Ggra6096.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6096.t1
Unique NameGgra6096.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length428
Homology
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A2V3J253 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J253_9FLOR)

HSP 1 Score: 654 bits (1686), Expect = 8.750e-234
Identity = 342/429 (79.72%), Postives = 377/429 (87.88%), Query Frame = 0
Query:    1 MVAPIS-DAVTNGVHNNGPTA-LPDDEDVDDQDLKVLRTELAAAANYLQSCIDEEGLHDSIVQAEAAGDALGATNKLADAFIKALDTPEDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKASTMAAAEAFSG 427
            MVAP+S D VTNGVHN GP +  PD  D ++QDL VLRTELAAAA+YLQS I+++GL DSIVQAEAAGDALGATNKLADAFIKALD PE    SGSLEGCMQELLVWVKK+CAMNDDLVDKI  GLCEG SNGELRLRCMALLYNFV E +H KRFTLL ATI LA+KV L+P I+DT+LPK++ F+R W+T + EKR MYKVCYEALKSA++A +AF FNVKQL LYNGATEEEL TA++ TIDVIVQAVRLPKLYRFDTLLELD VKRFE +DGDFK LHELI IFVRDDLA F++FKS+NE  L+K+EIDV VAEDKMRLLTFASLGIDS DLTYDMIA+ALQI QD VEEWVIRAISSGLVDGKINQL+SSVAIYRSTQRMFTREEW PLS+RINIWKENIGELL +LRETR+AST AA EAFSG
Sbjct:    1 MVAPVSEDIVTNGVHNIGPASHAPDIGDGNEQDLNVLRTELAAAAHYLQSRIEQDGLEDSIVQAEAAGDALGATNKLADAFIKALDAPEGPNGSGSLEGCMQELLVWVKKQCAMNDDLVDKICNGLCEGVSNGELRLRCMALLYNFVGEHHHAKRFTLLAATIALAAKVCLVPTIVDTVLPKLESFMRHWQTGIPEKRRMYKVCYEALKSADMAEQAFTFNVKQLGLYNGATEEELKTAEEPTIDVIVQAVRLPKLYRFDTLLELDAVKRFEKLDGDFKRLHELISIFVRDDLAAFAEFKSKNEEFLQKYEIDVAVAEDKMRLLTFASLGIDSPDLTYDMIASALQIPQDQVEEWVIRAISSGLVDGKINQLKSSVAIYRSTQRMFTREEWLPLSERINIWKENIGELLTSLRETRQASTAAAVEAFSG 429          
BLAST of Ggra6096.t1 vs. uniprot
Match: R7QKJ6 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ6_CHOCR)

HSP 1 Score: 496 bits (1278), Expect = 9.950e-172
Identity = 269/402 (66.92%), Postives = 313/402 (77.86%), Query Frame = 0
Query:   38 ELAAAANYLQSCIDEEGLHDSIVQAEAAG-DALGATNKLADAFIKALDTPEDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTS-----------NGELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKASTMAAAEAFSG 427
            EL  AA YL+S    EGL   I +A A+G DAL AT+ LADAF+ ALD P D   S  LEGCMQ +L+W+KK CAMN  LV KI  GLC+G               +LRL+CMALLYN V EDN ++RF+LL++TI+LA+K+ ++ KI+DT+LPKID F+RQW+  V EKR MYKV YEAL+S +   +AFAFNVK L LYNGA EEE  + +D+TIDVIVQAVRL KLYRFDTLLELD VKRF  +  D KLL ELI IFVR DLAVF+DF+++NEALL K+EIDV VAE KMRLLTFASLGIDSQDLTY MIA ALQIS+D VE+WVIRAI SGLVD KINQL SSV+IYRSTQRMFTREEWQPLS+RINIWKENIG+LL  LRETR++ST AA EAFSG
Sbjct:   32 ELLLAAEYLESKTSTEGLTARIDKAVASGADALSATDALADAFLVALDLPIDDFDS--LEGCMQVVLMWLKKECAMNSQLVHKISDGLCKGVKPVPEGGKSQDPRDQLRLKCMALLYNSVSEDNVDERFSLLVSTISLATKIRMVSKIVDTVLPKIDAFMRQWDRDVPEKRLMYKVSYEALRSDHRMEQAFAFNVKHLELYNGAAEEEFLSVEDATIDVIVQAVRLEKLYRFDTLLELDAVKRFGRLQADHKLLFELISIFVRHDLAVFTDFRAKNEALLAKYEIDVAVAEKKMRLLTFASLGIDSQDLTYGMIAKALQISEDEVEDWVIRAIGSGLVDAKINQLTSSVSIYRSTQRMFTREEWQPLSERINIWKENIGDLLANLRETRQSSTTAAVEAFSG 431          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A1X6P9T8 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9T8_PORUM)

