Ggra6116.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6116.t1
Unique NameGgra6116.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length228
Homology
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2V3ILR1 (Pseudouridine-5'-phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR1_9FLOR)

HSP 1 Score: 330 bits (846), Expect = 1.670e-112
Identity = 163/221 (73.76%), Postives = 182/221 (82.35%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFPPLPK 221
            M SVIWDMDGVLLDSEPIY RVE ++VS+YGK I PI+P LLGRTA  CA+ITV++L LP+TP Q+LA+RN QLL+EMK    LPG    VRHL+Q GVK AIATSSPRDLLIAKQ GK+ FF  FDA++CGDDV  GKPDPQIFL AA AI E PSNC VFEDAPAG +AARLAGMK VALP+ H DIKLYQD+DPL  VPSACLLD D+SLLGFPPLPK
Sbjct:    1 MNSVIWDMDGVLLDSEPIYERVEQAVVSQYGKNIAPIIPQLLGRTAPTCAQITVQQLNLPITPAQYLAQRNAQLLVEMKKVHFLPGVQRTVRHLRQQGVKQAIATSSPRDLLIAKQHGKQHFFHLFDALVCGDDVTHGKPDPQIFLSAARAIGEAPSNCVVFEDAPAGCKAARLAGMKCVALPSHHADIKLYQDEDPLLIVPSACLLDVDLSLLGFPPLPK 221          
BLAST of Ggra6116.t1 vs. uniprot
Match: R7QR89 (HAD-like hydrolase family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR89_CHOCR)

HSP 1 Score: 302 bits (773), Expect = 1.870e-101
Identity = 154/219 (70.32%), Postives = 175/219 (79.91%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFPPL 219
            M +VIWDMDGVLLDSEPIY  VE SI SRYGK +R IL  LLGRTA  CAKITV++LQLPLT EQ+L ERNK LL +MKS  ILPG   IVRHL+  GV+ AIATSSP DLL +K+ GK+ FF  FDA++CGDDV  GKPDP+IFL+AAAAID +PSNC VFEDAPAG  AARLAGMK VALPN HVDI LY  ++P  TVP+A LLDFDI+ LGFPP+
Sbjct:    1 MLNVIWDMDGVLLDSEPIYLEVEDSIASRYGKDVRTILSKLLGRTAPACAKITVDELQLPLTAEQYLDERNKLLLEKMKSVKILPGVEAIVRHLRNIGVRCAIATSSPFDLLQSKKYGKDDFFALFDALVCGDDVVNGKPDPEIFLRAAAAIDAEPSNCVVFEDAPAGCRAARLAGMKCVALPNPHVDIGLYNAEEPQITVPTANLLDFDITSLGFPPM 219          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A7S2ZSY8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSY8_9RHOD)

HSP 1 Score: 180 bits (457), Expect = 2.340e-53
Identity = 98/218 (44.95%), Postives = 133/218 (61.01%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGK-QIRPILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFP 217
            M +VI+D+DG LLD+E IY  VE  IVS++G   +  +   LLG T    A+I ++  +  LT EQ+L  RN +LL  +  A +LPGA ++V HL   GVK+AIATSSP  LL AK+     FF +F A++C DDV  GKPDP+IFL+AA  ID  P +C VFEDAPAG++++  AGM+ + L N H +   Y   D L       + +FD    G P
Sbjct:   19 MVAVIFDLDGTLLDTETIYLEVEKEIVSKFGGGDVTEVTHKLLGTTESRTAEIIIDHFKFDLTVEQYLKARNSKLLEIVHRAQLLPGADELVSHLSSRGVKIAIATSSPTALLAAKREAHPDFFSKFLAVVCADDVKRGKPDPEIFLRAAELIDVHPKDCLVFEDAPAGVQSSLGAGMRCIGLKNEHTEASKYDGVDELL----GSITEFDPVKYGLP 232          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2D4RS96 (HAD family hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2D4RS96_9DELT)

