Ggra6098.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6098.t1
Unique NameGgra6098.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length492
Homology
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A2V3IT21 (Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT21_9FLOR)

HSP 1 Score: 798 bits (2062), Expect = 6.220e-289
Identity = 401/492 (81.50%), Postives = 439/492 (89.23%), Query Frame = 0
Query:    1 MGFVGSPLVHPSRSTYGQKCSSR-KHHPSATAAHPKAANPASISSPTTVSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHSIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGEPVE 491
            M F+ SP +   +++  +   S  K  PSATA  P +    S +SPTTVSLVSLGCPKNVTDAEV+LSD+AK+ I IQ+S AENPADVVVVNTCGFVEDAKRESIDAIL AA+GKE GTKGVIITGCLAQRYADLLAEELPE+DAVVGFEHYHELPQRV+ALAA+E    LEKVKVGITDVPFRPEHER RLGPKHSVYVRLAEGCSH+CTFCAIPGQFRGKFRSK WD+LTKEIDTLV AGAKELVFIAEDTNQ+GMD PP+E+RRLS LLHHVA NNT AKW+RLLYCYPSYFT  L+ AIA LDVVCKYID+PLQHISD +L+RMNRPGR+HTEELL+RLR+ IP LALRTTFIVGFPGETEEDH ELV+FIK NRFN AGFFVYSEEEGTPAA + DQVP E+REYRRDELVSIQQ+IQEEIASERVGQ+L V+VD+IE+GHSIGRCRFDAPEIDGCVHILQ+IEPGTILKVRILGTSSFDLYGEPVE
Sbjct:    1 MAFI-SPAIWRRQASRAETIRSLCKRQPSATAMQPVSTQHRSNTSPTTVSLVSLGCPKNVTDAEVMLSDMAKHNIKIQASDAENPADVVVVNTCGFVEDAKRESIDAILQAAEGKERGTKGVIITGCLAQRYADLLAEELPEVDAVVGFEHYHELPQRVRALAANEKQESLEKVKVGITDVPFRPEHERFRLGPKHSVYVRLAEGCSHSCTFCAIPGQFRGKFRSKDWDSLTKEIDTLVEAGAKELVFIAEDTNQFGMDFPPQETRRLSDLLHHVASNNTNAKWLRLLYCYPSYFTNELIEAIAQLDVVCKYIDMPLQHISDRILKRMNRPGRKHTEELLSRLRQEIPDLALRTTFIVGFPGETEEDHRELVDFIKTNRFNHAGFFVYSEEEGTPAATYDDQVPLEIREYRRDELVSIQQRIQEEIASERVGQVLHVLVDRIENGHSIGRCRFDAPEIDGCVHILQQIEPGTILKVRILGTSSFDLYGEPVE 491          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A7S2ZK52 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZK52_9RHOD)

HSP 1 Score: 528 bits (1359), Expect = 3.610e-182
Identity = 266/445 (59.78%), Postives = 336/445 (75.51%), Query Frame = 0
Query:   45 PTTVSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGT-KGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHSIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGE 488
            P +VSLV LGCPKN  DAEV+L DL + GI++     E+ ADV++VNTCGF+EDAKRESI+AIL AA+ K+  T KG+++TGCLAQRYA  LAEELPE+DAVVGFE Y  L ++V+ +A +        V+VG   VPFRPE  R RL P+H+ Y+R+AEGC HAC+FCAIP  FRGKFRSK WD + +E   L A GA EL  IAEDTNQYG+D   E++RRLS LL+ +A +    +WIRLLYCYPSYFT+ L+ AIAN+D V KYIDIPLQHISD VL+RMNRPG +HT+ LLNRLR+ IP +  R+TFI GFPGET+ DH ELV F+K  RF++ GFF YSEE+GTPAA    Q+P+E++  RRDEL SIQQ IQ E A E++G+++DV+VD+IEDG ++GR RFDAPEID  VH+LQ I PG ++K R++ +  FDL  +
