Ggra6112.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6112.t1
Unique NameGgra6112.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length556
Homology
BLAST of Ggra6112.t1 vs. uniprot
Match: A0A2V3IIZ9 (DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIZ9_9FLOR)

HSP 1 Score: 595 bits (1534), Expect = 5.280e-208
Identity = 302/481 (62.79%), Postives = 375/481 (77.96%), Query Frame = 0
Query:   76 VVADSAILSKYSHLCSLPVRPTRWLSDSLRDLRLKSPELYPGATPSSHTCPSIQSLPTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKTAPA-TVVRNLLPLFEDREKRSETKSSSLVVSPPIRSATPSRWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRSFPQVIKRMKMEGVLTDDLIDGPGKYFGVYKFPGRRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQKVCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPSARSIS 555
            VVAD+A+LSKY+HLC +PVRP RWL++S+RD RLKSP+LY   TPS+ TC      P  SSKR +  ++F+ +V+Y   S+  KRR + D S +  S  +  + ++V+NL P+ +     S  + S  V +    SA P RWACEIRP ++ +D+PMN  ICELLG+VQEAY+LKKDHFR+LGYQRAIAKIR+L +E+LTI DV SLG E ++G+R++RKI EIITT RLLQAE VL+N  NVAVKTLC VWG+GPVKAMGLVA GITSIEQLR A  +N++LLD+NQK GL+ YEDLLHRIPR+ VAELE YVR+I K++DSS+DI VAGSYLRGK SCGDVDI+V GSS+ L ++FP++ KRMK +GVLTDDL+ G GKYFG++KFPGRRHGRIDLFAVPHEQYPYALLTYTGSAVFN              SH+G+QKVCR  +SR++V PPI+V++E+EIF LLDI YVPPSARSIS
Sbjct:    2 VVADTAMLSKYAHLCEVPVRPARWLTESVRDHRLKSPDLYRFCTPSAETC---LRAPPSSSKRRYNYSEFRVEVNYDLKSQSAKRRKVVDYSLSSGSTASDQSDSIVKNLFPVLKISRPPSTVRHSEAVETVSSPSARPRRWACEIRPTMSDTDFPMNAKICELLGVVQEAYALKKDHFRTLGYQRAIAKIRSLPHEVLTIDDVRSLGGETSIGSRIERKITEIITTGRLLQAETVLNNSENVAVKTLCDVWGIGPVKAMGLVAEGITSIEQLRAAVRKNDSLLDLNQKIGLKHYEDLLHRIPREQVAELEYYVRRIVKRVDSSIDIKVAGSYLRGKKSCGDVDILVYGSSQKLKKAFPEITKRMKKDGVLTDDLVHGAGKYFGIFKFPGRRHGRIDLFAVPHEQYPYALLTYTGSAVFN--------------SHQGLQKVCRTNYSRTRVEPPIRVRDEKEIFLLLDIPYVPPSARSIS 465          
BLAST of Ggra6112.t1 vs. uniprot
Match: R7QJC4 (DNA polymerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJC4_CHOCR)

HSP 1 Score: 441 bits (1134), Expect = 4.970e-145
Identity = 242/498 (48.59%), Postives = 320/498 (64.26%), Query Frame = 0
Query:   15 FANHHVFLVPSLLFTKRVAQRLLERLREHGGQGQVLQPAEHGFRSVQSLSDAPSSPTVQQFVVADSAILSKYSHLCSLPVRPTRWLSDSLRDLRLKSPELYPGATPSSHTCPSIQS----------LPTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKTAPATVVRNLL--PLFEDREKRSETKSSSLVVSPPIRSATPSRWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRSFPQVIKRMKMEGVLTDDLIDGPGKYFGVYKFPGRRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAK 500
            F ++++  VPS+LF+   A  LL+ +RE+GG+G+V   +E GFR   +L    +SP     V AD  ++ KYS    L  RP +WL DSLRD R+K P LY       +  P+ +           LP+ + +   T A    +V  + + +P K  N S  S  P+ ++ A A   R     PL   R +R      S +  P   SA P  WACEIR   +  D+PMN  ICELLG+VQE+  +KKD FR+ GYQRAIA+IR L  +I T+ DV  L   + +GT+++RKI+EI+ T RLLQAE VL N    AV+ LC VWG+GPVKA+ L+A+GI S+ QLR+A   ++ +LD NQK GLR YEDLL RIPR+HVAELE +VR + K +D SLDITVAGSYLRGK  CGDVDI++ GSSE L   F +V+K M+ +GVLTDDL  G GKYFG+++FPGR H R+DLFAVPHE+YP+ALLTYTGSA+FNR + +K