HSP 1 Score: 255 bits (652), Expect = 1.200e-77
Identity = 161/394 (40.86%), Postives = 216/394 (54.82%), Query Frame = 0
Query:   38 ELAAAANYLQSCIDEEGLHDSIVQAEAAGDALGATNKLADAFIKALDTPEDQTTSGS---------LEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSAN---LASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENM-DGDFKLLHELIWIFVRDDLAVFSDFKSRN--EALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKA 416
            EL AAA +L     +  L   I    AA + + AT  L+ A   AL+ P      G          LEGC+Q LL  VK  CAM+  +V  +   L  G   G LRLR MALLYN V E     R+ LLL TI LA++V  +  + D+++P++  +++ W        E+Y   Y+AL        A+ AF  N  +L   NG  +  L  A+   +  I  AV LP ++RFDTLLELD V R  +  DG    L  L+ +FV   L  ++ F       A L    +DV+ A  KMRLL+  SLG+DSQ LTYD IA AL +    VEEWVIRAI   L+D K+NQL  +VA++RSTQR F++EEW+PLS+RIN+WKEN+ EL+  L E R +
Sbjct:    4 ELRAAAAHLAFLTGDGDLVARIKTMAAAQEGVAATTALSTALAAALNAPPPADGGGDATKPAGGSDLEGCVQVLLSLVKTVCAMDAAVVTHVARSLSGGDGAGSLRLRSMALLYNSVPEQATTVRYGLLLDTIRLAARVGRVDMVADSVVPQLGRYIQAWGLSKATSGELYGAAYDALAGVGGGVYAAAAFDVNFLRLKTLNGGDDAALDAARAPAMAAIAAAVGLPTMFRFDTLLELDAVTRLRDAGDGAAATLFRLLDVFVNGVLPDWTSFVGGAGVAAALAGAGVDVDAAVHKMRLLSLTSLGLDSQQLTYDAIAAALDVPAGEVEEWVIRAIGLDLIDAKMNQLDRTVAVHRSTQRSFSKEEWRPLSERINVWKENVAELMITLAEARNS 397          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A7S3EB54 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EB54_9RHOD)

HSP 1 Score: 232 bits (592), Expect = 1.330e-68
Identity = 136/369 (36.86%), Postives = 210/369 (56.91%), Query Frame = 0
Query:   33 KVLRTELAAAANYLQSCIDEEGLHDSIVQAEAAGDALGATNKLADAFIKALDTP-----EDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFA----FNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPL 392
            K L   L AA  +L     +E L  S+ QA+ A D +   + +A+ ++ AL+ P     ++   S + EGC+Q ++   +  C M  DLV  I +GLC   + G++R+R +A LYN +   +  +RF  L+  I L++K+  + K LD++  ++  +++ ++  V +KR +Y  C EALKS     +A      FN++ L  YNG   EEL +  D     +V A+ LPKL++ D LLE+  V R +  D     L+ L+ I V+DDLAV+  F + N + +    +      DKMRLLTFA+LG  S +L Y  I  AL I ++ VEEWVIRAISSGL+  K+NQ+  +V ++RST R F+ ++WQPL
Sbjct:   20 KSLYEALVAALTFLSQRSGQEDLLASVEQAQQAEDFMYLMSLIANGYVAALNAPVKEDDDEDVVSENFEGCIQVIVGVFRMVCNMETDLVVDIASGLCANENLGDMRMRSLAFLYNSLPTADSARRFKFLVMLIELSAKLQEVDK-LDSVFSRVPDYVKGYDLNVEDKRILYSRCSEALKSTKALEKALEKALDFNIQLLETYNGCPNEELDSVSDVAKSSVVDAIALPKLFKLDMLLEMSAVVRLKEQDN--ANLYRLLEICVKDDLAVYKQFYAENGSFVDSLGLSNSSLTDKMRLLTFATLGNQSNELEYQTIQTALDIPEEEVEEWVIRAISSGLIVAKMNQVTRTVHVHRSTSRSFSADQWQPL 385          
BLAST of Ggra6096.t1 vs. uniprot
Match: M2XSP8 (Proteasome family protein isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSP8_GALSU)