HSP 1 Score: 162 bits (411), Expect = 1.440e-46
Identity = 92/220 (41.82%), Postives = 127/220 (57.73%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIR-PILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGD--DVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFP 217
            + ++++DMDG+LLD+E  Y  V   IVSRYGK     I   +LGR A   A+  V  L+LP+ PE +L ER   L      A  +PGA+ + + +K  GV  A+ATSS ++    K T  + +F +FDAI+ GD  D+  GKP P IFL AA  +   P+ C VFEDAPAG+EAAR AGM  V +P+  +D K+ +D D         LL+F+ S    P
Sbjct:    7 INAILYDMDGLLLDTENFYTDVTQQIVSRYGKNFDWSIKSQMLGRPALESARTLVRVLELPIRPEDYLTERKALLNQRFPEAEAMPGAIKLTQRMKMAGVPQAVATSSTKEAYTLKTTKHQKWFAEFDAIVTGDHPDIQNGKPAPDIFLAAARKLGVAPNECLVFEDAPAGVEAARAAGMSVVVVPDPQMDKKMVKDADQKLN----SLLEFEPSDWSLP 222          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A661CSF8 (HAD family hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CSF8_9GAMM)

HSP 1 Score: 161 bits (408), Expect = 4.460e-46
Identity = 89/199 (44.72%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIR-PILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPL 198
            +  +I+DMDGVLLD+EP Y +V  +I  +YGKQ    I    +G+ +   A+I V+ L LP+TPE +LAER  +L     SA  LPGAV +++H KQ G+  A+ATSS +     K T  + +F  FD I  G+ V  GKP P IFL AA A+   P NC VFED+PAG+EAA  A M  VA+P+  +D    Q  D +
Sbjct:    6 ITHIIYDMDGVLLDTEPFYTQVNQAIAQKYGKQFDWAIKSQTMGKKSIDSARIWVKSLDLPITPEAYLAERTSKLEQLFPSAQPLPGAVRLIQHFKQQGIPQALATSSTQHTFHLKTTHHKDWFSLFDVIFTGEAVKQGKPAPDIFLAAAQALQGSPPNCLVFEDSPAGIEAAIAAKMSVVAVPDPRLDKTFCQGADQI 204          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2E5C1N3 (HAD family hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5C1N3_9DELT)

HSP 1 Score: 159 bits (401), Expect = 4.760e-45
Identity = 93/224 (41.52%), Postives = 127/224 (56.70%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPL-LLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDA--GKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFPPLPK 221
            +  +I+DMDG+LLD+E IY  V   IV  YGK     L   ++GR +   AKI V+ L LP+T + +L  R + L+ + K+   +PGA ++  H    G+  AIATSS   +  AK T  + +F QFD I+ GDD +   GKP P IFL AA  I  +P  C VFEDAPAG EAA  AGM  V +P+S +  KL+++   +     A L DFD    G P  P+
Sbjct:    5 ISCLIYDMDGLLLDTEKIYTEVTQEIVGEYGKVFDLSLKQSIIGRPSSDAAKIIVDSLDLPITAQDYLDSRKETLIKKFKNTQPMPGAKEMTSHFFSHGIPQAIATSSSSPIYDAKYTKHKKWFSQFDKIVRGDDPELKLGKPAPDIFLLAAKRIGIEPEECLVFEDAPAGSEAAIAAGMSVVVVPHSEMGHKLFKNPSQIL----ASLKDFDPQFWGLPKFPE 224          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2D5TX92 (HAD family hydrolase n=4 Tax=root TaxID=1 RepID=A0A2D5TX92_9PROT)