Sbjct:   35 PVSVSLVPLGCPKNTVDAEVMLGDLEQQGISVLDD--ESSADVIIVNTCGFIEDAKRESIEAILAAAELKQGSTTKGIVVTGCLAQRYASQLAEELPEVDAVVGFEGYKSLGEKVRKIALNGKKKSRSTVEVGKATVPFRPEWGRRRLAPRHTAYMRVAEGCDHACSFCAIPS-FRGKFRSKPWDQVVEEARLLAAKGAVELNLIAEDTNQYGIDFK-EDNRRLSDLLYELA-DIEGIQWIRLLYCYPSYFTDELIDAIANIDKVVKYIDIPLQHISDPVLKRMNRPGAKHTKRLLNRLRDRIPEVEFRSTFITGFPGETQRDHEELVNFVKDFRFHRGGFFTYSEEDGTPAAVLDRQIPEEIKTARRDELTSIQQDIQAEFAEEKIGKVIDVLVDRIEDGRAVGRARFDAPEIDCIVHLLQDIPPGLVVKARVVESDLFDLLAD 474          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A5J4YVQ9 (Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVQ9_PORPP)

HSP 1 Score: 491 bits (1263), Expect = 8.990e-167
Identity = 247/442 (55.88%), Postives = 326/442 (73.76%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQ-VPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHSIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGE 488
            VSLV+LGC KN  DAEV+L DL +NG+ I   G +  +DVV+VNTC F+EDAK  SI+AILHA   K    +GV++TGCLAQRYA  LA+ELPE+DAVVGFE+Y ++P+ V  +          +V VG  +VPFRPE ER RL P+H+ Y+R AEGCSHAC+FC IP  FRG FRSK WD++  E   L A+G  EL  IAEDTNQYGMD  P++ RRL  LL+ +AK     +WIRLLYCYPSYF++ L+ AI ++  V KY+DIPLQH+SD VLR MNRP   HT ++LNR+R+ IP + LRTTFI GFPGET+EDH  L + +++ RF +AG F YS EEGTPAA   D  V  +++E R DEL+SIQQ+I+E+ A ++VG+ LDV++D+ +DG+++GR RFDAPEID  V+++Q ++PGT+++V+I+GT +FDL GE
Sbjct:  104 VSLVALGCAKNTVDAEVMLGDLQRNGVRIV--GEDEESDVVIVNTCAFIEDAKTTSIEAILHAVGRKTGSVRGVLVTGCLAQRYASDLADELPEVDAVVGFENYSQVPELVLKILRKAPQGKASRVAVGGANVPFRPEWERWRLTPRHTAYLRAAEGCSHACSFCIIPS-FRGLFRSKPWDSVLDEARRLAASGVVELNLIAEDTNQYGMDWGPKDPRRLHDLLYELAKI-PGIRWIRLLYCYPSYFSDELIAAIRDIPEVVKYVDIPLQHMSDRVLRAMNRPPLDHTLKILNRIRDEIPDITLRTTFISGFPGETKEDHEILKQALREFRFRRAGIFSYSVEEGTPAALLEDLFVDPDVKESRCDELISIQQEIEEDFAKQQVGKELDVLIDRHQDGYAVGRTRFDAPEIDSMVYVVQLVDPGTMVRVKIVGTHAFDLIGE 541          
BLAST of Ggra6098.t1 vs. uniprot
Match: L1JS76 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JS76_GUITC)

HSP 1 Score: 471 bits (1211), Expect = 7.220e-160
Identity = 240/436 (55.05%), Postives = 313/436 (71.79%), Query Frame = 0
Query:   55 CPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGH--SIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGE 488
            CPKN  DAEV+L DL K G +I     +  ADVV+VNTC F+E+AK ES+ A+L A   K+   KGV+ITGC+AQRYA  LA+ELPE+DAVVGFE Y ++  +++++      A + +V VG TDVPFRPE ERVR+  +H+ ++R+AEGC H CTFCAIP  +RG+FRSK++D + +E   LVA G  EL  IAEDTNQ+G D    + RRL+ LLH +A    E + I LLYCYPSYF++ L+ AIA++D VCKYID+PLQHISD VL+ MNRP R HT  LL +LRE IPGL LRTTFI GFPGET++DH ELV+F+K  +F +AG F YSEEEGTPAA+  DQVP +++E RRDEL+SI Q+ Q + A   VG+ ++V++DK+ +G   SIGR R DAP+ID  VH+ Q + PGT +   I+ T  FDL  +
