Ggra6088.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6088.t1
Unique NameGgra6088.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Homology
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A2V3J682 (Polyketide_cyc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J682_9FLOR)

HSP 1 Score: 215 bits (547), Expect = 3.190e-68
Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 0
Query:   35 PPARITPTCVWVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDN-DFVGRFVEDTLLADLKRFRAVALLNRRKRLRSTEVSTS 199
            P  R+TPTCVWVERSAT+ +EM P EAYDYYIDLEAMPKWS WL+SVEVDK DGDVSRWTLAS+GITISW+ARNT V+                  V+F      NC +TLAVEFD+P ++A + +N DF+GRFVE+TL+AD+KRFR+VALLNRR+RLRS ++  S
Sbjct:    7 PQTRVTPTCVWVERSATICIEMPPEEAYDYYIDLEAMPKWSTWLRSVEVDKEDGDVSRWTLASRGITISWKARNTKVKXXXXXXXXXXXXXXXXXXVVFEDKGQQNCSVTLAVEFDVPQSIASVINNNDFIGRFVEETLMADMKRFRSVALLNRRRRLRSRKIPAS 172          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A7S1EQM7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQM7_9RHOD)

HSP 1 Score: 164 bits (415), Expect = 9.460e-48
Identity = 78/152 (51.32%), Postives = 111/152 (73.03%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVALLN-RRKRLRSTE 195
            W+E  A V ++    E +  Y DLEAMPKWSPWL+SVEVD +D  +S+W+LA++GI++SW+ARNT VR  +IIAW+S  GL NRG+VLF  ++  + K+ L+V F +P  +A I +NDFV  FV+ TLL+DL+RFR + L   RRKR++++E
Sbjct:   57 WIENVAEVQIQAPAEEVFLTYSDLEAMPKWSPWLRSVEVDPSDETISKWSLAARGISVSWKARNTEVRSPDIIAWESIDGLPNRGKVLFSPIKENHTKVQLSVAFQVPSFLASIMENDFVSTFVQKTLLSDLERFRTILLREYRRKRMKNSE 208          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A1X6NW24 (Polyketide_cyc domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW24_PORUM)

HSP 1 Score: 151 bits (381), Expect = 2.200e-42
Identity = 80/173 (46.24%), Postives = 105/173 (60.69%), Query Frame = 0
Query:   34 KPPARITPTCVWVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGV----------------------ENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVAL 184
            +PP   +P   W+E+SATV VE      Y  + DLEA PKWSPWLKSV+VD  D D+SRW+LAS+G+ +SWQARNT V   E+IAW+S  GL N+G V F                         +    ++TLA+ FD+P  +A +  +D VG++VE TLLADLKR+RAV L
Sbjct:   44 RPPP--SPRMTWIEKSATVTVEAPRDFCYTIFSDLEAQPKWSPWLKSVQVDPVDPDLSRWSLASRGVEVSWQARNTSVIRPEVIAWESLDGLPNKGAVTFVDAAAAPALSPXXXXXXXXTAAGRAQRPVTEVTLAISFDVPAFIAAVLKSDAVGQYVEQTLLADLKRYRAVVL 214          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A5J4Z354 (Polyketide_cyc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z354_PORPP)

HSP 1 Score: 147 bits (372), Expect = 2.430e-41
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVEN-TNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVALLNRRK 189
            W+E  A + VE      +  Y +LEAMP+WSPWL+ V VD+ D  +S W LA++GI++SW+ARN  V   EII W+S TGLSNRG+V F   ++  +  +TL V F++PG +A +  +DFVG +VE TLLADL+RFR +AL   RK
Sbjct:   41 WLETHARLKVEAPREFVFSRYSNLEAMPQWSPWLEKVVVDEQDPTLSTWKLAARGISVSWRARNVRVEEPEIIQWESVTGLSNRGKVTFADADDGASTNMTLTVSFNVPGFIAALMKSDFVGNYVERTLLADLERFRVIALRELRK 186          
BLAST of Ggra6088.t1 vs. uniprot
Match: M2VTJ6 (Cyclase/dehydrase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTJ6_GALSU)

HSP 1 Score: 131 bits (330), Expect = 6.120e-35
Identity = 62/140 (44.29%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVAL 184
            W+  +  + V++    A+D Y DLE MP WSPWL+SV+VD    +++ W L+++G+++SW++RNT V    IIAW+S  GL NRG V F+   +   ++ L VE+ +P  +  +  N FVG+FVE TLL DLKRFR  AL
Sbjct:   58 WLGHTVKLDVQVPSWLAFDLYSDLEKMPSWSPWLRSVQVDPKQPEIATWNLSARGLSVSWRSRNTRVERPHIIAWESLEGLPNRGSVQFQEKGDNCTQVELTVEYKVPRFLKVLLSNSFVGKFVERTLLEDLKRFRLCAL 197          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A1D8TN04 (Polyketide_cyc domain-containing protein n=26 Tax=Moorena TaxID=1155738 RepID=A0A1D8TN04_9CYAN)