HSP 1 Score: 194 bits (492), Expect = 2.580e-54
Identity = 119/356 (33.43%), Postives = 191/356 (53.65%), Query Frame = 0
Query:   38 ELAAAANYLQSCID-EEGLHDSIVQAEAAGDALGATNKLADAFIKAL-DTPEDQTTSGS----LEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTRE 387
            EL A  ++L++  + ++ L   I Q  A  +     + L D  I A  D P D+ T  S    LEGC+Q +  ++         L   +   L +    G LRLR +  LYN + E   ++R  L +  + +ASKVN++ + L   L + + FL  W    +++R  Y+   EA    N  ++AF F+VK L  +NG  E+ L   +   +    +A+R PKLYRFD LL+LD ++R +N      LL EL+ IFV + L  F DF  RN    ++   D E   +KMRLL+ ASLG++  ++ Y + A  LQ+ Q+ +E WVI+A+  GL++ KI+Q++  + + R++QR+F +E
Sbjct:    8 ELHACIDFLETNTNCQQQLGSQIQQLLAQQNTEKVASLLVDTLIVAFNDPPSDKRTDHSYEESLEGCVQVISGFIFSNQVDRFKLATHLAQKLAQSEPFGPLRLRTVTRLYNSIPETETSQRLELFILNVQVASKVNML-QALAPALTRAEFFLDVWSPSKQDRRRFYQTITEAFDECNNETQAFEFHVKLLETFNGEGEDVLTGVESYAVKACKEAIRQPKLYRFDELLDLDAIQRLKNTKQH-ALLFELLQIFVSEKLEAFVDFVHRNPIYFEEAGFDYEACLNKMRLLSLASLGVEQSEIPYSLAAKTLQVEQEELEHWVIQAVCLGLMEAKIDQMRQVIRVIRASQRVFIKE 361          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A7S0ZIH8 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIH8_9RHOD)

HSP 1 Score: 186 bits (472), Expect = 1.030e-50
Identity = 117/343 (34.11%), Postives = 181/343 (52.77%), Query Frame = 0
Query:   78 AFIKALDTPEDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEE---DNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKH-EIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKA 416
            AF     T + +  + S EG +Q  +  + +   M+     ++   +   +   ELRLR ++LLYN V E   +    RF LLL  I+LA   +    +L ++  K + F   W   + ++R ++     AL +   ++EA  + +K L         E A   D     +V A+RL   +R D LLE+ +V+  E+ +    LL  L+ I V   L+ ++ + S+N   L+    +  E    KMRLLTFASLG+D Q+LTYD +++AL + +   E WV+RAIS GLVD +++Q+Q  V I RSTQR+FT+E W+PL  RI +WK N+ EL   L   R A
Sbjct:   93 AFADEASTIDRKRFNSSFEGAVQVTVGMLAEYADMDGSAALELGDSVASKSDGCELRLRALSLLYNAVSESTAEGIKVRFQLLLRMISLAQNAHK-SALLRSVFDKSEQFADSWSLSLVDRRVLFDAISTALLNDGFSNEAHEYELKALK---SVDSNETAADADRAAKTVVSAIRLDSRFRLDELLEIPSVQALESSNA---LLWGLLNILVTGSLSDYTAYASKNGPFLESELRLSHEALLTKMRLLTFASLGMDKQELTYDEVSSALDVPKSETEMWVVRAISFGLVDARMDQIQQKVTIIRSTQRVFTKEHWKPLHDRITLWKNNLDELSSILSSNRSA 428          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A5J4Z885 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z885_PORPP)