Sbjct:   27 CPKNTVDAEVMLGDLKKRGFDIVRRPRD--ADVVIVNTCAFIEEAKTESVQAVLEAVDLKKSSAKGVVITGCMAQRYAQELADELPEVDAVVGFEKYADIGNQIESIITKSGFA-MPEVAVGSTDVPFRPEWERVRITQQHAAFLRVAEGCDHKCTFCAIPS-WRGRFRSKSFDAIMEEARELVATGVTELNLIAEDTNQWGQDFGAADKRRLADLLHSLA-GIEEVRRISLLYCYPSYFSDELIDAIASIDKVCKYIDMPLQHISDPVLKAMNRPPREHTVSLLKKLRERIPGLVLRTTFISGFPGETDKDHRELVDFVKAMKFERAGVFAYSEEEGTPAAKMLDQVPADVKERRRDELISIVQKCQRKFAESLVGKRVEVVIDKVGEGGFGSIGRTRADAPDIDCVVHLAQTLRPGTYVDAHIVDTFDFDLVAD 457          
BLAST of Ggra6098.t1 vs. uniprot
Match: M2XFU7 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XFU7_GALSU)

HSP 1 Score: 469 bits (1208), Expect = 2.780e-159
Identity = 238/440 (54.09%), Postives = 314/440 (71.36%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHSIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYG 487
            V+LVSLGCPKN  DAEV+L +L + G  I     +  AD V++NTCGF+EDAKRES+  I  A   K+   KGVI+TGCLAQRYA+ LA ++P++DAVVGFE Y  + Q +  + + +      +V+VG   VPF+ E+ R  L PKHS Y+R+AEGC+H C+FC+IP  FRG+FRSK + ++ +E   LV  G  EL  IAEDTNQYGMD   ++ RRL+ LL+ +A N +  KWIRLLYCYPSYF+  L+RAIA +  V KYIDIPLQH SD +L RMNRP  ++T +LL +L++ IP L LR+TFI GFPGETE+DH ELV FIK+  F++AGFF YS EE T A      VP E+++ R+DELVS+QQ IQE  A + VG+ ++V++DK+E G+S GR  FDAPEIDG V++LQ++ PG I  + ILGT+ +DLYG
Sbjct:   52 VALVSLGCPKNTVDAEVLLGNLKRKGFQIVEKMEK--ADAVIINTCGFIEDAKRESLSFIFQALDWKKKHLKGVIVTGCLAQRYAEELAAQIPQVDAVVGFESYANVAQTLNQIFSQQ---EASRVQVGKATVPFQTEYIRHPLTPKHSAYLRVAEGCNHECSFCSIPS-FRGRFRSKPFQSVIEEAKMLVEGGVCELNIIAEDTNQYGMDFGNQDQRRLADLLYELA-NLSSLKWIRLLYCYPSYFSPALIRAIAEIPQVVKYIDIPLQHASDGILTRMNRPNSQYTRQLLYQLKQNIPELCLRSTFICGFPGETEKDHQELVRFIKELGFSRAGFFTYSLEENTSAYSMDGHVPDEVKQARKDELVSLQQSIQESFAMKWVGKKINVLIDKVEQGYSKGRAYFDAPEIDGVVYVLQQLSPGRIYSIEILGTNGWDLYG 484          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A7S0TPT5 (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TPT5_HEMAN)

HSP 1 Score: 470 bits (1210), Expect = 8.400e-159
Identity = 243/444 (54.73%), Postives = 318/444 (71.62%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQ-VPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGH--SIGRCRFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGE 488
            V+LV+LGCPKN  DAEV+L DL   G +I    ++  ADVV+VNTC F+EDAK+ESI+AIL A   KE G KGV++TGC+AQRYAD L+ ELPE+DAVVGFE Y E+  R++ +        +  V+VG TDVPFRPE ER R+  +H+ Y+R+AEGC H CTFCAIP  +RG+FRSK+++ + +E   LVA+G  EL  IAEDTNQ+G D   E+ RRL+ LLH +A      + IRLLYCYPSYF++ L+ AIA+++ VCKYIDIPLQHI+D VL+RMNRP + HT +LL +++E +PG+ LRTTFI GFPGETE DH ELVEF  +  F +AG F YSEEEGTPAAE  D  VP    + +RD+L S+ Q+ Q   A ++VG+ L+V++D+  +G   S+GR RFDAP+ID CV++ Q   PGT +   I GT  FDL G+
