Ggra6151.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6151.t1
Unique NameGgra6151.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length635
Homology
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BLAST of Ggra6151.t1 vs. uniprot
Match: A0A2V3IFH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH0_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 2.200e-12
Identity = 69/212 (32.55%), Postives = 101/212 (47.64%), Query Frame = 0 
Query:  424 RKEFRIFTVSPTAGNSVCSWAGEIESPSSSALNVFRKPKRLSNDAPLQVRARSPPRCTRRALSPSITDP----SPIQEPKRTPAQLRRDPVTTEDLVQVIPETPMQTEREKGRGIEQTGGDVLHTEDKIEERVEVVENMNRFTRTGTWRNEYSNGEMDDCSSTQSPCSADMIDKSTQEAHEETANAQDAALYCRPELVTVPSGALRGSDNSD 631
            RK   +  V+  A +S CSW  +  SP+SS + +F++ K    D  +  R RSP  C + A  P  TD     S  +E +   A+ +   +TT+D + + P           R + QT  D ++  +   + VE V            R+  +N   D+CSSTQSP S D      +E  EE    Q+AA+YCR  LV++PSGAL   D SD
Sbjct:  395 RKRACVREVASPADDSNCSWGADGCSPASSEVALFQQKKMECADVAVTERGRSPVVCEQSA--PQQTDSEATRSEEEEEQERGAKWKSGTLTTQDFLVLKP-----------RRVGQTVEDAMNAANVKVDLVEDVVVTQSSVADSNVRSAQTNVSGDECSSTQSPASVDR----KRECAEENEKVQEAAVYCRSVLVSIPSGALVSPDGSD 589
The following BLAST results are available for this feature:
BLAST of Ggra6151.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFH02.200e-1232.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..607
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:669106..671010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6151.t1Ggra6151.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 669106..671010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6151.t1 ID=Ggra6151.t1|Name=Ggra6151.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=635bp
MRRRRVKPLLTRRSPSRRQSAPAKLPLQSTPAPRPHLRVPAPQRHPHIPV
HDPDPIDTPVFTTPRPARKRRVSETPIRPRRVSETPLPSVAHTPAATPEV
QAVVDVIPSQPSTKRARVRCSPSLSDSLSVRAEAAHASVSPVHSSALLAS
PGLLSAHIPLTLKSVFSGGGESSFAPATFGTQRRISFGATAERHSPDQDA
RPRSLSKSPTKRDASPSSGPPRVTSPESQPGFSPEPIQRHISLEEPQQQP
CPEPSYQQPLPEQSQRQPSPEISQRQPPHEQSQQPSPELSHQLPSPEQSP
QQLTPELSHQKPSPEQSQQRLAPELSHRQPSPEQSQQQPSPEQSHQQPSP
EQSQQPSPESQRQQSEACSPYFPPSQRSPQTPNYVPSQPSPLASQPPSSS
QRLQSSFPPKASTKPPPNAGNQDRKEFRIFTVSPTAGNSVCSWAGEIESP
SSSALNVFRKPKRLSNDAPLQVRARSPPRCTRRALSPSITDPSPIQEPKR
TPAQLRRDPVTTEDLVQVIPETPMQTEREKGRGIEQTGGDVLHTEDKIEE
RVEVVENMNRFTRTGTWRNEYSNGEMDDCSSTQSPCSADMIDKSTQEAHE
ETANAQDAALYCRPELVTVPSGALRGSDNSDSPQ*
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