HSP 1 Score: 174 bits (441), Expect = 4.110e-46
Identity = 123/384 (32.03%), Postives = 198/384 (51.56%), Query Frame = 0
Query:   60 VQAEAAGDA--LGATNKLADAFIKA------LDTPEDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNHNK---RFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKS--ANLASE--------AFAFNVKQLSLYNG--ATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVR---DDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKAS 417
            +Q E A DA   GA  K A A + A      L     +    SLEG  Q  +  +     M+ + V K+   +     +G +RLR  +LLYN V ++       R+ +L+  +  A     +P I+  +  K+D F+++W   + +++ +++   +AL+S  AN            A  F+ K L  ++   A++ +  T Q+     ++ A+ L   +RFD  LE++ V++ E+       L EL+ IFV    DD   F++     + L     +D E    KMRLLTF SLGI  Q+L+Y  +A AL++    VE+W+I+AIS GLVD K++Q+Q  V + R+T R+F++E+WQPLS RIN WK N+ +LL  L    + S
Sbjct:   67 IQIETAADAGEAGAAQKDATATVAANAAAVLLGNSVAKQRKTSLEGVAQVAMSALNTYAQMDQEAVRKLSANVSARKEDGAIRLRINSLLYNAVSDETPEGAAVRYEILMNMVRSAKDCGRVP-IMRPVFLKVDGFMQKWNLDLAKRKALFEEIADALRSHAANARKPVKDEYQELALEFSTKALVAFDAEKASDTDQQTEQEKAASAVLGAIMLESRFRFDEWLEIEAVRKLESSHPH---LWELLNIFVCKIIDDYIKFAE--EHGDYLQNTLHLDHEYCLTKMRLLTFTSLGIQCQELSYGDVAKALRVEAAEVEDWIIQAISCGLVDAKLDQIQEKVIVNRATHRVFSKEQWQPLSARINAWKVNLDDLLDVLHRRSQMS 444          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A7S0T610 (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T610_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 6.970e-45
Identity = 110/343 (32.07%), Postives = 180/343 (52.48%), Query Frame = 0
Query:   78 AFIKALDTPEDQTTSGSLEGCMQELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEE---DNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKH-EIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKA 416
            AF +A    +++  S S+EG +Q  +  + +    + D +  +   +   T   ++RLR ++ LYN       ++   R+ +LL  I    +  L    L  +  K++ +  QWE    ++R +      AL +    + A  + +K L   + A    +    +    V+ Q++ L  ++RFD L +L++V+  E+      LL EL+ I +   L  +  F + N A +    ++  E    KMRLLTFASLGI  Q+L+Y+ +A+AL++  D VE WVIRAISSGL+D ++++L S V I RST R+FT++EWQPL QRI +WK N+  L   L   R A
Sbjct:   62 AFDEATRVAQNKLDS-SVEGAVQVAIGALIEYADNDADAMRSLGGDVASRTDRADVRLRALSSLYNAAPNGRGEHGRLRYEMLLLVIAFGERAGL-SSALHPVFAKVEEYGTQWELSPADRRGLLDAVASALVAGGDLAAAHEYKLKALHEVDPAANRSIEAEAERAAAVVTQSIMLDNVFRFDELPDLESVRALEHTHA---LLWELLNILISGGLKEYLAFHNANSAYVADTLKLSHEALVRKMRLLTFASLGIAKQELSYEEVASALEVEVDEVEAWVIRAISSGLLDARVDELGSRVVINRSTTRVFTKQEWQPLHQRIELWKRNLDALSSMLAAKRAA 399          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A813JJ04 (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JJ04_POLGL)

HSP 1 Score: 156 bits (394), Expect = 9.900e-40
Identity = 105/313 (33.55%), Postives = 164/313 (52.40%), Query Frame = 0
Query:  117 VDKIRTGLCEGTSNG-------ELRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWET--PVREKREMYKVCYEALKSANLASEAFAFNVKQLSLYNGATEEELAT--AQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRF--ENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETRKA 416
            + K  T LCE  S+        ELRLR + +LYN         R+ +    +  A+K  L  +IL   L  +D ++  W+    V +KR +Y      L++     +AF +  +   L+ G + E ++    QD+TI +I  AV+LP + +FD +L LDTVK       DG  KL      +F   D+    DF+ +NEAL K+HE+  E A  KMRLLT A++     +L+ + +A++L  S D VE WV+RAIS G++DG+I+QL   V +  + QR F   EW  L  +++ W EN+  ++  + E + A
Sbjct:   93 LSKATTRLCELFSSAHKPDQQPELRLRLLMMLYNTFNNPTFEFRYRVFKYALDYAAKAELFDQILPY-LEFLDSWMVDWKAYLTVDDKRALYFDISTYLRALGKKVDAFTYLKQYHQLFKGESAENMSKKQVQDATIQLIKDAVQLPAVIQFDDILVLDTVKELGKTKQDGLVKLCE----VFYSGDVKSLQDFQKKNEALFKEHELVFEDAMAKMRLLTLATVAHGRSELSLEEVASSLDESPDNVERWVVRAISEGVLDGRIDQLNRKVLVKSAFQRKFDTNEWAFLDGKLSCWIENLEHVIKFIGEQKVA 400          
BLAST of Ggra6096.t1 vs. uniprot
Match: A0A5J5AHA4 (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5AHA4_9ASTE)