Sbjct:   89 VALVALGCPKNTVDAEVMLGDLQSKGFSIVRHASD--ADVVIVNTCAFIEDAKKESIEAILEAISLKESGAKGVVVTGCMAQRYADELSGELPEVDAVVGFEKYAEIGPRIEEIVTKS-GFSMPTVEVGSTDVPFRPEWERYRITQQHAGYLRVAEGCDHKCTFCAIPS-WRGRFRSKSFEAIMEEAKKLVASGVTELNLIAEDTNQWGQDFGSEDPRRLADLLHEIAAIEDVVR-IRLLYCYPSYFSDELIDAIASIEKVCKYIDIPLQHIADPVLKRMNRPPKDHTVKLLAKIKERVPGVVLRTTFITGFPGETEADHKELVEFCNEWGFQRAGVFCYSEEEGTPAAEMTDLFVPAARSDRQRDQLTSLIQEGQRRFAEQQVGKKLEVLIDRPGEGGFGSVGRTRFDAPDIDCCVYLPQTFPPGTYVDAEITGTFDFDLVGD 527          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A2D8ALE6 (30S ribosomal protein S12 methylthiotransferase RimO n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2D8ALE6_9EURY)

HSP 1 Score: 463 bits (1191), Expect = 2.240e-156
Identity = 246/488 (50.41%), Postives = 336/488 (68.85%), Query Frame = 0
Query:   19 KCSSRKHHPSATAAHPKAANPASISSPTT--VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPL-----EKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHS--IGRCRFDAPEIDGCVHI-------LQRIEPGTILKVRILGTSSFDLYGEPV 490
            K ++R+    + A   +AA  AS  +P    VS+VSLGCPKN  D EV+L DL  NG +I     E  AD +++N+CGFVEDAK ES++AIL A++  + G+K +++TGCLAQRYA+ LA ELPE D +VGFE+Y  LP+ V  L   E +  L      +V+VG    PFR E +R+R+ PKH+ Y+R+AEGC H CTFCAIP  FRG+FRSK WD++  E   L  +G +EL  IAEDTNQ+G+D+   + R L+ LL+ +A+     +W+R+LY YPSYF++ LV+AIA++  VCKYIDIPLQHI++  L RMNRP R+HTE+LL +LR+ IPGLALRTTFI GFPGETEE+H EL+EF ++ +F + G F YSEE+GTPA E+ DQVP+E+R  RRD+LVS QQ+I E+ A  RVG  +DV++D  ++     IGR   +AP+ID  V +       L  IEPG + +  ++G+S FDL  +P+
Sbjct:   25 KSAARRASTKSIAEPDRAAGDASAPAPALKKVSMVSLGCPKNTVDGEVMLGDLYANGFDITDDHDE--ADAIIINSCGFVEDAKNESVEAILEASQLSKDGSKKIVVTGCLAQRYANDLANELPEADVIVGFENYGNLPKTVGGLLGVEAEPGLLIPQQARVQVGGASPPFRAEVKRLRITPKHTAYLRVAEGCDHKCTFCAIPS-FRGRFRSKPWDSIIDEAKALADSGVRELNLIAEDTNQWGIDMRASDGRGLAELLYALAEVEG-IEWMRILYAYPSYFSDELVQAIADIPQVCKYIDIPLQHITNLSLLRMNRPPRQHTEDLLYKLRDRIPGLALRTTFISGFPGETEEEHEELMEFCREFKFERLGAFAYSEEDGTPAMEYPDQVPEEIRAIRRDQLVSQQQEISEDFAMSRVGTDVDVLIDNWDEEMQAFIGRTTLEAPDIDPVVFVTEDKTKGLPPIEPGQMRRCNVIGSSLFDLEAQPI 508          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A7S0Z7Y8 (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z7Y8_9CHLO)

HSP 1 Score: 460 bits (1184), Expect = 2.480e-155
Identity = 247/457 (54.05%), Postives = 320/457 (70.02%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKALAASEVDAPL-----EKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKI-EDGHS-IGRCRFDAPEIDGCVHI-------LQRIEPGTILKVRILGTSSFDLYGEPV 490