Sbjct:  122 FHDYYIAFVPSILFSHSRAALLLDLVRENGGEGKVFAASEMGFREASTLIREKTSPFCNAIVCADVNLICKYSTSYQLDARPPKWLRDSLRDCRIKHPSLYVKKYEEKNCSPAKRKPHEANISCIHLPSPTKRPRSTVA----KVLTAEMVKPAKDHNPSFRS--PREKEGAEADEFRGQASSPLSSRRGERD-----SKLEQP---SAKPLSWACEIRTSFSGGDFPMNEKICELLGVVQESCLMKKDQFRATGYQRAIARIRALRQDITTVDDVAVLTSGKGIGTKLERKIIEIVKTGRLLQAENVLENAEGTAVRQLCNVWGIGPVKALHLIAQGIKSVTQLRDAVRHDSQILDRNQKIGLRHYEDLLLRIPRRHVAELEKFVRMVVKSVDQSLDITVAGSYLRGKKDCGDVDILICGSSEQLRFGFVKVVKEMRKKGVLTDDLTIGQGKYFGIFRFPGRPHARVDLFAVPHEEYPFALLTYTGSAIFNRYVNSK 605          
BLAST of Ggra6112.t1 vs. uniprot
Match: A0A815N5L4 (DNA polymerase n=10 Tax=Adineta steineri TaxID=433720 RepID=A0A815N5L4_9BILA)

HSP 1 Score: 197 bits (501), Expect = 1.330e-52
Identity = 154/516 (29.84%), Postives = 232/516 (44.96%), Query Frame = 0
Query:   68 SSPTVQQFVVADSAI-LSKYSHLCSLP-----------VRPTRWLSDSLRDLRLKSPELYPGATPSSHTCPSIQSL---PTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKTAPATVVRNLLPLFEDREKRSETKSSSLVVSPPIRSATPS-RWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRSFP-QVIKRMKMEGVLTDDLI--------DGPG---KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLS-HKGMQKVCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPSAR 552
            +SP   +F++ D    +SK   L  L            +  T+WLSDSL++                H  P  +     P L  K+       QP V      R   +R +SDD+     Q      V +      ED++       +  V +P      P   W C +       +  +N  I + L  + + Y    D +R+  YQ+AI  IR  ++ I +  ++  L     +G  + +KI EII T    + E   S+     +     VWG GP  A     +G  +++ LR  ++     L  NQ+ GL+ Y++ L R+PR  V E+E  V++ A  +   L I   GSY RGKP+CGDVDI++  +           +I  +K  G LTDDL+        +  G   KY+GV   PG  R+H R+D+  +PH++Y  ALL +TGSA+FNRSMRA A  Y   LS H+    V R  +S+   G P+    EE IF+ L++ Y PP  R
Sbjct:   56 TSPENARFIIVDEQFDVSKVYSLLKLDPTDYIEKPPPIIIQTKWLSDSLKE---------------KHLVPLTKDYIIRPLLIRKKAMPSFSQQPAVEEKNFIRNKPKRRLSDDAP----QGGCATQVKQRRYSSDEDQDHDIMDDYNDTVKNPYKNGELPKGNWMCSMSSQTAKKNTEINKDIIDKLQAMGDLYGKTNDKWRAYSYQKAITTIRRCTHRINSYEEIIKLP---GIGESLAKKIWEIIDTGSFEKLEDFQSSEYMNVITLFGNVWGCGPNIAKQWYDQGFRTLDDLRTKAK-----LSDNQQVGLKYYDEFLERMPRNEVCEIEAVVKEHALALVPDLIIQTCGSYRRGKPTCGDVDILITHTDGISHEGLLIPLIDSLKKSGFLTDDLVLSASDKYEEDSGSHVKYYGVCLLPGENRKHRRLDIIIIPHDEYACALLYFTGSALFNRSMRALAHRYNMYLSQHRLNTGVIRKNNSKINTGTPLYTPTEESIFKYLNLPYRPPEER 544          
BLAST of Ggra6112.t1 vs. uniprot
Match: DNA polymerase lambda isoform X15 n=4 Tax=Homo sapiens TaxID=9606 RepID=UPI0003EAEDAE (DNA polymerase lambda isoform X15 n=4 Tax=Homo sapiens TaxID=9606 RepID=UPI0003EAEDAE)

HSP 1 Score: 193 bits (491), Expect = 1.720e-52
Identity = 131/408 (32.11%), Postives = 207/408 (50.74%), Query Frame = 0
Query:  156 RPTKRRNISDDSANPKSQKTAPATVVRNLLPLFEDREKRSETKSSSLVVSPPIRSATPSRWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRS-FPQVIKRMKMEGVLTDDLIDGPG-----KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQK-VCRNKHSRSKVGPP--IQVQNEEEIFRLLDIRYVPPSAR 552
