGAVFLCRSMHKRDMTAMLLCSSGATLIAY
DSVAGTSGSQVSLTAVLTGLSSAALAAGTYVTVRIMGAGVHFILNIFAIS
IANILVPISIVGMREHRITSPLHFFQEEIKRFDVWST*
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