Ggra6128.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6128.t1
Unique NameGgra6128.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length965
Homology
BLAST of Ggra6128.t1 vs. uniprot
Match: A0A2V3IFH2 (tRNA pseudouridine synthase A, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH2_9FLOR)

HSP 1 Score: 1283 bits (3321), Expect = 0.000e+0
Identity = 660/967 (68.25%), Postives = 778/967 (80.46%), Query Frame = 0
Query:    1 MGSYFS-----HEKAEDSDKQNVEVSNTELLDGDRDQRPRKKRRLSVRKKRIEKLTAPPTRAM---RDITQGNAKAKDLDTASNSETAVGYDDRNHNSSVEMNEKLTVFGKPELQDYDA-----KRMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYVASLYPIKTNLEEFLESNSEDMETLATDLRNLFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGVALRQGSMLAGCLDKTDVIEIQHSRNDLYQSGKLRPDGFRMVLENEDASLDSDWMQYVSWGVKSVFQNIAKGRRTVSGGGRLLLGGDLPLAAGLGSSSSLVTLSALATARLNRKRFPKQELALLAAEGERVGAGTRGGAVDHLISSCAQKGCATRVSFIPKVDINSLRLPSNASLIAVGSLVKARKGFDSYVKEQFNLRAAECRIASAILARRLKVHLEMSVTTPGQLFFQTKRTAKLECRTISALRKKVRDVMDITEEISLDDAKREIGVSEVEFRKRFLIGVEAQSFIVGKRMAHVFSEAERVERFEELLSNNEYDEQEKLCRLGDILREGHESLRVNYESSCKEVDELVAFCLANGAVGSRVTGAGWGGFTINLVPAEKKKSFIELMKTKVGTDSVIDIDPSAGACVYAIHSVLGGTNRK 954
            MGSYFS     HE + D+    V++  +        +RP K+RRL+  K R  K   PPTRAM   RD T       +  ++ +        DR  NSS        + G  ++++ DA     +R RKRK+ VFLGYNGE+YYGMQINPGVVTIE+VLL+ FHKAGLIS+ENK SPGKVQWMRAARTDKGVSAIVQCVS KLE+  +++ D  +I SIN +LPED+QVYG+LRPTGGFNAR +CHRRRYEYIFPVRLLGG NG + E + G+GDPRA KL SILKRFEGTHCFANFT+ LSGS+DAS+RYMI+L+CSQPFKPP SGV+YVS+EI+GQSFLLHQIRKM+GLS+YVY GHAP+ET+SVALCPNVK+HTPMAPALGLLLENL+FDNYNKRFK +LE+PI+SDAF EA++KFK  +VYRRIAEKER ER+LETWVKN R+RFQYK +EI ELHQKFVL+DVGKEEQRK+YVASLYPIKT+L +FL+ ++ +M  +AT L   F ERY V P+F+ARAPGRVNLIGEHLDYNG PVIGVALRQGSMLAGCLD T+VIE+QH R D+Y  GKLR DG RM LENED  LDSDW+QYVSWGVK+    + KG+R VSGGGR+L+ GDLPLA+GL SSSSLVTLSALATARLNRKR PKQE+AL  AEGER+GAGTRGGAVDH IS CA KGCA  VSF P++ + SL LP NA L+AVGS VKARKGFD  VK+QFNLRAAECRIA+AILARRL+VHLE SVTTPGQL FQ K+T+KL+CRTIS LR+K  + M I+E +SL+D K ++GV EVE + RFLIGV+A++F VGKRM+HVFSEAERVE+F ELL+N E D++ KL  +G IL EGH SLR  YESSC EVDELV FCLANGAVGSRVTGAGWGGFTI++VP EKK SF++ +  +VG  SVI+++PS GACV AIH VLGG +RK
Sbjct:    1 MGSYFSRTGEDHETSNDT----VDIQPSNAFGETHGRRPHKRRRLNQEKTRKGKDIPPPTRAMNNSRDNTTQKTMCNEKPSSDDQRLRSDSMDRRGNSSA------VIKGSEDVKEADALKANARRPRKRKFVVFLGYNGEKYYGMQINPGVVTIERVLLSAFHKAGLISDENKESPGKVQWMRAARTDKGVSAIVQCVSAKLEVFPQQINDPQLIASINDHLPEDVQVYGILRPTGGFNARADCHRRRYEYIFPVRLLGGPNGVQKENEVGKGDPRATKLNSILKRFEGTHCFANFTDGLSGSDDASRRYMISLSCSQPFKPPKSGVFYVSVEIYGQSFLLHQIRKMIGLSLYVYHGHAPEETLSVALCPNVKIHTPMAPALGLLLENLIFDNYNKRFKDVLEQPISSDAFREAKMKFKAHEVYRRIAEKERNERVLETWVKNYRERFQYKHEEIRELHQKFVLSDVGKEEQRKQYVASLYPIKTSLSDFLDCDAPEMMKMATALSCQFSERYDVPPTFLARAPGRVNLIGEHLDYNGLPVIGVALRQGSMLAGCLDDTEVIEVQHVRRDVYHRGKLRADGLRMALENEDDRLDSDWIQYVSWGVKAAIAGLPKGKRAVSGGGRVLISGDLPLASGLASSSSLVTLSALATARLNRKRIPKQEIALRGAEGERIGAGTRGGAVDHAISMCASKGCAVHVSFTPRIAVRSLLLPKNAVLVAVGSNVKARKGFDELVKQQFNLRAAECRIAAAILARRLEVHLEKSVTTPGQLLFQAKKTSKLQCRTISTLREKALEAMPISEVVSLEDVKEQLGVQEVELQNRFLIGVKAETFAVGKRMSHVFSEAERVEQFFELLTNEENDDRAKLEGMGRILEEGHRSLRDYYESSCSEVDELVEFCLANGAVGSRVTGAGWGGFTISVVPVEKKDSFLKAVTKRVGKGSVIEVEPSGGACVLAIHGVLGGPDRK 957          