            VS+VSLGCPKN  D EV+L DL  NG ++     E  AD ++VN+CGFVEDAK ES++AIL A+K    GTK +I+TGCLAQRYA+ LA ELPE D +VGFE+Y  LP+ V  L   E    L      +V+VG    PFR E +R+R+ P+H  Y+R+AEGC H CTFCAIPG FRG+FRSK WD++ +E   L  +G KEL  IAEDTNQ+GMDL   + R L+ LL  +A+ +   +WIR+LY YPSYF++ L++AIA++  V KYIDIPLQHI++  L RMNRP R+HTE+LL +LR+ IPGLALRTTFI GFPGETEE+H EL++F +  +F + G F YSEE+GTPAAE+ DQVP+++R  RRD+LVS QQ+I E+ A  RVGQ LDV++D   ED  S +GR   +AP+ID  V I       L  +E G + K  I+G+S FDL   P+
Sbjct:   56 VSMVSLGCPKNTVDGEVMLGDLYANGFDVTEEHEE--ADAIIVNSCGFVEDAKNESVEAILEASK-LSGGTKKIIVTGCLAQRYANDLANELPEADVIVGFENYTNLPKTVGGLLGVETSPGLLLPQQARVQVGGASPPFREEVQRLRITPRHYAYLRVAEGCDHKCTFCAIPG-FRGRFRSKKWDSIIEEAKALADSGVKELNLIAEDTNQWGMDLRASDGRGLAELLEALAEVDG-IEWIRILYAYPSYFSDELIKAIADIPQVAKYIDIPLQHITNLSLLRMNRPPRQHTEDLLYKLRDNIPGLALRTTFISGFPGETEEEHEELMQFCRDFKFQRLGAFAYSEEDGTPAAEYPDQVPEDIRAIRRDQLVSQQQEISEDFAMSRVGQELDVLIDGWDEDMQSYVGRTTLEAPDIDPIVFITEDKSKGLPPLEAGQMRKCSIVGSSLFDLEAVPL 507          
BLAST of Ggra6098.t1 vs. uniprot
Match: A0A0U9HJJ6 (Methylthiotransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HJJ6_KLENI)

HSP 1 Score: 454 bits (1169), Expect = 2.280e-152
Identity = 241/453 (53.20%), Postives = 315/453 (69.54%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQRVKAL----AASEVDAPLEK-VKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGH-SIGRCRFDAPEIDGCVHI---LQRIEPGTILKVRILGTSSFDLYGEPVE 491
            V+LV+LGCPKN  DAEV+L DL + G  I      + ADVV+VNTC F+EDAKRESIDAI  A + K    KGV++TGCLAQRY+  LA ELP +DAVVGFE Y +L  +V+ +     AS   + LE+ V VG   VPFR E ER R+  +H+ Y+R+AEGC H CTFC+IPG FRGKFRSK ++ +  E + L A+GA+E+  IAEDTNQ+G D    + RRL  LLH +A+N    KWIRLLYCYPSYFTE L+ AIA++D VCKYIDIPLQHIS +VL+RM RP + H E LL +L+E IPGL LRTTFI GFPGETE DH EL+  +K+  F + G F YS E+GTPAA+   QV +  ++ R+ EL  + +  Q + A +++G+ LDV++D + DGH ++GR ++DAPEID  V I   L    PG++L+ R++G   +DL  EP+E
Sbjct:  108 VALVALGCPKNTVDAEVMLGDLQRQGYQITDD--PDTADVVIVNTCAFIEDAKRESIDAITEAGELKGKSAKGVLVTGCLAQRYSKELASELPFVDAVVGFESYSQLGAQVERILATGTASTSTSSLEQNVLVGTPHVPFRVESERRRITAQHTAYLRVAEGCDHTCTFCSIPG-FRGKFRSKRFEAVVAEANLLAASGAREICLIAEDTNQWGSDFGESDPRRLQDLLHAIAEN-PRVKWIRLLYCYPSYFTEELITAIASIDKVCKYIDIPLQHISAAVLQRMQRPSKTHAEGLLRKLKERIPGLVLRTTFISGFPGETEGDHEELMGAVKEFGFERGGVFAYSREDGTPAADLEKQVGRRTKDRRQCELQDMMRDRQMDWAGQQIGRTLDVMID-VMDGHVAVGRSQYDAPEIDNRVRIEGCLIPFTPGSVLQCRVVGAEDWDLIAEPIE 555          
BLAST of Ggra6098.t1 vs. uniprot
Match: C1MHI6 (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MHI6_MICPC)

HSP 1 Score: 451 bits (1160), Expect = 1.840e-151
Identity = 244/464 (52.59%), Postives = 308/464 (66.38%), Query Frame = 0