            R  K++ ISDD A+   +    A  +  L+          + + S          A   +W C       A+++  N+ I E L ++ +AYS++ D +R+LGY +AI  +++    + +  +  S+     +G RM  KI+EI+ +  L + + +  +     ++    +WG G   A     +G  S+E +R+ +      L   Q  GL+ Y D L R+PR+   E+E  V+K A+  +S L     GSY RGK +CGDVD+++        R  F +++  ++ EG LTDDL+         KY GV + PG  RRH R+D+  VP+ ++  ALL +TGSA FNRSMRA A+T G SLS   +   V RN H   KVGP   +    E+++FRLL + Y  P+ R
Sbjct:   17 REKKQKPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPA-------PAVLDKWVCAQPSSQKATNH--NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIP---GIGKRMAEKIIEILESGHLRKLDHISESVP--VLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQAS-----LTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHG-CKVGPGRVLPTPTEKDVFRLLGLPYREPAER 404          
BLAST of Ggra6112.t1 vs. uniprot
Match: A0A814PXW8 (DNA polymerase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814PXW8_ADIRI)

HSP 1 Score: 194 bits (493), Expect = 1.820e-51
Identity = 162/523 (30.98%), Postives = 243/523 (46.46%), Query Frame = 0
Query:   60 VQSLSDAPSSPTVQQFVVADSA--------ILSKYSHLCSLP-VRPTRWLSDSLRDLRL----KSPELYPGATPSSHTCPSIQSLPTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKTAPATVVRNLLPLFEDREKRSETKSSSLVVSPPIRSATPS-RWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVG----SSETLSRSFPQVIKRMKMEGVLTDDLI------DGPG---KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLS-HKGMQKVCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPSAR 552
            +QSL+ + ++    +F++AD          +L   SH  + P V  T+WLSDSL++ RL    K   + P      HT PS     T   K+                 R   +R +S+D           AT ++      +D +       +  V +P      P   W C +       +  +N  I E L  + E Y+   D +R+  YQ+AI  IR  ++ I +  ++  L     +G  + +KI EII T    + E   S+     +     VWG GP  A     +G  +++ LR  ++     L  NQ+ GL+ Y++ L RIPR+ V E+E  V++ A  +   L I   GSY RGK +CGDVDI++      S + L       +K+    G LTDDLI      D  G   KYFGV   PG  R+H R+D+  +PH++Y  ALL +TGSA+FNRSMR+ A  Y   LS H+    V R  +S+  +G P+    EE IF+ L++ Y PP  R
Sbjct:   58 LQSLATSENA----RFIIADDQFDVPKIFQMLKIESHEEAPPTVIRTKWLSDSLKEKRLIPLTKDYIIRPPLI-RKHTVPSFTQESTTEEKKFV---------------RDKPKRKLSEDEPQGGC-----ATQIKQRRFSSDDDDYDVNDDYNDTVKNPYKNGELPKGNWMCSMSSQTAKKNTEVNRDIIEKLQAMGELYAKTNDKWRAYSYQKAITTIRRCTHRIDSYEEIIKLP---GIGESLAKKIWEIIDTGSFEKLEDFQSSEYMKVLDLFGNVWGCGPNIAKQWYDQGFRTLDDLRTKAK-----LSQNQQVGLKYYDEFLERIPREEVTEIEAMVKQHALALVPGLTIQTCGSYRRGKATCGDVDILITHVDGISHDGLLIPLTDSLKKC---GFLTDDLILSDKYDDDSGSHVKYFGVCLLPGENRKHRRLDIIVIPHDEYACALLYFTGSALFNRSMRSLAHKYNMYLSQHRLNTGVIRKNNSKINMGTPLYTPTEESIFKYLNLPYRPPEER 544          
BLAST of Ggra6112.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449E47 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449E47)

HSP 1 Score: 193 bits (490), Expect = 2.140e-51
Identity = 121/370 (32.70%), Postives = 199/370 (53.78%), Query Frame = 0
