Ggra616.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra616.t1
Unique NameGgra616.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length234
Homology
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BLAST of Ggra616.t1 vs. uniprot
Match: A0A2V3IRW5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW5_9FLOR)

HSP 1 Score: 187 bits (474), Expect = 4.790e-52
Identity = 116/238 (48.74%), Postives = 153/238 (64.29%), Query Frame = 0 
Query:    5 VPPLLNRHNYAVRRTQTEVFYDDNQLFEDT--SEHDQSPIPSSRDSFEEFDIASFFHQQTQAQRQTSVYATNPKPFFAKQSSSVFLPDAVDTYAEGHLLLVCYEHKLELHHV--PSHR--DYNALNECIAPQ---IQKLDSLHLERNSRSLGVQIMFTNVIEVAPLRLLVCTAVNTGVLLVRILRAMSDTSIDKPSLFIERIIPASIAVAGTCVIERPGQNFAEYCAELWIITFDGCL 233
            + PLL R+  AVRR QT+VFYDD QL E T  S H +S    S DS   FDI + F + T +Q + S+   N +PF  K S +   PD +   +EG L+LVC+E  +ELHH+  PS    D N +++  APQ    +K+D + L  N+R+   Q+M T +IE+APL LLVC AVNTGVL VRILR+ + TS+ +PSLF+ER+I    A+ GTCVIERPG   AE+CAELW+ T DG L
Sbjct:  369 ISPLLTRYGNAVRRAQTKVFYDDRQLLEPTHGSPHSESQNLRSPDSGPVFDINAVFDEPTASQHEVSIEFENKQPFALKTSITEDTPDLL---SEGELMLVCFEKSIELHHILPPSDPSPDANGVSQA-APQRRRARKIDRIRL--NTRTCR-QLMVTQIIEIAPLSLLVCIAVNTGVLFVRILRSCTPTSLSEPSLFVERVIKID-AICGTCVIERPGSVLAEFCAELWVFTADGNL 598
The following BLAST results are available for this feature:
BLAST of Ggra616.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRW54.790e-5248.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:54020..54721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra616.t1Ggra616.t1Gracilaria gracilis GNS1m malemRNAtig00000895_pilon 54020..54721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra616.t1 ID=Ggra616.t1|Name=Ggra616.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=234bp
MSNSVPPLLNRHNYAVRRTQTEVFYDDNQLFEDTSEHDQSPIPSSRDSFE
EFDIASFFHQQTQAQRQTSVYATNPKPFFAKQSSSVFLPDAVDTYAEGHL
LLVCYEHKLELHHVPSHRDYNALNECIAPQIQKLDSLHLERNSRSLGVQI
MFTNVIEVAPLRLLVCTAVNTGVLLVRILRAMSDTSIDKPSLFIERIIPA
SIAVAGTCVIERPGQNFAEYCAELWIITFDGCL*
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