BLAST of Ggra6128.t1 vs. uniprot
Match: R7QUC6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUC6_CHOCR)

HSP 1 Score: 976 bits (2524), Expect = 0.000e+0
Identity = 488/844 (57.82%), Postives = 634/844 (75.12%), Query Frame = 0
Query:  113 RMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYVASLYPIKTNLEEFLESNSEDMETLATDLRNLFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGVALRQGSMLAGCLDKTDVIEIQHSRNDLYQSGKLRPDGFRM-VLENEDASL-DSDWMQYVSWGVKSVFQNIAKGRRTVSGGGRLLLGGDLPLAAGLGSSSSLVTLSALATARLNRKRFPKQELALLAAEGERVGAGTRGGAVDHLISSCAQKGCATRVSFIPKVDINSLRLPSNASLIAVGSLVKARKGFDSYVKEQFNLRAAECRIASAILARRLKVHLEMSVTTPGQLFFQTKRTAKLECRTISALRKKVRDVMDITEEISLDDAKREIGVSEVEFRKRFLIGVEAQSFIVGKRMAHVFSEAERVERFEELLSNNEYDEQEKLCRLGDILREGHESLRVNYESSCKEVDELVAFCLANGAVGSRVTGAGWGGFTINLVPAEKKKSFIELMKTKVGTDSVIDIDPSAGACVYAIHSVLGGTNRK 954
            + RKRK AVFLGY GE YYGMQ+NPGV+TIEQVLL+ F++AGLIS  NK S  KV WMRAARTDKGVSA  QCVS KLE   EK     V+++IN++LP D+ VYGL+R T  FNAR++CHRRRYEY+FPVRLLGG N    E + G GDPRAA+ T+ILKR+EGTHCFA+FT+ L+G +D+S+R+MI + C QPF PP SGVYYVS+E++GQSFLLHQIRKMVGL+++++LGHAP+ETI VALCPN+K+ TPMAPALGLLL+ L F+NYN R + +LE+PIT D F EA+ KFK +++Y++IAE+ER ERILETWV+ C  + +Y  DEI +LH+KFVLTD G+EEQR+ ++ASLYPIKTN+  FL+   E+   LA  ++  F+ RYG  PSF+ARAPGRV LIGEHLDYNG PVI +A  QG+M AGCLD T+ IE+ H  N  Y  G  R  G RM V E+E  SL D +W+QYVSWG+K++ +++   +RTV+GGGRLL+GG+LP A G+ SSSSLV  SAL  ARLNRKR PKQE+ALLAA  ER GAGT+GGAVDH+ S C  +  A ++SF P V I+ + +P   +L AV S V+A KGFD  V+ +FN+RAAECRI +AILARRLKVHL  SVTTPGQL FQ  +T+ L+CR++S LR    +VM   E +SL + ++E+G++E+E + RF++GV+   F VG+RM+HVFSEA RVE F  +  ++      +L + G IL EG  SL+  +ESSC EVD++V FC  +GAVGSR+TGAGWGG+TINLVP ++   F   +    G ++V+++ P++G C++AIH   G  +R+
Sbjct:   27 KRRKRKVAVFLGYIGENYYGMQMNPGVITIEQVLLSAFYRAGLISEANKDSLSKVNWMRAARTDKGVSAAGQCVSAKLECEVEKNIAPGVVEAINHHLPADVMVYGLMRATAAFNARMDCHRRRYEYMFPVRLLGGPNEVMKEEEPGAGDPRAARFTNILKRYEGTHCFASFTDGLTGKDDSSRRFMIRVRCGQPFLPPNSGVYYVSVEVYGQSFLLHQIRKMVGLALFIHLGHAPEETIPVALCPNMKIPTPMAPALGLLLDTLTFENYNLRHQSVLEKPITVDQFREAKEKFKLERIYKKIAERERLERILETWVRTCHQKQRYDADEIGKLHEKFVLTDDGREEQRRAHIASLYPIKTNMRAFLDVPDEETFRLAKAMKEQFQVRYGEEPSFLARAPGRVILIGEHLDYNGLPVITLATTQGTMFAGCLDSTEHIEVCHVENSRYGPGMFRNSGTRMAVSEDEKVSLVDRNWLQYVSWGIKALVESLPMSKRTVTGGGRLLVGGNLPRAGGMSSSSSLVAGSALVAARLNRKRIPKQEIALLAARAERDGAGTKGGAVDHITSLCGVRESALKISFTPHVVIDKVEIPDGVALFAVNSGVRAEKGFDDRVRSEFNMRAAECRIGAAILARRLKVHLCKSVTTPGQLLFQACKTSILKCRSMSQLRTIAFEVMQNDEILSLSEVRQELGLAEIELQNRFVMGVQGSIFEVGRRMSHVFSEAVRVEDFVRVSMDHNSAPSVRLQQFGRILNEGQTSLKEVFESSCPEVDQVVDFCRKSGAVGSRMTGAGWGGYTINLVPKDRASHFKHAVTEMYGNEAVVEVTPNSGGCIFAIHKSYGTGDRE 870          