HSP 1 Score: 159 bits (401), Expect = 4.900e-45
Identity = 88/192 (45.83%), Postives = 117/192 (60.94%), Query Frame = 0
Query:    4 VIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPL-LLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDD--VDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLY 192
            VI+DMDG+LLD+E  Y  V   IV RYGK     L   +LGR A   A+I V+ L LP+T  ++L +RN+ L ++      LPG  ++ RHL   G+  A+ATSS RD+  AK +    +F  F  I+ GDD  V  GKP P IFL AA  +  QP NC  FEDAP+G +AA  AGM  +A+P+S++D KLY
Sbjct:   10 VIYDMDGLLLDTERFYSMVTQQIVERYGKNFDWTLKSKILGRRAIESAQIIVDTLDLPITANEYLLQRNEILPLKFSECQPLPGVENLTRHLSSKGIPQAVATSSKRDMYEAKVSYHREWFSIFQTIVTGDDPEVSEGKPAPDIFLVAAKRLGGQPENCLAFEDAPSGTQAAYAAGMSVIAIPDSNMDKKLY 201          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2P6FHH9 (HAD family hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2P6FHH9_9DELT)

HSP 1 Score: 157 bits (396), Expect = 2.850e-44
Identity = 93/220 (42.27%), Postives = 122/220 (55.45%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIR-PILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDD--VDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFP 217
            +  +I+DMDG+LLD+E IY  V   IVS YGK     I   ++GR +   AKI VE L LP+TP+ +L  R   LL   +    LPGA  + +H  Q G+  AIATSS   +  AK    + +F QF+ II GDD  +  GKP P IFL AA  I      C VFEDAP+G EAA  AGM  V +P+ ++D K Y++   +     + L DFD    G P
Sbjct:    5 ISCIIYDMDGLLLDTEGIYTEVTQDIVSEYGKVFDWSIKKKIIGRRSIDAAKIIVESLDLPITPQDYLNSRKDVLLERFRDTKALPGAKALTKHFNQRGIPQAIATSSSSPIFEAKYEKHKKWFSQFEQIIRGDDPQLKEGKPAPDIFLLAAKRIGVAAEKCLVFEDAPSGTEAALAAGMSVVVVPDPNMDHKFYKNASQII----SSLKDFDPEYWGLP 220          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A8J7DA03 (HAD-IA family hydrolase n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7DA03_9CYAN)

HSP 1 Score: 155 bits (391), Expect = 1.560e-43
Identity = 88/220 (40.00%), Postives = 128/220 (58.18%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPL-LLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDD--VDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFTVPSACLLDFDISLLGFP 217
            +  +I+D DG+LL++EPIY +V  ++  RYGK     L    +GR A VCA+I   +L LPLTPE+++A R++ +     +A  +PGA+ + +H  + G+  AIATSS R     K    + +   FD I+ GDD  V   KP+P  FL AA+ +   P  C VFEDAPAG+EAA+ AGM  VA+P+  +D + YQ+ D +  + S     FD    G P
Sbjct:    4 ITHLIYDFDGLLLNTEPIYCQVNQTLAQRYGKDFTDQLHAQTMGRQALVCAEIVTTQLALPLTPEEYIAARDELIYDLFPTAEPMPGAIALTQHFHRQGIPQAIATSSARRSFGCKSARYQDWLALFDCIVVGDDPAVKQSKPEPDSFLVAASRLGAPPERCLVFEDAPAGIEAAKQAGMAVVAVPDKDMDWQSYQEADLILPMLSK----FDPQPWGLP 219          
BLAST of Ggra6116.t1 vs. uniprot
Match: A0A2D6YHQ7 (HAD family hydrolase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2D6YHQ7_9DELT)

