Ggra6142.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6142.t1
Unique NameGgra6142.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length421
Homology
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A2V3IFE6 (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 592 bits (1525), Expect = 1.300e-209
Identity = 297/419 (70.88%), Postives = 352/419 (84.01%), Query Frame = 0
Query:    1 MARLAVLVISALLFSSCFAQKRQMSGDRVVGFFGRFMEVVPGTPVNEECSRLVKHFGEAKPNDDGTVSIATGSIHHNSNKCEKGTMVMYDTPKENPISGVGASDSTFSNLKKSDGFWVGESTRSCGRWKLPNPTAVFMVYDKDTDLVGPFDVPLAKGSTYMIFTNERYTCIYRDVERPSPRPSXXXVEAPKPVDIPPSEADGETFSSAESINDGDTVGVPVTVLPGVPQQDPEASPEDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETESAQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAVI 419
            M R+A + I +LLFS C AQ+R+M+GDRV GFFGRFMEVVPGTPV EECS+LVKHFG+A PND+GTV I TGSI HN NKC +GTM+M+D+P+ NP++GVG +D TF NL+ SDGFWVGESTR+CGRW+LP PTAVFMVYDK+  LVGP++VPL KG TYMIFTN+R+TCIYRDV  PSPRPS XX        + PSEADGETFS+AE INDGDTVGVPVTVLPGVP++  EA+ EDDDGS CFPAD TVE+E G+ K+M+ ++IGDRVRVG S FSEVFMFTH+L++ E  FVKIET+S+ I+LTKGHYL+VNG LAAAKTV+VGD +E+ SGETATV+ V  VK  GLYNPQT+ GDIVV+GIRASTYTTTV+P  AHRLLTP RALY+AFGVATSAF  GA +LAK+AP GAA++
Sbjct:    1 MVRIAAIFIYSLLFSFCVAQQRKMTGDRVEGFFGRFMEVVPGTPVKEECSKLVKHFGQATPNDNGTVLILTGSIQHNGNKCREGTMLMHDSPETNPVAGVGKADETFDNLQVSDGFWVGESTRNCGRWQLPKPTAVFMVYDKNRKLVGPYNVPLEKGFTYMIFTNKRFTCIYRDVPPPSPRPSPXXXXXXX---VAPSEADGETFSAAEDINDGDTVGVPVTVLPGVPKESAEATAEDDDGSTCFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSGISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFERGAVNLAKLAPQGAAIL 416          
BLAST of Ggra6142.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 198 bits (504), Expect = 1.060e-57
Identity = 118/243 (48.56%), Postives = 153/243 (62.96%), Query Frame = 0
Query:  190 PKPVDIPPSEADGETFSSAES--IND---GDTVGVPVTVLPGVPQQDPEASP--------EDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETESAQ-ITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAV 418
            P+P D P    D +    + S  I+D   G   GVP    P       + SP        EDDD S CFPA+A VE+E GATK MS + +GDRVRVG + FS+VFMFTHK   ++Y FV + T+S   ++LTKGHYLYVNG +AAAKTV+ GD + +  G T++V  V    + GLYNPQT+ GDI+V+G+ A+TYTTTVE   AH LL PLRA+Y + G + SA + GA+ LA I P G+ V
Sbjct:    2 PQPSDGPDGMEDSDDMMESPSPDIDDVLTGGADGVPGESEPAATDDLSDLSPSPSLDDEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYSSIGWSMSALDAGADRLAGIVPSGSVV 244          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 194 bits (494), Expect = 1.720e-53
Identity = 104/185 (56.22%), Postives = 126/185 (68.11%), Query Frame = 0
Query:  235 SPEDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETESAQ-ITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAV 418
            SP+DDD + CFPADATV++E G+ KKM D+ +GDRV V    FS VFMFTHKL  V Y FV I+T S   ++LT GHYLYVNG L+AA TVK GD L +       V  V+ V S GL+NPQT+ GDIVV+G++ASTYTT VEP  AH LL+PLRA Y   G +  AF  GA+ +A   P GA V
Sbjct:  301 SPDDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRAAYSRLGFSLRAFEAGADRIASYMPSGALV 485          
BLAST of Ggra6142.t1 vs. uniprot
Match: warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 189 bits (480), Expect = 2.450e-53
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = 0
Query:  235 SPEDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETESAQ-ITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHG 415
            SP   +GS+CFP  A VE+E GA ++M  + IGDRV+VG + FSEVFMFTHK     Y+FVKI T S   ++LT GHY++VNG LAAA  V VGD L++ +GE   V  V  V+S G+YNPQT+ GDIVV GIR STYTT VEP  AH  L  +R++YR FG+  S F  GA+S+A   PHG