BLAST of Ggra6128.t1 vs. uniprot
Match: A0A7S2ZYH9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYH9_9RHOD)

HSP 1 Score: 318 bits (815), Expect = 4.640e-91
Identity = 244/799 (30.54%), Postives = 393/799 (49.19%), Query Frame = 0
Query:  115 RKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYVASLYPIKTNLEEFLE----SNSEDMETLATDLRNLFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGVALRQGSMLAGCLDK-TDVIEIQHSRNDLYQSGKLRPDGFRMVLENEDASLDSDWMQYVSW--GVKSVFQNIAKGRRT-VSGGGRLLLGGDL-PLAAGLGSSSSLVTLSALATARLNRKRFPKQELALLAAEGERVGAGTRGGAVDHLISSCAQKGCATRVSFIPKVDINSLRLPSNASLIAVGSLVKARKGFDSYV-----KEQFNLRAAECRIASAILARRLKVHLEMSVTTPGQLFFQTKRTAKLECRTISALRKKVRDVMDITEEISLDDAKREIGVSEVEFRKRFLIGVE-AQSFIVGKRMAHVFSEAERVERFEELLSNNEYDEQEKLCRLGDILREGHESLRVNYESSCKE-VDELVAFCLANGAVGSRVT 897
            +KR+  +F+GY G  Y GMQ N    TIE  L+        + +  +    K++W R+ARTDKGVSA  Q VS  L+   +    QS++D IN +LPEDI VYG +R TG F+A+ +C RRRYEY+ P   LG  +    ++       R A+   IL R+ G+H F NFT+ + G +  ++RY++   CS+PF    S   ++ + + GQSF+LHQIRKMVGL++ V+    P ET+ + +    KL TP APALGLLL    F  YN+R++  L +PI  D F E    FK   +Y  IA +E   R ++ W+    +        I+   +         EE+RK  + SLYP+  +L+   +    +  +  +     ++  F+  +G +PS + R PG   LIG+ L+    P IG AL  G + A      ++ + + HS  DL  +  LRP+G RM    +   ++   M  + W  GV        KG R  +    R+++GG+L P    LG  S+ +  + L    L+  + P+ E+A +    E+ G G+  G + +L S   +      +S  PK+  ++++LPS  SL+ +      R G  S+      K+  ++  AE  +AS I++ R     E    +  Q+  Q K +  LE   I              E +SL+    E+G+ E+E  +R   G++  Q   +G        EA+ V R   +L  +E   + +   +G +L +  E++R   ES+  E   ++V  C+  GA+ +R++
Sbjct:   22 KKRRVVLFMGYLGSGYQGMQRNRDAKTIEGELMRALVNTACVPDHLQDDYAKLKWSRSARTDKGVSAAGQVVSADLKCEVDGQLSQSLLDQINESLPEDITVYGWMRATGSFSAKADCVRRRYEYLLPTSGLGQEDVDNEKVVSA----RIARFNVILARYTGSHLFHNFTDKMKGDDPTAQRYILECTCSEPFTIQNSS--FLKVSLVGQSFVLHQIRKMVGLALQVFWSGLPPETLDLFMSAEKKLQTPTAPALGLLLSECFFIFYNRRYQKELRKPIALDHFRETAEDFKRSHIYSFIASEEARTRSMKKWISLLPESIPLDSCTIIGDVEMLSNAKREAEERRKRRLESLYPVFEDLDSVFQIQDVAELQQRKNTVLQMKQTFDREFGYSPSSIVRVPGSAILIGDWLELLELPCIGFALPDGVLTAVAKSSDSENVRVNHSNEDLADA-VLRPNGCRMASTEDSTKVEWSRMFSLGWQCGVSG------KGMRPKMLPAARVMIGGELGPSDNELGVDSAYLLAALLTFMDLHSWKMPRLEMAKMGFGWEKQGRGSATGLMKYLCSLEGKHNQLLLISITPKLCTSNVKLPSMISLVMI------RLGNRSHAEVERRKKTRDMIKAEISVASRIISVR-SGRGEGPQKSLAQVI-QDKPSEVLEACGIGP-----------DEVVSLELVMVELGI-ELEVLERQEPGIKHLQEIRLGLVTRCAAMEAQCVGRVYSILERSEDLSRLEFMEIGKLLNDS-ETIRRKLESTSDEQATQVVEKCIEKGALSARLS 786          
BLAST of Ggra6128.t1 vs. uniprot