HSP 1 Score: 154 bits (388), Expect = 4.160e-43
Identity = 83/199 (41.71%), Postives = 119/199 (59.80%), Query Frame = 0
Query:    1 MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIR-PILPLLLGRTADVCAKITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVKMAIATSSPRDLLIAKQTGKEAFFEQFDAIICGD--DVDAGKPDPQIFLKAAAAIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQD 196
            +K++++DMDG+LLD+E  Y  V   IVSR+G      I   +LGR A   A+  V  L+LP+ PE +LAER   L         +PGA+++ R +K+ GV  A+ATSS ++    K    + +F +FDAI  GD  D+  GKP P IFL AA  +   PS C VFEDAPAG++AA+ AGM  V +P+  +D ++ +  D
Sbjct:    7 IKAILYDMDGLLLDTENFYTDVTQEIVSRFGGNFDWSIKSQMLGRPALESARTLVRLLELPIQPEDYLAERKALLNQRFPETEAMPGAIELTRRMKKAGVPQAVATSSTKEAYTLKTKKHQKWFREFDAIFTGDHPDIQNGKPAPDIFLVAAKKLRVLPSECLVFEDAPAGVQAAKAAGMSVVVVPDPQLDQEMVKSAD 205          
The following BLAST results are available for this feature:
BLAST of Ggra6116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILR11.670e-11273.76Pseudouridine-5'-phosphatase n=1 Tax=Gracilariopsi... [more]
R7QR891.870e-10170.32HAD-like hydrolase family protein n=1 Tax=Chondrus... [more]
A0A7S2ZSY82.340e-5344.95Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2D4RS961.440e-4641.82HAD family hydrolase n=3 Tax=Proteobacteria TaxID=... [more]
A0A661CSF84.460e-4644.72HAD family hydrolase n=1 Tax=Gammaproteobacteria b... [more]
A0A2E5C1N34.760e-4541.52HAD family hydrolase n=1 Tax=Deltaproteobacteria b... [more]
A0A2D5TX924.900e-4545.83HAD family hydrolase n=4 Tax=root TaxID=1 RepID=A0... [more]
A0A2P6FHH92.850e-4442.27HAD family hydrolase n=3 Tax=Proteobacteria TaxID=... [more]
A0A8J7DA031.560e-4340.00HAD-IA family hydrolase n=1 Tax=Romeria aff. graci... [more]
A0A2D6YHQ74.160e-4341.71HAD family hydrolase n=2 Tax=Deltaproteobacteria T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006439HAD hydrolase, subfamily IAPRINTSPR00413HADHALOGNASEcoord: 1..12
score: 34.03
coord: 171..184
score: 27.38
coord: 94..107
score: 35.12
coord: 126..142
score: 42.16
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 74..181
e-value: 1.7E-18
score: 65.3
IPR023198Phosphoglycolate phosphatase-like, domain 2GENE3D1.10.150.240Putative phosphatase; domain 2coord: 15..81
e-value: 2.6E-57
score: 195.8
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 4..181
e-value: 9.5E-22
score: 77.9
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 4..192
e-value: 2.6E-57
score: 195.8
NoneNo IPR availableSFLDSFLDS00003Haloacid_Dehalogenasecoord: 1..199
e-value: 1.7E-38
score: 127.3
NoneNo IPR availablePIRSRPIRSR004682-4PIRSR004682-4coord: 1..12
e-value: 1200.0
score: -3.4
NoneNo IPR availableSFLDSFLDG01135C1.5.6:_HAD,_Beta-PGM,_Phosphcoord: 1..199
e-value: 1.7E-38
score: 127.3
NoneNo IPR availablePANTHERPTHR189012-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2coord: 2..218
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 1..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:591432..592115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6116.t1Ggra6116.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 591432..592115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6116.t1 ID=Ggra6116.t1|Name=Ggra6116.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=228bp
MKSVIWDMDGVLLDSEPIYFRVEHSIVSRYGKQIRPILPLLLGRTADVCA
KITVEKLQLPLTPEQFLAERNKQLLIEMKSAAILPGAVDIVRHLKQCGVK
MAIATSSPRDLLIAKQTGKEAFFEQFDAIICGDDVDAGKPDPQIFLKAAA
AIDEQPSNCFVFEDAPAGLEAARLAGMKTVALPNSHVDIKLYQDQDPLFT
VPSACLLDFDISLLGFPPLPKKPLSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR023198PGP-like_dom2
IPR041492HAD_2
IPR023214HAD_sf
IPR036412HAD-like_sf