Query:  191 REKRSETKSSSLVVSPPIRSATPSRWACEIRP-MLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRSFP-QVIKRMKMEGVLTDDLI---DGPGKYFGVYKF-PGRRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQKVCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPSARSI 554
            + K + TKS+   +  P +    S + C+     +  +++  +VM  E L  + EA   + DH+R   Y++A++ +R L + +    D   +   R +G ++  KI EI+ T  LL+ E  L++  N++ +TL  + G GP      +A+GI S+++L+ A+ ++ + L   Q+ GL+ Y+D   RIPR  V  +   ++ +AK+ID  + + V GS+ R KP CGD+DI+       + + F  Q++KR++   +LTD L        KY GV +  P  +H RID   +P E++PYALL +TGS  FNRSMR  AR  G+SLS   + +      +  K G PI+   E +IF LL + Y  P  R +
Sbjct:  144 KSKTTPTKSNVSSLVSPTKYLKASNFVCQNNGGRVNHNEHLTSVM--EKLQSLSEA---EGDHWRQYAYKKAVSILRALPFRV---NDAKQISHIRGIGAKILDKIREILHTGTLLKVERALADTTNISRETLSKIHGAGPETVRKWIAKGIDSLDKLQQAASKDQSFLTWQQRIGLKYYDDFQLRIPRDEVQAIADNIQAVAKEIDKDIIMQVCGSFRRSKPDCGDIDILFTQVKGEILKGFLWQLVKRLESNSLLTDHLTHVKSDSDKYMGVCRHGPNGKHRRIDFQTIPREEWPYALLYFTGSDHFNRSMRLWARKNGFSLSSSHLVRRWGTGDNEVK-GDPIEAATERDIFLLLGLEYKEPHEREV 504          
BLAST of Ggra6112.t1 vs. uniprot
Match: A0A1U7Q2N7 (DNA polymerase n=6 Tax=Cricetinae TaxID=10026 RepID=A0A1U7Q2N7_MESAU)

HSP 1 Score: 193 bits (490), Expect = 7.220e-51
Identity = 158/515 (30.68%), Postives = 247/515 (47.96%), Query Frame = 0
Query:   69 SPTVQQFVVADSAILSKYSHLCSLPVRP-------TRWLSDSLRDLRLKSPELYPGATPSSHTCPSIQSLPTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKT--APATVVRNLLPLFEDREKRSETKSSSLVV----SPPIRSATPS-------RWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRS-FPQVIKRMKMEGVLTDDLIDGPG-----KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLS-HKGMQKVCRNKHSRSKVGP--PIQVQNEEEIFRLLDIRYVPPSAR 552
            +P V   VV ++    +   L  LP  P       + WLS  L++ RL     +  + P S      Q  P+ +          Q  VS + LS P      +  S  PK++K   +PA +  +     E+  + S     +LV     +PP     P        +W C       A++Y  N  I E L ++ +AYS++ D +R+LGY +AI  +++    I +  +  S+     +G RM  KIVEI+ +  L + + +  +     ++    +WG G   A     +G  ++E +RN        L   Q  GL+ Y+D L R+PR+  A++E  VRK A+  +  L     GSY RGK +CGDVD+++        +  F +++  ++ +G LTDDL+         KY GV + PG  +RH R+D+  VP+ ++  ALL +TGSA FNRSMRA A+T G SLS H   + V RN H   KVGP   +    E+++FRLL + Y  P+ R
Sbjct:   76 APGVTHIVVDENMDCERALRLLRLPQLPPSAQLVKSAWLSSCLQEGRLMDTAGFRLSIPKSSL---DQPQPSKAD------GGTQEAVSRTTLSHPPPHPRAA--SPPPKAEKAPRSPAQLGSDDETSDEEGPQVSSADLEALVSGHYPTPPEEDGGPDPAPEALEKWVCAQPSSQKATNY--NQHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPISSYQEACSIP---GIGKRMAEKIVEILESGHLRKLDYISDSVP--VLELFSNIWGAGTKTAQMWYHQGFRNLEDIRNLGS-----LTTQQAIGLKHYDDFLERMPREEAADIEQTVRKSAQAFNPGLLCVACGSYRRGKTTCGDVDVLITHPDGRSHQGIFSRLLDSLRQQGFLTDDLVSHEENGQQQKYLGVCRLPGPGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSEAVVRNSHG-VKVGPGRALPTPTEKDVFRLLGLPYREPAER 566          
BLAST of Ggra6112.t1 vs. uniprot
Match: E5FGJ2 (DNA polymerase (Fragment) n=4 Tax=Cercopithecidae TaxID=9527 RepID=E5FGJ2_TRAFR)

HSP 1 Score: 192 bits (488), Expect = 1.530e-50
Identity = 154/518 (29.73%), Postives = 246/518 (47.49%), Query Frame = 0
Query:   70 PTVQQFVVADSAILSKYSHLCSLPVRP-------TRWLSDSLRDLRLKSPELYPGATPSSHTCPSIQSLPTLSSKRHFTPADFQPQVSYSALSRPTKRRNISDDSANPKSQKTAPATVVRNLLPLFEDREKRSE-TKSSSLVVSPPIRSATPS----------------RWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRS-FPQVIKRMKMEGVLTDDLIDGPG-----KYFGVYKFPGR--RHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQK-VCRNKHSRSKVGPP--IQVQNEEEIFRLLDIRYVPPSAR 552
            P V   VV +     +   L  LP  P       + WLS  L++ RL     +    P+ +     QS P+ + +    P      +  +ALS P+  R +      P+  K AP T  +   P+ +D     E T+ S+  +   I    P+                +W C       A+++  N+ I E L ++ +AYS++ D +R+LGY +AI  +++    + +  +  S+     +G RM  KI+EI+ +  L + + +  +     ++    +WG G   A     +G  S+E +R+ +      L   Q  GL+ Y D L R+PR+   E+E  V+K A+  +S L     GSY RGK +CGDVD+++        R  F +++  ++ +G LTDDL+         KY GV + PG   RH R+D+  VP+ ++  ALL +TGSA FNRSMRA A+T G SLS   +   V RN H   KVGP   +    E+++FRLL + Y  P+ R
Sbjct:   78 PGVTHIVVDEGMDYERALRLLRLPRLPPGAQLVKSAWLSLCLQERRLVDVAGFSVFIPNRYL---DQSQPSKAEQDASLPPGTHEALLQTALSPPSPTRPVPP----PQKTKEAPNTQAQ---PISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPVVLDKWVCAQPSSQKATNH--NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIP---GIGKRMAEKIIEILESGHLRKLDHISESVP--VLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQAS-----LTTQQAIGLKHYNDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGWRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHG-CKVGPGQVLPTPTEKDVFRLLGLPYREPAER 572          
BLAST of Ggra6112.t1 vs. uniprot
Match: DPOLL (DNA polymerase lambda n=61 Tax=root TaxID=1 RepID=DPOLL_HUMAN)

HSP 1 Score: 192 bits (488), Expect = 1.560e-50
Identity = 166/559 (29.70%), Postives = 254/559 (45.44%), Query Frame = 0
Query:   27 LFTKRVAQRLLERLREHGGQGQVLQPAEHGFRSVQSLSDAPSSPTVQQFVVADSAILSKYSHLCSLPVRP-------TRWLSDSLRDLRLKSPELYPGATPS---SHTCPSIQ----SLPTLSSKRHFTPADFQPQVSYSALSRPTKRRN--------ISDDSANPKSQKTAPATVVRNLLPLFEDREKRSETKSSSLVVSPPIRSATPSRWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRS-FPQVIKRMKMEGVLTDDLIDGPG-----KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQK-VCRNKHSRSKVGPP--IQVQNEEEIFRLLDIRYVPPSAR 552
            LF K++ Q        HGGQ   L PA+               P V   VV +     +   L  LP  P       + WLS  L++ RL     +    PS    H  PS      S+P  + +     A   P      +S P K +         ISDD A+   +    A  +  L+          + + S          A   +W C       A+++  N+ I E L ++ +AYS++ D +R+LGY +AI  +++    + +  +  S+     +G RM  KI+EI+ +  L + + +  +     ++    +WG G   A     +G  S+E +R+ +      L   Q  GL+ Y D L R+PR+   E+E  V+K A+  +S L     GSY RGK +CGDVD+++        R  F +++  ++ EG LTDDL+         KY GV + PG  RRH R+D+  VP+ ++  ALL +TGSA FNRSMRA A+T G SLS   +   V RN H   KVGP   +    E+++FRLL + Y  P+ R
Sbjct:   60 LFEKQIVQ--------HGGQ---LCPAQ--------------GPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPA-------PAVLDKWVCAQPSSQKATNH--NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIP---GIGKRMAEKIIEILESGHLRKLDHISESVP--VLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQAS-----LTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHG-CKVGPGRVLPTPTEKDVFRLLGLPYREPAER 573          
BLAST of Ggra6112.t1 vs. uniprot
Match: A0A1S3FAT0 (DNA polymerase n=2 Tax=Dipodomys TaxID=10016 RepID=A0A1S3FAT0_DIPOR)

HSP 1 Score: 192 bits (487), Expect = 2.120e-50
Identity = 118/347 (34.01%), Postives = 185/347 (53.31%), Query Frame = 0
Query:  215 RWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKKDHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIITTRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNASEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLDITVAGSYLRGKPSCGDVDIMVVGSSETLSRS-FPQVIKRMKMEGVLTDDLIDGPG-----KYFGVYKFPG--RRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAKARTYGYSLSHKGMQK-VCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPSAR 552
            +W C       A+++  N+ I E L ++ +AY+++ D +R+LGY +AI  +++    + +  +  S+     +G RM  KI+EI+ +  L + + +  +     ++    +WG G   A     +G  S+E +R+ +      L   Q  GL+ Y+D L R+PR+  AE+E  VR  A+  +S L     GSY RGK +CGDVD+++        R  F  ++ R++ +G LTDDL+         KY GV + PG  RRH R+D+  VPH ++  ALL +TGSA FNRSMRA A+T G SLS   +   V RN       G  +    E+E+FRLL + Y  P+ R
Sbjct:  238 KWVCAQPSSQKATNH--NLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSFQEACSIP---GIGKRMAEKIMEILESGHLRKLDHISESVP--VLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSLAS-----LTAQQAIGLKHYDDFLERMPREEAAEIEQMVRLSAQAFNSGLLCVACGSYRRGKGTCGDVDVLITHPDGRSHRGIFSPLLDRLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPHSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTQGSKVCGQVLPTPTEKEVFRLLGLPYREPAER 572          
The following BLAST results are available for this feature:
BLAST of Ggra6112.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIZ95.280e-20862.79DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID... [more]
R7QJC44.970e-14548.59DNA polymerase n=1 Tax=Chondrus crispus TaxID=2769... [more]
A0A815N5L41.330e-5229.84DNA polymerase n=10 Tax=Adineta steineri TaxID=433... [more]
DNA polymerase lambda isoform X15 n=4 Tax=Homo sapiens TaxID=9606 RepID=UPI0003EAEDAE1.720e-5232.11DNA polymerase lambda isoform X15 n=4 Tax=Homo sap... [more]
A0A814PXW81.820e-5130.98DNA polymerase n=2 Tax=Adineta ricciae TaxID=24924... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449E472.140e-5132.70hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1U7Q2N77.220e-5130.68DNA polymerase n=6 Tax=Cricetinae TaxID=10026 RepI... [more]
E5FGJ21.530e-5029.73DNA polymerase (Fragment) n=4 Tax=Cercopithecidae ... [more]
DPOLL1.560e-5029.70DNA polymerase lambda n=61 Tax=root TaxID=1 RepID=... [more]
A0A1S3FAT02.120e-5034.01DNA polymerase n=2 Tax=Dipodomys TaxID=10016 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 485..498
score: 46.7
coord: 327..344
score: 30.77
coord: 402..416
score: 44.62
coord: 469..478
score: 43.85
coord: 534..552
score: 43.72
IPR022312DNA polymerase family XPANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 54..552
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 363..377
score: 37.33
coord: 286..303
score: 33.33
coord: 535..552
score: 36.67
coord: 483..490
score: 55.0
coord: 403..422
score: 45.0
IPR002054DNA-directed DNA polymerase XSMARTSM00483polxneu3coord: 230..553
e-value: 1.4E-42
score: 157.4
IPR002054DNA-directed DNA polymerase XCDDcd00141NT_POLXccoord: 235..552
e-value: 8.0985E-82
score: 256.353
NoneNo IPR availableGENE3D1.10.150.20coord: 314..374
e-value: 4.1E-14
score: 54.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..176
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 314..374
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 375..485
e-value: 7.2E-29
score: 102.3
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 375..553
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 320..372
e-value: 1.1E-12
score: 47.5
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 213..312
e-value: 9.7E-14
score: 53.5
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 214..310
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 375..476
e-value: 1.5E-21
score: 76.7
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10DNA polymerase, thumb domaincoord: 486..553
e-value: 9.5E-18
score: 65.9
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 483..552
e-value: 5.8E-15
score: 55.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:581031..582881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6112.t1Ggra6112.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 581031..582881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6112.t1 ID=Ggra6112.t1|Name=Ggra6112.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=556bp
MVSASPLSPSKPSTFANHHVFLVPSLLFTKRVAQRLLERLREHGGQGQVL
QPAEHGFRSVQSLSDAPSSPTVQQFVVADSAILSKYSHLCSLPVRPTRWL
SDSLRDLRLKSPELYPGATPSSHTCPSIQSLPTLSSKRHFTPADFQPQVS
YSALSRPTKRRNISDDSANPKSQKTAPATVVRNLLPLFEDREKRSETKSS
SLVVSPPIRSATPSRWACEIRPMLTASDYPMNVMICELLGIVQEAYSLKK
DHFRSLGYQRAIAKIRTLSYEILTIGDVHSLGDERAVGTRMQRKIVEIIT
TRRLLQAEAVLSNPRNVAVKTLCGVWGVGPVKAMGLVARGITSIEQLRNA
SEQNNNLLDVNQKTGLRRYEDLLHRIPRKHVAELEGYVRKIAKQIDSSLD
ITVAGSYLRGKPSCGDVDIMVVGSSETLSRSFPQVIKRMKMEGVLTDDLI
DGPGKYFGVYKFPGRRHGRIDLFAVPHEQYPYALLTYTGSAVFNRSMRAK
ARTYGYSLSHKGMQKVCRNKHSRSKVGPPIQVQNEEEIFRLLDIRYVPPS
ARSIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022312DNA_pol_X
IPR002008DNA_pol_X_beta-like
IPR002054DNA-dir_DNA_pol_X
IPR043519NT_sf
IPR018944DNA_pol_lambd_fingers_domain
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR028207DNA_pol_B_palm_palm
IPR037160DNA_Pol_thumb_sf
IPR029398PolB_thumb