Match: A0A7S1ET85 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET85_9RHOD)

HSP 1 Score: 279 bits (713), Expect = 2.360e-78
Identity = 174/450 (38.67%), Postives = 265/450 (58.89%), Query Frame = 0
Query:  114 MRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFE-KMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVR-LLGGTNGTETELKHGEGDP---RAA--KLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLAC-SQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERP--ITSDAFEEARLKFKNQQVYRRIAEKEREE------RILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYVASLYPIKTNLEE-FLESNSED-----METLATDLRNLFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGVALRQGSMLA 541
            ++KRK A+F+ Y GE Y GMQ NPGV TIE  L    ++AG IS +N G   KV W RAARTDKGVSA  Q VSLK++   + ++ +  +++ IN NLP+ I+  GL + TGGF AR +C RR+YEY+ P+  L   T   E + ++   D    RAA  K   IL+++EGTH F NFTE LS  + ++ R+MI++ C S+  +     +  + + + GQSF+LHQIR M+GL++ ++   AP E I VAL  + K+  PMAPALGLLL+  +FD YN+RF  +L +   I S +F   +  FK   +Y  IA+ E E+        +E W+K   + F+Y  ++I   ++      + +E+ RK   ++ YPI  + E+ FL ++S       +E++   +R  +E+RY +TP +++R P  V + G  +D+ G PV+G A    S +A
Sbjct:   47 LKKRKVALFVSYLGEGYSGMQKNPGVRTIEDELEYAVYQAGGISKDNYGQLQKVHWSRAARTDKGVSAAGQVVSLKMQCEKDGEVQESELVERINENLPQTIRAIGLRKSTGGFCARADCDRRKYEYLLPINALFPVTEHKEAQQQNNSEDLDSIRAAVDKFNLILRKYEGTHKFHNFTEKLSPEDGSASRFMISVRCDSEVLRIDEYNL--LRVILIGQSFVLHQIRNMIGLALMIHHQKAPPEAIDVALSSDGKVLVPMAPALGLLLDECMFDRYNQRFSSLLSKSGLIDSLSFSNTKEAFKRSVIYPHIAKIEHEKVPGTELGNMEYWLKKSFNGFRYDFNDIASQYENLCGKSMNREKSRKMQSSNHYPIYDHSEQLFLPAHSAPDSLARVESIVATIRGAYEKRYQMTPEYLSRVPCSVVVSGAFMDHLGLPVLGFATDVCSCVA 494          
BLAST of Ggra6128.t1 vs. uniprot
Match: C1N7G7 (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N7G7_MICPC)

HSP 1 Score: 223 bits (567), Expect = 5.850e-62
Identity = 130/317 (41.01%), Postives = 176/317 (55.52%), Query Frame = 0
Query:  116 KRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLG--GTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVK 430
            KRK A+FL Y G+ Y GMQ NPG VTIE  L      AG IS+ N G   KVQWMRAARTDKGVSA+ QCVSL++ +         VID +N  LPE  + +G  R TGGFNA+  C RRRYEY+ PV+       N  +        +    ++  IL  + GTH F NFT  +S  E ++ RY+I+  CS PF     GV +V   + GQSF+LHQIRK++G+ + V  G   +E    AL     ++ PMAP LGL L   ++  YN R+      P++ +   +    FK   +Y  +A  E EE+ +E W++
Sbjct:    1 KRKVAIFLAYVGKGYQGMQRNPGAVTIEDELEKAIVAAGGISDLNAGDFAKVQWMRAARTDKGVSAVGQCVSLRMVID-----PPGVIDRVNAALPEGFEFFGYERVTGGFNAKTMCDRRRYEYVVPVKAFDPRAKNSDDASPPFEFDETMRQRVNKILGNYVGTHNFHNFTVRVSPDEPSAMRYIISFDCSAPFVV--DGVAFVRCVVVGQSFMLHQIRKLIGMMLGVIRGAWSEEDQLFALNTKESVNVPMAPELGLFLCECIYHAYNVRYAST-HPPLSLENHRDKVETFKRVHIYPHMARTETEEQTMENWIR 309          
BLAST of Ggra6128.t1 vs. uniprot