Query:   48 VSLVSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAKRESIDAILHAAKGKEHGTKG-----VIITGCLAQRYADLLAEELPEIDAVVGFEHYHELPQR------VKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVRLAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAEDTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVRAIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLALRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFADQVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHS--IGRCRFDAPEIDGCVHI--------LQRIEPGTILKVRILGTSSFDLYGEPV 490
            VS+VSLGCPKN  D EV+L DL  NG ++     +  AD V++NTCGFVEDAK ES+DAIL AA  K    K      +I+TGCLAQRYA+ LAEE+ EID V+GFE Y  LP        V  L   +      +V+VG    PFRPE  R RL P H  Y+R+AEGC H CTFCAIPG FRGKFRSK WD++  E   L   GAKEL  IAEDTNQ+GMD+   + R L+ LL  +A  +   +WIR+LY YPSYF+E L+ AIA++  VCKYIDIPLQHI++  L RMNRP R+HTE+LL++LR+ IPGLALRTTFI GFPGET+E+H +L++F K+ +F + G F YSEE+GTPAAE+ DQV   +RE RRD+L+S QQ I E+ A  RVGQ LDVI+D         +GR   +AP+ID  V +        L  +E G + + ++ GTS FDL   P+
Sbjct:   65 VSMVSLGCPKNTVDGEVMLGDLFANGFDVIDEHED--ADAVIINTCGFVEDAKNESVDAILAAAAMKADSEKNGKKQKIIVTGCLAQRYAEDLAEEMSEIDVVMGFEEYKNLPAEIGQSLGVDVLRQDDGGNKRGRVRVGTASPPFRPEALRKRLTPNHYAYLRVAEGCDHKCTFCAIPG-FRGKFRSKPWDSIVDEAKALADTGAKELCLIAEDTNQWGMDMKASDGRGLAELLERLAVVDG-VEWIRILYAYPSYFSEELIDAIADIPQVCKYIDIPLQHITNLSLLRMNRPPRQHTEDLLHKLRDRIPGLALRTTFISGFPGETQEEHDDLMKFCKEFKFQRLGAFAYSEEDGTPAAEYPDQVELAVRELRRDQLISQQQDISEDFALSRVGQELDVIIDGFNPDFDAWVGRSSLEAPDIDPIVFVSEPEPGSGLPALEMGQMRRCKVNGTSLFDLEAHPL 524          
The following BLAST results are available for this feature:
BLAST of Ggra6098.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT216.220e-28981.50Ribosomal protein S12 methylthiotransferase RimO n... [more]
A0A7S2ZK523.610e-18259.78Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YVQ98.990e-16755.88Ribosomal protein S12 methylthiotransferase RimO n... [more]
L1JS767.220e-16055.05Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
M2XFU72.780e-15954.09Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0TPT58.400e-15954.73Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A2D8ALE62.240e-15650.4130S ribosomal protein S12 methylthiotransferase Ri... [more]
A0A7S0Z7Y82.480e-15554.05Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A0U9HJJ62.280e-15253.20Methylthiotransferase n=1 Tax=Klebsormidium nitens... [more]
C1MHI61.840e-15152.59Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 195..412
e-value: 3.1E-43
score: 159.6
IPR041582RimO, TRAM domainPFAMPF18693TRAM_2coord: 430..490
e-value: 8.1E-17
score: 61.2
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 193..430
e-value: 1.0E-71
score: 243.2
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 202..374
e-value: 8.8E-20
score: 71.7
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 191..424
score: 34.991604