Sbjct:  123 SPSAVNGSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFGLTFSMFEQGADSIASFLPHG 304          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 192 bits (488), Expect = 1.160e-52
Identity = 108/218 (49.54%), Postives = 145/218 (66.51%), Query Frame = 0
Query:  208 AESINDGDTVGVPVTVLPGVPQQDPEASPED-----DDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETESAQ-ITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAVI 419
            + +++DG+T    V+ L    Q  PE S ++     DDGSACFPA ATVE+E G+ K M  I +GDRV+V S  FS VFMFTHK+  + Y FV++   S   + LTKGHYLYVNG LAAA++V VGD +E  +G   +V  V  V S GLYNPQT+ G+IVV+G+RASTYTT VE   AH LL PLRA++R  G+ ++  +NG++ LA + P G  ++
Sbjct:  265 SSTVDDGETAVDAVSGLEEEAQISPEGSDDEEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAG-VVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGMTSAMLDNGSDKLASMLPSGGIIV 481          
BLAST of Ggra6142.t1 vs. uniprot
Match: R7QIA6 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR)

HSP 1 Score: 187 bits (475), Expect = 5.860e-51
Identity = 91/175 (52.00%), Postives = 124/175 (70.86%), Query Frame = 0
Query:  242 SACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETES-AQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHG 415
            S CFPADA+VE+E G+ K M+ + +GDRV+V    FS+VFMFTHK  +  ++FV+I T S A ++ T+GHY+Y+N A AAA + KVGD LE+  G    V  V IVK  GL+NPQT+ GDI+V+ +RAST+T T+EP  A  +L PLR LY  FG++T+  NNGA+S+A + P G
Sbjct:  283 SVCFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHDFVRISTRSGASLSATRGHYIYINNAFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLRMLYDTFGISTAFLNNGADSIASVLPKG 457          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A2V3IRZ6 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 1.300e-48
Identity = 92/177 (51.98%), Postives = 128/177 (72.32%), Query Frame = 0
Query:  244 CFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETES-AQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAVI 419
            CFPA+ATVE+E G+TK+M  + IGDRV+VG   FSEVFMFTHK+     +FVK++  S A I+ T GHY+Y+NG LAAA+T KVGD +E+ +G  +TV+ V++V+  GLYNPQT+ GDI+V+ +RAST+TT +E   A  +L PLR +Y  FG +TSAF+ G + + K+   G  V+
Sbjct:  272 CFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNEVRASTFTTAIEAGTAQAMLAPLRMVYDVFGWSTSAFDGGFDMINKLVTKGELVL 448          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A1X6P3Z4 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 176 bits (446), Expect = 1.770e-47
Identity = 104/222 (46.85%), Postives = 137/222 (61.71%), Query Frame = 0
Query:  199 EADGETFSSAESINDGDTVGVPVTVLPGVPQQDPEASPEDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETES-AQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNI-VKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAV 418
            E   +   SA  I  GD  G    V+ G+ + +P  +  DDD   CFPA A VE++ G T  M  +++GD VRV +  FS VF+FTHK+    + FVK+ T S A +T+T+ HY+Y NG + AA  VK+GDELE+       + T    V   GLYNPQT+ GDI V+GIRAST+TT VEP  A  LL PLRAL+RA GV+TSA + G+  LA + P GA+V
Sbjct:  166 EGPSDPTPSASVIVPGD--GSEPDVIEGLSEAEPSPTDGDDD-DVCFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRALFRATGVSTSALDAGSARLAALLPRGASV 384          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A1X6NXN0 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM)

HSP 1 Score: 179 bits (453), Expect = 2.160e-46
Identity = 104/207 (50.24%), Postives = 133/207 (64.25%), Query Frame = 0
Query:  216 TVGVPVTVLPGVPQQDPEASPE-DDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETES-AQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNI---VKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAA 417
            TVG      PG P    E+ P  D+D S CFPADATVE+  G T  M+D+++GD VRV ++ +S VF+FTH++      FV++ T + A +T T GHY+Y NG L AA  V+VGD LE T G+ AT   V     V   GLYNPQT+ GDIVV+GIRASTYT  +EP  A  LL PLRAL+R  G+ T+A + GA+ LA + P GAA