Match: I0Z8C0 (Pseudouridine synthase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z8C0_COCSC)

HSP 1 Score: 223 bits (567), Expect = 6.020e-62
Identity = 131/308 (42.53%), Postives = 179/308 (58.12%), Query Frame = 0
Query:  115 RKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRL-LGGTNGTETELKHGEGDPR-----AAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIA 416
            +KRK AVF+ + G  Y GMQ NPG  TIE  L +  +KAG IS+EN G   KVQW RAARTDKGVSA    VSLK+ + F        ++ IN +LPE I+V G  R T  F+AR +C RRRYEYI P  + + G          G    R      A+L  +L  FEGTH F N+T  +  S+ A+KRY+++  C+      G    +V + + GQSF+LHQIRK+VG ++ V  G A  + I++AL P   + TPMAP LGL L+  VF++YN R+ +  E  +   AF++    FK +++Y  IA
Sbjct:    1 KKRKVAVFVAFVGAGYSGMQHNPGCKTIEGELGSAMNKAGAISDENAGDFSKVQWNRAARTDKGVSAAGNVVSLKMMIAFP-----DTVERINSHLPEQIRVLGFTRVTNSFDARKHCDRRRYEYILPAFITIDGAAAAAAAEAAGSRQCRFSAEQQARLNEVLGAFEGTHSFHNYTVRVPASDPAAKRYILSFKCAGTMNLEGQ--QWVRMVVVGQSFMLHQIRKLVGTAVAVMRGVATPDAITLALDPARVVVTPMAPELGLFLDECVFESYNDRWGNDREACVRLAAFQDQVDAFKRERIYPHIA 301          
BLAST of Ggra6128.t1 vs. uniprot
Match: A0A5B8MCV0 (tRNA pseudouridine synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCV0_9CHLO)

HSP 1 Score: 225 bits (573), Expect = 2.680e-61
Identity = 135/343 (39.36%), Postives = 188/343 (54.81%), Query Frame = 0
Query:  113 RMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLL---------------------GGTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVKNCRD 434
            +M+KRK A+++GY G  Y GMQ NPG  TIE VL    H+AG IS+ N G   K+ WMRAARTDKGVSA    VSLK+ L  E      +++ IN  LP+D++V+G  R T GF AR  C RRRY Y+ P+  L                     G T G ET     E      +   ILK +EGTH F +FT+  + +E  ++RY++N   ++ F+   +G  YV  E+ GQSFL HQIRKM+GL++ +    AP+  + +AL    K + P+AP   L LE  VF++YNK+  H L   ++ D F +    FK   + R I E E     + TW++  +D
Sbjct:   71 KMKKRKVALYIGYYGAAYQGMQRNPGAHTIEDVLEKAIHEAGGISDNNFGELQKISWMRAARTDKGVSAACNVVSLKMVLEPE-----GIVERINEKLPDDVRVFGYFRVTNGFCARKMCDRRRYGYVLPLWALDPSHPVRGNKRQKTSEGSGPGGATTGEETGRAREE--EILERFNRILKEYEGTHNFHSFTKGKAWNEPQAQRYILNWK-TETFEL--NGETYVKCEVLGQSFLYHQIRKMIGLALAISRNIAPESVLGLALASRKKFNVPVAPEFPLYLEECVFNSYNKKHGH-LHGDLSRDRFVDTINDFKRTTIDRNIVESEEFNDDVSTWLRGLKD 402          
BLAST of Ggra6128.t1 vs. uniprot
Match: A4S9Q6 (PseudoU_synth_1 domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9Q6_OSTLU)

HSP 1 Score: 220 bits (561), Expect = 3.440e-61
Identity = 128/316 (40.51%), Postives = 178/316 (56.33%), Query Frame = 0
Query:  115 RKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTNGTETELK-HGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWV 429
            +KRK AV   Y G  Y GMQ NPGV TIE  L     +AG IS+ N G   KVQW RAARTDKGVSA+ Q V+LK+ L         +++ IN  LPE  +V+G+ R TGGFNA+  C RRRYEY+ P R      G E   +     +   +++  +LK + GTH F N+T  +  ++  +KRY+I+  CS PF+  G    +V  ++ GQSF+LHQIRK++G  + V  G   ++    AL  +  + TPMAP LGL L   ++  YN +F  + E       + E    FK   VY  IA++EREE  ++ W+