HSP 1 Score: 153 bits (387), Expect = 1.190e-38
Identity = 92/287 (32.06%), Postives = 168/287 (58.54%), Query Frame = 0
Query:  133 LRLRCMALLYNFVEEDNHNKRFTLLLATITLASKVNLIPKILDTILP---KIDMFLRQWETPVREKREMYKVCYEALK-SANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVRLPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSRNEALLKKHEIDVEVAEDKMRLLTFASLG-IDSQDLTYDMIANALQISQDAVEEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWKENIGELLGALRETR 414
            LRL+ M  LYN +E  N   +F + +  + LA  VN   K+ + I+P   K+D FLR+W   ++++RE++      LK + +LA ++F F  K L+ ++G     +  A++  +  I++ V++P +++ D LL++  V + E  D  + L+++L+ IF+   L  + DF + N  LLK + +  E    KMRL++   LG  +S  + Y +I + LQI+ D VE WV++AI++ L+D K++Q+   V + R T+R+F + +WQ L  ++ IW+ NI  ++G ++  +
Sbjct:  117 LRLKIMFNLYNLLE--NPYSQFFVYMKALNLA--VN--GKVAENIIPSFKKMDNFLREWHIGIKDQRELFLAVSNVLKENKSLAKDSFKFLTKYLATFSGEDASIIGEAKEEAVRTIIEFVKVPDIFQCD-LLDMPAVAQLEK-DAKYALVYQLLNIFLTQRLDAYFDFHAANSTLLKSYGLVHEDCIVKMRLMSLVDLGSAESGQIPYALIKDTLQINDDEVELWVVKAITAKLMDCKMDQMNQIVIVSRCTERVFGQHQWQALRAKLAIWRGNIANVIGTIQANK 395          
The following BLAST results are available for this feature:
BLAST of Ggra6096.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2538.750e-23479.72Eukaryotic translation initiation factor 3 subunit... [more]
R7QKJ69.950e-17266.92Eukaryotic translation initiation factor 3 subunit... [more]
A0A1X6P9T81.200e-7740.86Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3EB541.330e-6836.86Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2XSP82.580e-5433.43Proteasome family protein isoform 2 n=2 Tax=Galdie... [more]
A0A7S0ZIH81.030e-5034.11Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J4Z8854.110e-4632.03Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S0T6106.970e-4532.07Eukaryotic translation initiation factor 3 subunit... [more]
A0A813JJ049.900e-4033.55Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J5AHA41.190e-3832.06Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 310..399
e-value: 1.1E-12
score: 58.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..29
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 89..416
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 310..399
e-value: 1.1E-12
score: 58.1
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 279..372
e-value: 7.0E-11
score: 42.6
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 214..381
score: 20.628622
IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7PANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 89..416
IPR027528Eukaryotic translation initiation factor 3 subunit MHAMAPMF_03012eIF3mcoord: 29..416
score: 19.218349
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 322..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:536613..537896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6096.t1Ggra6096.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 536613..537896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6096.t1 ID=Ggra6096.t1|Name=Ggra6096.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=428bp
MVAPISDAVTNGVHNNGPTALPDDEDVDDQDLKVLRTELAAAANYLQSCI
DEEGLHDSIVQAEAAGDALGATNKLADAFIKALDTPEDQTTSGSLEGCMQ
ELLVWVKKRCAMNDDLVDKIRTGLCEGTSNGELRLRCMALLYNFVEEDNH
NKRFTLLLATITLASKVNLIPKILDTILPKIDMFLRQWETPVREKREMYK
VCYEALKSANLASEAFAFNVKQLSLYNGATEEELATAQDSTIDVIVQAVR
LPKLYRFDTLLELDTVKRFENMDGDFKLLHELIWIFVRDDLAVFSDFKSR
NEALLKKHEIDVEVAEDKMRLLTFASLGIDSQDLTYDMIANALQISQDAV
EEWVIRAISSGLVDGKINQLQSSVAIYRSTQRMFTREEWQPLSQRINIWK
ENIGELLGALRETRKASTMAAAEAFSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR045237COPS7/eIF3m
IPR027528eIF3m
IPR036390WH_DNA-bd_sf