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 47..176
e-value: 4.0E-31
score: 109.3
NoneNo IPR availableGENE3D2.40.50.140coord: 431..491
e-value: 2.9E-16
score: 60.9
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 114..410
e-value: 6.0E-30
score: 99.0
NoneNo IPR availablePIRSRPIRSR000167-1PIRSR000167-1coord: 205..398
e-value: 6.1E-4
score: 17.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 204..406
e-value: 2.0511E-10
score: 58.4989
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 191..421
IPR005840Ribosomal protein S12 methylthiotransferase RimOTIGRFAMTIGR01125TIGR01125coord: 48..487
e-value: 1.8E-135
score: 450.3
IPR005840Ribosomal protein S12 methylthiotransferase RimOSFLDSFLDF00274ribosomal_protein_S12_methyltcoord: 45..490
e-value: 0.0
score: 498.8
IPR005840Ribosomal protein S12 methylthiotransferase RimOPANTHERPTHR43837RIBOSOMAL PROTEIN S12 METHYLTHIOTRANSFERASE RIMOcoord: 46..490
IPR005840Ribosomal protein S12 methylthiotransferase RimOHAMAPMF_01865MTTase_RimOcoord: 46..489
score: 56.320816
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 48..147
e-value: 3.3E-24
score: 84.8
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 46..163
score: 24.870335
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 47..487
e-value: 6.8E-108
score: 359.2
IPR005839MethylthiotransferaseSFLDSFLDG01061methylthiotransferasecoord: 45..490
e-value: 0.0
score: 498.8
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 427..491
score: 9.442102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:539017..540492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6098.t1Ggra6098.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 539017..540492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6098.t1 ID=Ggra6098.t1|Name=Ggra6098.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=492bp
MGFVGSPLVHPSRSTYGQKCSSRKHHPSATAAHPKAANPASISSPTTVSL
VSLGCPKNVTDAEVILSDLAKNGINIQSSGAENPADVVVVNTCGFVEDAK
RESIDAILHAAKGKEHGTKGVIITGCLAQRYADLLAEELPEIDAVVGFEH
YHELPQRVKALAASEVDAPLEKVKVGITDVPFRPEHERVRLGPKHSVYVR
LAEGCSHACTFCAIPGQFRGKFRSKAWDTLTKEIDTLVAAGAKELVFIAE
DTNQYGMDLPPEESRRLSHLLHHVAKNNTEAKWIRLLYCYPSYFTEGLVR
AIANLDVVCKYIDIPLQHISDSVLRRMNRPGRRHTEELLNRLREGIPGLA
LRTTFIVGFPGETEEDHHELVEFIKKNRFNQAGFFVYSEEEGTPAAEFAD
QVPQELREYRRDELVSIQQQIQEEIASERVGQILDVIVDKIEDGHSIGRC
RFDAPEIDGCVHILQRIEPGTILKVRILGTSSFDLYGEPVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR041582RimO_TRAM
IPR023404rSAM_horseshoe
IPR007197rSAM
IPR038135Methylthiotransferase_N_sf
IPR005840Ribosomal_S12_MeSTrfase_RimO
IPR013848Methylthiotransferase_N
IPR005839Methylthiotransferase
IPR002792TRAM_dom