Sbjct:    1 KKRKCAVTFAYVGAGYAGMQRNPGVRTIEGELEGAIARAGGISDANAGDFAKVQWTRAARTDKGVSAVGQVVALKMVLE-----PSGMVERINAALPERFEVFGIDRVTGGFNAKTMCDRRRYEYVIPTRAFDPNLGAEGAAEAFAFTEETRSRVDGVLKNYCGTHNFHNYTVKVKPTDAQAKRYIISFECSAPFEVEGE--QFVRCQVVGQSFMLHQIRKLIGTMLAVVRGELTEDDQKFALLTHEFVPTPMAPELGLFLCECIYKAYNDKFGGVHEN-FELAKYSERSESFKQTHVYPHIAKQEREESTMQNWI 308          
BLAST of Ggra6128.t1 vs. uniprot
Match: M2XVR2 (tRNA pseudouridine synthase A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVR2_GALSU)

HSP 1 Score: 229 bits (583), Expect = 7.290e-59
Identity = 140/368 (38.04%), Postives = 207/368 (56.25%), Query Frame = 0
Query:  109 YDAKRMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPV-RLLGGTNGTETELKHGEGD----PRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFEE-ARLK-----FKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYV 465
            +++   ++ K+A+ +GY G  Y GMQ NPG V+IE  L       GLI N  +G+  K++W RAARTDKGVSA  Q VS  L +  +   +Q ++  +N  LP DI++ G+   +GGF+A+  C RRRY Y+FP   L       E  LK  +       +   L  +LK F GTH F NFT   + S    +RY++   CS PF   G    ++++ + GQSFLLHQIRKM+GL+I V  G  P E  +V+L  + +L TPMAP+LGL L+  +F+ YN+R   IL+    S A EE AR++     FK Q +Y  IA +ERE  ++E W+     +       I+  H++ +  ++  + +RKEY+
Sbjct:   77 HNSNSKKRHKFAIVIGYLGAAYQGMQRNPGAVSIEGELEKALVATGLIPNNLEGNLRKIEWSRAARTDKGVSAAGQVVSTYLLVDKDFEREQDILKRVNDTLPTDIRILGVYSVSGGFHAKNACDRRRYSYMFPSWTLCRSKQEHEKMLKDSDYKNIMKAKVDDLNDLLKYFIGTHHFHNFTVGQTSSNGTCQRYILEFFCSLPFFIGGES--FLNVTVVGQSFLLHQIRKMIGLAIAVSKGWIPKEAFNVSLSKHHRLETPMAPSLGLFLDECLFERYNER---ILKNHSDSPAVEELARIRQRAELFKRQIIYEYIACQEREHHVMERWMFLVSTKHPVDVSSIMTKHEELMNQEIILDRKRKEYM 439          
BLAST of Ggra6128.t1 vs. uniprot
Match: tRNA pseudouridine synthase A isoform X1 n=2 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4F4501 (tRNA pseudouridine synthase A isoform X1 n=2 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4F4501)

HSP 1 Score: 216 bits (551), Expect = 4.280e-58
Identity = 135/387 (34.88%), Postives = 212/387 (54.78%), Query Frame = 0
Query:  110 DAKRMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGFHKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQSVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTNGTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMINLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDETISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHI-LERPITSDAFEEARLKFKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKFVLTDVGKEEQRKEYVASLYPIKTNLEEFLESNSEDMETLATDLRN 495
            + +R++++K A+ + Y+G+ Y GMQ NPG  TIE+ LL    +AG I  E   SP ++Q+ RAARTDKGVSA  Q +SLKL        + +    IN +LP+ I+V+ + R T GFN++  C  R Y Y  P        G E              + S+LK FEGTH F NFT      + ++ RY++N  C +PF      + + +I+I GQSF+LHQIRKM+GL++ V  GH   ETI+ +  P+ ++  PMAP +GL+LE + +D YNKR+ +  L  P+T D  E+  + F+ + +Y  I   E  E+    W+          R++  EL     +++V  + ++ +       +KT+   F+ ++SE+ E +A  L+N
Sbjct:   69 EKERVKRKKVAMLVSYSGQGYLGMQRNPGAKTIEEDLLTAMLRAGFIPEEAFTSPQQIQFQRAARTDKGVSAARQILSLKLP-------EGANTSDINKHLPDQIRVFAIKRTTKGFNSKSACDARTYSYTLPTFAFMPA-GEEVSENFRVSSAIVNNVNSVLKMFEGTHNFHNFTSRKKPLDPSAHRYIMNFVCGEPFT--SENMEFCTIKIKGQSFMLHQIRKMIGLAVAVSRGHTTIETINKSWKPD-RIDIPMAPGVGLVLEEVHYDRYNKRYGNDGLHEPLTWDDVEKELITFREKYIYSAIVNTEISEKCFLNWLLTLPYHSYDIRNQNAELDNSSPISEVYNKNEKVDEST----LKTSNSAFV-ADSENAEVIAPSLKN 439          
The following BLAST results are available for this feature:
BLAST of Ggra6128.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFH20.000e+068.25tRNA pseudouridine synthase A, mitochondrial n=1 T... [more]
R7QUC60.000e+057.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZYH94.640e-9130.54Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1ET852.360e-7838.67Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
C1N7G75.850e-6241.01Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
I0Z8C06.020e-6242.53Pseudouridine synthase (Fragment) n=1 Tax=Coccomyx... [more]
A0A5B8MCV02.680e-6139.36tRNA pseudouridine synthase n=1 Tax=Chloropicon pr... [more]
A4S9Q63.440e-6140.51PseudoU_synth_1 domain-containing protein (Fragmen... [more]
M2XVR27.290e-5938.04tRNA pseudouridine synthase A n=1 Tax=Galdieria su... [more]
tRNA pseudouridine synthase A isoform X1 n=2 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4F45014.280e-5834.88tRNA pseudouridine synthase A isoform X1 n=2 Tax=S... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000705GalactokinasePRINTSPR00473GALCTOKINASEcoord: 824..838
score: 42.0
coord: 513..531
score: 67.11
coord: 610..628
score: 41.32
NoneNo IPR availablePRINTSPR00959MEVGALKINASEcoord: 617..639
score: 38.36
coord: 660..679
score: 25.44
coord: 511..535
score: 52.59
coord: 893..910
score: 54.08
NoneNo IPR availableGENE3D1.20.1440.340coord: 726..873
e-value: 3.0E-105
score: 354.2
NoneNo IPR availableGENE3D3.30.70.3170coord: 699..924
e-value: 3.0E-105
score: 354.2
NoneNo IPR availablePIRSRPIRSR001430-2PIRSR001430-2coord: 166..374
e-value: 4.0E-27
score: 93.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
NoneNo IPR availablePANTHERPTHR11142:SF4TRNA PSEUDOURIDINE SYNTHASE Acoord: 99..439
IPR013750GHMP kinase, C-terminal domainPFAMPF08544GHMP_kinases_Ccoord: 856..909
e-value: 5.9E-7
score: 29.8
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 615..676
e-value: 2.3E-8
score: 34.1
IPR019539Galactokinase, N-terminal domainPFAMPF10509GalKase_gal_bdgcoord: 496..541
e-value: 5.7E-17
score: 61.0
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 107..232
e-value: 1.2E-28
score: 101.6
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 496..698
e-value: 3.0E-105
score: 354.2
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 272..380
e-value: 1.9E-9
score: 38.0
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 233..464
e-value: 1.0E-44
score: 154.5
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 99..439
IPR006203GHMP kinase, ATP-binding, conserved sitePROSITEPS00627GHMP_KINASES_ATPcoord: 619..630
IPR019741Galactokinase, conserved sitePROSITEPS00106GALACTOKINASEcoord: 513..524
IPR041708Pseudouridine synthase PUS1/ PUS2-likeCDDcd02568PseudoU_synth_PUS1_PUS2coord: 123..379
e-value: 6.74758E-83
score: 266.016
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 722..925
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 485..701
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 115..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:616661..619555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6128.t1Ggra6128.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 616661..619555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6128.t1 ID=Ggra6128.t1|Name=Ggra6128.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=965bp
MGSYFSHEKAEDSDKQNVEVSNTELLDGDRDQRPRKKRRLSVRKKRIEKL
TAPPTRAMRDITQGNAKAKDLDTASNSETAVGYDDRNHNSSVEMNEKLTV
FGKPELQDYDAKRMRKRKYAVFLGYNGERYYGMQINPGVVTIEQVLLAGF
HKAGLISNENKGSPGKVQWMRAARTDKGVSAIVQCVSLKLELPFEKMYDQ
SVIDSINYNLPEDIQVYGLLRPTGGFNARLNCHRRRYEYIFPVRLLGGTN
GTETELKHGEGDPRAAKLTSILKRFEGTHCFANFTEALSGSEDASKRYMI
NLACSQPFKPPGSGVYYVSIEIFGQSFLLHQIRKMVGLSIYVYLGHAPDE
TISVALCPNVKLHTPMAPALGLLLENLVFDNYNKRFKHILERPITSDAFE
EARLKFKNQQVYRRIAEKEREERILETWVKNCRDRFQYKRDEILELHQKF
VLTDVGKEEQRKEYVASLYPIKTNLEEFLESNSEDMETLATDLRNLFEER
YGVTPSFMARAPGRVNLIGEHLDYNGFPVIGVALRQGSMLAGCLDKTDVI
EIQHSRNDLYQSGKLRPDGFRMVLENEDASLDSDWMQYVSWGVKSVFQNI
AKGRRTVSGGGRLLLGGDLPLAAGLGSSSSLVTLSALATARLNRKRFPKQ
ELALLAAEGERVGAGTRGGAVDHLISSCAQKGCATRVSFIPKVDINSLRL
PSNASLIAVGSLVKARKGFDSYVKEQFNLRAAECRIASAILARRLKVHLE
MSVTTPGQLFFQTKRTAKLECRTISALRKKVRDVMDITEEISLDDAKREI
GVSEVEFRKRFLIGVEAQSFIVGKRMAHVFSEAERVERFEELLSNNEYDE
QEKLCRLGDILREGHESLRVNYESSCKEVDELVAFCLANGAVGSRVTGAG
WGGFTINLVPAEKKKSFIELMKTKVGTDSVIDIDPSAGACVYAIHSVLGG
TNRKTALESSTPVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000705Galactokinase
IPR013750GHMP_kinase_C_dom
IPR006204GHMP_kinase_N_dom
IPR019539GalKase_N
IPR020094TruA/RsuA/RluB/E/F_N
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR006203GHMP_knse_ATP-bd_CS
IPR019741Galactokinase_CS
IPR041708PUS1/PUS2-like
IPR036554GHMP_kinase_C_sf
IPR020568Ribosomal_S5_D2-typ_fold
IPR020103PsdUridine_synth_cat_dom_sf