Sbjct:  451 TVGATDERQPGDPAPIDESPPPLDEDDSVCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTAAGASLTATAGHYVYANGRLTAAGAVRVGDRLE-TVGDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLRALFRLAGLTTTALDGGADRLAALLPSGAA 656          
BLAST of Ggra6142.t1 vs. uniprot
Match: A0A1X6P3R7 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3R7_PORUM)

HSP 1 Score: 177 bits (448), Expect = 1.240e-45
Identity = 102/208 (49.04%), Postives = 132/208 (63.46%), Query Frame = 0
Query:  213 DGDTVGVPVTVLPGVPQQDPEASPEDDDGSACFPADATVEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETES-AQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNI-VKSIGLYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSAFNNGAESLAKIAPHGAAV 418
            DGD  GV           D   SP DDD S CFPA A VE++ G T  M  +++GD VRV +  FS VF+FTHK+ +  + FVK+ T S A +T+T+ HY+Y NG + AA  VK+GD+LE+       + T    V   GLYNPQT+ GDIVV+GIRAST+TT VEP  A  LL PLRAL+RA G++TSA + G+  LA + P GA+V
Sbjct:  473 DGDVAGV----------DDALPSPSDDD-SVCFPASAEVELDTGRTVTMDQLAVGDNVRVAADAFSRVFLFTHKIASGSFAFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIITATSPVTETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRALFRATGMSTSALDAGSARLAALLPRGASV 669          
The following BLAST results are available for this feature:
BLAST of Ggra6142.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFE61.300e-20970.88Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
R7Q6191.060e-5748.56HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IX711.720e-5356.22Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD2.450e-5354.95warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A2V3IGP91.160e-5249.54Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QIA65.860e-5152.00HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IRZ61.300e-4851.98Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A1X6P3Z41.770e-4746.85HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6NXN02.160e-4650.24HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3R71.240e-4549.04HintN domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 242..334
e-value: 1.8E-9
score: 47.5
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 242..393
e-value: 7.5E-29
score: 100.7
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 244..372
e-value: 7.9E-33
score: 115.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..245
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 237..396
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 237..396
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..420
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableCDDcd00081Hintcoord: 244..366
e-value: 4.5962E-11
score: 58.4346
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 244..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:651950..653315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6142.t1Ggra6142.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 651950..653315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6142.t1 ID=Ggra6142.t1|Name=Ggra6142.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=421bp
MARLAVLVISALLFSSCFAQKRQMSGDRVVGFFGRFMEVVPGTPVNEECS
RLVKHFGEAKPNDDGTVSIATGSIHHNSNKCEKGTMVMYDTPKENPISGV
GASDSTFSNLKKSDGFWVGESTRSCGRWKLPNPTAVFMVYDKDTDLVGPF
DVPLAKGSTYMIFTNERYTCIYRDVERPSPRPSPQPVEAPKPVDIPPSEA
DGETFSSAESINDGDTVGVPVTVLPGVPQQDPEASPEDDDGSACFPADAT
VEVEGGATKKMSDISIGDRVRVGSSGFSEVFMFTHKLENVEYEFVKIETE
SAQITLTKGHYLYVNGALAAAKTVKVGDELEVTSGETATVQTVNIVKSIG
LYNPQTMCGDIVVDGIRASTYTTTVEPMCAHRLLTPLRALYRAFGVATSA
FNNGAESLAKIAPHGAAVIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf