Ggra6109.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6109.t1
Unique NameGgra6109.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length519
Homology
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A2V3IJ00 (CRP-like cAMP-activated global transcriptional regulator n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ00_9FLOR)

HSP 1 Score: 463 bits (1192), Expect = 2.180e-156
Identity = 236/324 (72.84%), Postives = 277/324 (85.49%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAPNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRRMSRAMESAASGGGEAEEGVKVA 324
            +SR  FRA L+    LSTQ++ESLSE+V  ++  FRTPL+SQR+ ++NLSAV VA+  ESYYRSALNA+LNRRLSG+SAPLFPNMHVQVPARVLYIAGFKSLRA LDRDID D+W+TH ARVAVR  KTIAPG++MTPISSILEASNVGH N EPLL RSLRGSVPRL REVVFGVGLNQLSD+MEERYR  APNA+VANM GSL+AGVVAGYLSHVPHNLST+KLL P +SYS+LF LFV KSVP++++PR + AS++P AR  LAC+FPRGVLIRTVQICGSFA+LNG+IL++ETDSRRR+   +++     G AE+  KVA
Sbjct:  161 ISRKEFRAHLQADPTLSTQIIESLSERVLEDSCQFRTPLMSQRTTDINLSAVTVAAATESYYRSALNAILNRRLSGVSAPLFPNMHVQVPARVLYIAGFKSLRAFLDRDIDPDKWNTHPARVAVRFCKTIAPGIIMTPISSILEASNVGHANPEPLLLRSLRGSVPRLGREVVFGVGLNQLSDFMEERYRTFAPNAIVANMAGSLSAGVVAGYLSHVPHNLSTYKLLNPHKSYSELFQLFVDKSVPDRIIPRGVSASLLPYARTVLACLFPRGVLIRTVQICGSFALLNGIILMIETDSRRRLGGTLDAVYKEHG-AEQAAKVA 483          
BLAST of Ggra6109.t1 vs. uniprot
Match: R7QJC9 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJC9_CHOCR)

HSP 1 Score: 392 bits (1008), Expect = 1.160e-129
Identity = 194/302 (64.24%), Postives = 241/302 (79.80%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAPNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRR 302
            MS   FR QLR    L+TQ++E LSE +      FRTPLL+QR+N++N +AV VA+ VESYYRSALN++LN RLSG+S+PLFPNMHVQVPARV YIAGFK LRA+ DR+ID D+W TH  RVAVRV   +APG++MTPISS+LEA NVGH N EPL+ R+ RG +PR  REV+FG+GLNQLSD+ EERYR +A NA+VA   GSL+AGVVAGY SHVPHNLST+KL+ P + Y +LF +FV KSVPE+++P ALP SM+P  +  LAC+ PRGV +RTVQICGSFA+LNG+I ++E D+RRR
Sbjct:   96 MSTHTFRQQLRERPHLATQVIEGLSEDLRIKGSSFRTPLLAQRANDVNFAAVCVAATVESYYRSALNSVLNHRLSGLSSPLFPNMHVQVPARVAYIAGFKGLRALFDREIDPDKWDTHPTRVAVRVTNMVAPGIVMTPISSLLEACNVGHANPEPLMYRATRGLLPRGGREVIFGIGLNQLSDFFEERYRNVA-NAVVAGTAGSLSAGVVAGYFSHVPHNLSTYKLMNPNKPYPELFRMFVDKSVPEKIIPNALPKSMLPYVKATLACLIPRGVGVRTVQICGSFALLNGIIQMIEKDNRRR 396          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A7S3L866 (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L866_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.580e-98
Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAP-NALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPE--QLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRRMSRA 306
            + R  F   L     ++ Q+ E L E+V  +++ +RTPLL Q+  E+N+ AVA+A+ +ESYYRSALNA+LN RL+G+ + LFPNMH+QVP R+ YI GFK LR + D+ +DA+ +  +A   AV +   +APG+LMTPISS+LEASN GH+N E +  R LRG VPR  RE++FGVGLNQLSDY EER  P+ P N ++AN  GSL AGVV+GYLSHVPHNLST+KL++P +SY QLF +FV KS P        A PA    A R   + +FPRGV+IRTVQI GSF ILNG I  ++     ++ RA
Sbjct:  123 LQRDKFLKLLSNKPEITIQIAEGLCEEVRRSSKKYRTPLLQQKQQEVNVPAVAIAAGIESYYRSALNAMLNARLTGVKSDLFPNMHIQVPTRIAYIVGFKGLRTIFDKHVDAESFGDNAT--AVSLATAVAPGILMTPISSVLEASNAGHLNPESMTTRWLRGVVPRAGREIIFGVGLNQLSDYFEERMTPMFPQNPMMANAAGSLAAGVVSGYLSHVPHNLSTYKLMEPNKSYGQLFKMFVDKSCPPIVDASTSAWPAFARTATRSIFSVMFPRGVMIRTVQIVGSFMILNGTINYLQLLEHNKIQRA 429          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A7S0ZKF5 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKF5_9RHOD)

HSP 1 Score: 307 bits (786), Expect = 8.530e-97
Identity = 166/314 (52.87%), Postives = 223/314 (71.02%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRP-LAPNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAAR----VALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRRMSRAMES 309
            + R A    +R+S  LS+ +V  LS  +  ++R   TPLL Q S E N+ AV++A+ +ESYYRSALNA+LN+RL+GI A LFPNMHVQVP RV+YI GFK LR++++R++  D + T+ +  AVR+   +APG+LMTP+SS+LEASN GH N EPL RR +RG +PR ARE++FG+GLNQLSD+ EER  P L+ N +++N  GSL AGVV+GYLSHVPHNLSTFKL++P ++Y  LF +FV KSVP  +   +  +S  P AR       A  FPRGV+IRTVQI GSF ILNG I ++    R ++ + + S
Sbjct:   71 LGRDALLEHMRKSPTLSSSMVSGLSYHLRHSSRKMATPLLEQHSKETNVPAVSIAAGIESYYRSALNAMLNQRLTGIRADLFPNMHVQVPIRVMYINGFKGLRSIIERNVQPDNY-TYPS--AVRLVAAVAPGILMTPLSSVLEASNAGHKNPEPLSRRWIRGILPRGAREIIFGIGLNQLSDFFEERMSPMLSNNQVLSNAAGSLAAGVVSGYLSHVPHNLSTFKLMEPHRNYIDLFKMFVDKSVPASV--DSAVSSWSPLARNVTRAVFATFFPRGVVIRTVQIVGSFIILNGTINVLVRQERLKLEKVLNS 379          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A1Z5JV40 (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV40_FISSO)

HSP 1 Score: 303 bits (776), Expect = 1.300e-94
Identity = 156/308 (50.65%), Postives = 210/308 (68.18%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAPN-ALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRRMSRAM 307
            M R  F   LR    LS Q+ E L E++   ++ + TP+L Q   E+NLSAV++A+ +ESYYRSALNA +N+ L+G+ A  FPNMH+QVP R+ YI GFK LR+  D+++  + ++ +    AVR+G  +APG++MTP+SSILEA+N GH+N EP+  R LRG VPR  RE++FGVGLNQ+SDY +ER  PL  N  ++AN  GSL+AGVV+GYLSHVPHNLST KLL P  SY QL+A FV+ SVP  + P           R  LA ++PRGV++RT QI GSF ILNG I  ++     ++ RA+
Sbjct:  123 MKRERFLNMLREKPELSVQIAEGLCEELRKGSKKYSTPMLEQTQTEVNLSAVSIAAGIESYYRSALNAKINQSLTGVKASYFPNMHIQVPTRITYICGFKLLRSYFDQNVQPEAYNNN--ETAVRLGTAVAPGIIMTPVSSILEATNAGHLNPEPMHTRWLRGIVPRAGREIIFGVGLNQMSDYFQERLEPLTGNNPMLANALGSLSAGVVSGYLSHVPHNLSTLKLLDPSASYGQLYAKFVQTSVPPSVEPIIAHWPAQTLVRSVLATLWPRGVMVRTAQIVGSFIILNGTINYLQLKEHLKIQRAI 428          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A2V3IIW6 (Glycine cleavage system transcriptional repressor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIW6_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 1.920e-92
Identity = 147/187 (78.61%), Postives = 163/187 (87.17%), Query Frame = 0
Query:  330 RAAEPAAATDADARPHHAVISVAGRDRTGIVNTFTTAVEKYSANIEESKMAILGGDFAMIVYVSMKLDADAADLERVLHEQLPNFSITLRTTTAPTEAQLDEPMWRISVEAPDQPGIANAVSQALATHGGHVHEMETETSTAPFAGYALFILNGRVSMADKQLDNISDALTQVEEKFGASITLDQIS 516
            R  EP +    D RPHHAV+S+AG+DRTGIVNTFT AV+ Y ANIEESKMAILGGDFAMIVYVSM+   DA  LE +L+++LP FSITLRTTTAP E   ++PMW ISVEAPDQPGIANAVSQALATHGGHVHEMETET+TAPFAGYALF+LNGRVSMAD +LDNIS+ALTQVEEKFGASITLDQIS
Sbjct:   35 RTPEPVSDASPDPRPHHAVVSIAGQDRTGIVNTFTNAVQHYKANIEESKMAILGGDFAMIVYVSMENPQDAGALEAMLNDKLPGFSITLRTTTAPAEEHPEQPMWTISVEAPDQPGIANAVSQALATHGGHVHEMETETNTAPFAGYALFVLNGRVSMADSELDNISEALTQVEEKFGASITLDQIS 221          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A5J4YI42 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI42_PORPP)

HSP 1 Score: 298 bits (764), Expect = 6.200e-92
Identity = 160/306 (52.29%), Postives = 209/306 (68.30%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAP-NALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVP---EQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRR 302
            M R    A L +   +  Q++ S+  ++   +R F TPLL Q   E+N+ AV VA+ +ESYYRSALN+LLN RL+G+ A LFPNMHVQVP RV+YI GFK LR + DR +DA+ +        VR+   +APG++MTPISSILEASN GH N E +  R +RG +PR  RE++FGVGLNQLS++ EER  P+   N ++AN GGSL AGVV+GYLSHVPHNLST+KL+ P + Y +L+  FV KSVP   + +V    P +    AR   A VFPRGV+IRT QI GSFAILNG+I +++T   R+
Sbjct:  128 MMRGPLLALLEQRPQIQAQMIGSVCRELRRGSRKFATPLLEQHGKEINVPAVTVAATMESYYRSALNSLLNARLTGVQAELFPNMHVQVPVRVMYINGFKGLRTLFDRHVDANAYEYPTM---VRLATAVAPGIIMTPISSILEASNAGHSNPEAMTTRWMRGVLPRGLREIIFGVGLNQLSEFFEERILPVVEGNTVLANAGGSLCAGVVSGYLSHVPHNLSTYKLMSPHKGYRELYRFFVDKSVPAAVDNVVADWHPTART-VARSFFATVFPRGVVIRTAQIVGSFAILNGIINIIQTQEYRK 429          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A7S3DNI1 (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNI1_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.300e-82
Identity = 152/313 (48.56%), Postives = 206/313 (65.81%), Query Frame = 0
Query:    1 MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTP-LLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLA--PNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFA-LFVRKSVP---EQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSRRRMSRA 306
            M R  F + LR+   ++  + E LS+++   +R + TP LL ++  +++  AVA+A+ +ESYYRSALNALLN RL+GI A  FPNMH+QVP RV YI GFK LRA+ +  ++ +++      V + +   IAPGV+MTPISS+LEASN GH+N E + +R +RG VPR AREV+FG+GLNQ+SDY EER+       N  + NM GSLTAGVV+GY SHVPHNLST+KL++P +SY+ L+   FV+ SV    E  V      +   A R   A +FPRG++IRT QI GSF ILNG I  +      +  RA
Sbjct:  118 MRRLNFLSLLRQQPEIAIGIAEGLSDEIRNGSRKYVTPFLLQKQQTDISYPAVAIAAGIESYYRSALNALLNARLTGIKADFFPNMHIQVPTRVSYIVGFKGLRAMFEEHVNPEEFSVGPTTVGLAMA--IAPGVIMTPISSVLEASNAGHMNKEAMAKRWMRGIVPRGAREVIFGLGLNQMSDYFEERFASFYGFENKALCNMAGSLTAGVVSGYFSHVPHNLSTYKLMEPHRSYADLYMNQFVKSSVHPVLETWVRTWESQTAKTAIRTIAATIFPRGLMIRTTQIVGSFMILNGTINYLSQKEHEKALRA 428          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A7S4LI39 (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LI39_9EUGL)

HSP 1 Score: 270 bits (690), Expect = 3.640e-82
Identity = 145/277 (52.35%), Postives = 186/277 (67.15%), Query Frame = 0
Query:   16 LSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAPNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLI 292
            L+  +V  L++++ + TR  RTPLL Q+S    + A+++A+ +ES+YRSALNA +N  L+G S  LFPNMH+QVP RV+YI GFK LR   D  ID  +    A     R+G   APG+LMTP+SS+LEA+N GH+N EP+  R LRG VPR AREV+FGVGLNQLSDY EER  PL  N  +    GS+TAGV++GY SHVPHNLST KLL P QSY +LF  +  +      VP ++  +        +ACVFP+ VLIRT+QI GSF ILNG I
Sbjct:  124 LAQSVVIGLTQELKSVTRSMRTPLLEQKSARAPIPAISIAAAIESFYRSALNAYINWSLTGKSNHLFPNMHIQVPTRVVYINGFKLLRMSFDERIDPAKTSNPAL---TRLGLAFAPGILMTPVSSLLEATNAGHMNKEPMYTRWLRGLVPRCAREVIFGVGLNQLSDYCEERMPPLIENKALRTALGSMTAGVLSGYFSHVPHNLSTLKLLNPAQSYLELFRSYAARHTI--YVPSSIKGTSRDVLATTIACVFPQAVLIRTMQIVGSFVILNGTI 395          
BLAST of Ggra6109.t1 vs. uniprot
Match: A0A7S0QR06 (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QR06_9CRYP)

HSP 1 Score: 260 bits (664), Expect = 3.460e-78
Identity = 148/290 (51.03%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   12 RSAPLSTQLVESLSEQVFANTRH----FRTPLLSQRSNELNLSAVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFKSLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGHVNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERY-RPLAPNALVANMGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLVPRALPASMVPAARVALAC----VFPRGVLIRTVQICGSFAILNGLI 292
            + A  +TQ+V SLS +V   + H     RTPLL QR  + N+ AV++A+ VES+YRS LNA +N RLSG    LFPNMH+Q+PAR++YI GFK LR  LD  +  D++   ++  AVR+   IAPG++MTP+SSILEA+N GH+N EP+  R +RG   R+ REV+FG+GLNQ+SDY EER    L     + N  GSL AGV +GYLSH+PHNLST KL+ P +SY       V +S         +P SM PAAR ALA     +FPR V+IRT QI GSF ILNG I
Sbjct:  119 QDASFATQVVHSLSVEVRRQSNHVRWLMRTPLLEQRPKKTNVIAVSLAASVESFYRSGLNAAMNARLSGQWGKLFPNMHIQMPARIMYINGFKGLRQFLDLTVKPDEY---SSPTAVRLAAVIAPGIIMTPLSSILEATNAGHMNPEPITTRWMRGISWRMVREVIFGIGLNQMSDYWEERIPHSLVEAEALRNALGSLVAGVCSGYLSHIPHNLSTLKLMTPSKSYMDHLGALVSQSEGR------VPHSMSPAARRALATGIAIMFPRAVMIRTAQIVGSFVILNGTI 399          
The following BLAST results are available for this feature:
BLAST of Ggra6109.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ002.180e-15672.84CRP-like cAMP-activated global transcriptional reg... [more]
R7QJC91.160e-12964.24Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3L8661.580e-9852.75Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S0ZKF58.530e-9752.87Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1Z5JV401.300e-9450.65Cyclic nucleotide-binding domain-containing protei... [more]
A0A2V3IIW61.920e-9278.61Glycine cleavage system transcriptional repressor ... [more]
A0A5J4YI426.200e-9252.29Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3DNI11.300e-8248.56Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4LI393.640e-8252.35Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0QR063.460e-7851.03Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 485..505
NoneNo IPR availableGENE3D3.30.70.260coord: 430..515
e-value: 6.6E-17
score: 63.6
NoneNo IPR availableGENE3D3.30.70.260coord: 344..423
e-value: 6.2E-17
score: 63.2
NoneNo IPR availablePFAMPF13740ACT_6coord: 347..418
e-value: 1.3E-9
score: 37.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..338
NoneNo IPR availablePANTHERPTHR34875UPF0237 PROTEIN MJ1558coord: 344..515
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..518
IPR002912ACT domainPROSITEPS51671ACTcoord: 435..517
score: 12.153257
IPR045865ACT-like domainSUPERFAMILY55021ACT-likecoord: 346..417
IPR045865ACT-like domainSUPERFAMILY55021ACT-likecoord: 435..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:573819..575853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6109.t1Ggra6109.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 573819..575853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6109.t1 ID=Ggra6109.t1|Name=Ggra6109.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=519bp
MSRAAFRAQLRRSAPLSTQLVESLSEQVFANTRHFRTPLLSQRSNELNLS
AVAVASVVESYYRSALNALLNRRLSGISAPLFPNMHVQVPARVLYIAGFK
SLRAVLDRDIDADQWHTHAARVAVRVGKTIAPGVLMTPISSILEASNVGH
VNAEPLLRRSLRGSVPRLAREVVFGVGLNQLSDYMEERYRPLAPNALVAN
MGGSLTAGVVAGYLSHVPHNLSTFKLLQPQQSYSQLFALFVRKSVPEQLV
PRALPASMVPAARVALACVFPRGVLIRTVQICGSFAILNGLILLVETDSR
RRMSRAMESAASGGGEAEEGVKVAQSPPPRAAEPAAATDADARPHHAVIS
VAGRDRTGIVNTFTTAVEKYSANIEESKMAILGGDFAMIVYVSMKLDADA
ADLERVLHEQLPNFSITLRTTTAPTEAQLDEPMWRISVEAPDQPGIANAV
SQALATHGGHVHEMETETSTAPFAGYALFILNGRVSMADKQLDNISDALT
QVEEKFGASITLDQISSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
IPR045865ACT-like_dom_sf