HSP 1 Score: 125 bits (315), Expect = 1.840e-33
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVAL 184
            W+E S  V VE+    A+D + DLE MP+W  W+ SVEV K D D+SRW LAS G   SW +R   + P +II W+S  GL NRG V F    N +  + L + +D+PG + ++ DN F+G  VE T+ ADL+RFR  AL
Sbjct:    4 WLEHSVQVEVEVPIELAWDLWSDLEQMPRWMKWIDSVEVLKEDPDLSRWKLASTGFEFSWLSRIVKLVPHQIIQWESVDGLPNRGAVRFYD-RNGSSIVKLTIAYDIPGIIGQLMDNLFLGNIVESTIQADLERFRDYAL 142          
BLAST of Ggra6088.t1 vs. uniprot
Match: Q31N28 (Polyketide_cyc domain-containing protein n=3 Tax=Synechococcus elongatus TaxID=32046 RepID=Q31N28_SYNE7)

HSP 1 Score: 119 bits (297), Expect = 9.140e-31
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVA 183
            W+E S  V V +    A++ + DLE MP+W  W+ SV+V K+D ++SRW LASQG   SW +R T + P ++I W+S  GL NRG + F   ++ +  + L++ + +PG +  + D  F+GR VE TL ADL RFR  A
Sbjct:    4 WLEHSVQVEVAVPVARAWELWSDLEQMPRWMKWIDSVQVQKDDPELSRWKLASQGFEFSWLSRITRLVPQQLIQWESVDGLPNRGAIRFYDRQDHSI-VRLSISYAIPGGLGPLMDKLFLGRIVEGTLKADLDRFRHYA 141          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A2G4F4X2 (Polyketide_cyc domain-containing protein n=10 Tax=Cyanobacteria TaxID=1117 RepID=A0A2G4F4X2_9CYAN)

HSP 1 Score: 119 bits (297), Expect = 9.960e-31
Identity = 58/140 (41.43%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVAL 184
            W+E S  V VE+    A+  + DLE +P+W  W++SV++ +++ ++SRW LA+ G+  SW +R   + P +I+ W+S  GL NRG V F   +N++  + L V + +PG +A++ DN FVGR VE TL ADL+RF+  AL
Sbjct:    4 WLEHSVQVEVEIPIELAWKLWSDLEQLPRWMKWIESVQILEDNPELSRWKLATGGLEFSWLSRIIKLVPNQIMQWESVDGLPNRGAVRFYDRKNSSI-VKLTVAYGIPGWLAKLMDNSFVGRVVESTLQADLERFKEYAL 142          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A563VYR9 (Polyketide cyclase / dehydrase family protein n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VYR9_9CYAN)

HSP 1 Score: 115 bits (288), Expect = 2.120e-29
Identity = 55/140 (39.29%), Postives = 87/140 (62.14%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVAL 184
            W+E +  V V +   + +  + DLE MP+W  W+ SVE+ K++ ++SRW LAS     +W +R   + P +II W+S  GL N+G + F G  N++  + L+V + +PG + +I DN F+GR VE T+ AD++RFR  AL
Sbjct:    4 WLEHTVQVEVAVPIEQVWSLWSDLEQMPRWMKWIDSVEILKDNPELSRWKLASGAFKFTWLSRIVNLVPEQIIQWESVDGLPNKGAIRFYGRHNSSI-VKLSVAYSIPGILGKIMDNLFLGRIVESTIQADMERFREYAL 142          
BLAST of Ggra6088.t1 vs. uniprot
Match: A0A2T1C813 (Polyketide_cyc domain-containing protein n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C813_9CYAN)

HSP 1 Score: 114 bits (286), Expect = 5.160e-29
Identity = 59/145 (40.69%), Postives = 85/145 (58.62%), Query Frame = 0
Query:   45 WVERSATVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGITISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFDLPGAVARIFDNDFVGRFVEDTLLADLKRFRAVALLNRRK 189
            W+E +  V VE+     +  + DLE MP W  W+KSV++   + ++SRW LAS     SW +R   + P +II W+S  GL NRG + F    +T+  + L V + +PG + +I DN F+GR VE T+ ADL RFR  ALL + K
Sbjct:    4 WLEHTVQVEVEVPIDFVWSLWSDLEQMPMWMKWIKSVQILPENPELSRWKLASGAFEFSWLSRIVKIIPHQIIQWESVDGLPNRGAIRFYD-RHTSSIVKLTVSYAIPGILGQIMDNLFLGRIVESTIQADLNRFRDYALLAKAK 147          
The following BLAST results are available for this feature:
BLAST of Ggra6088.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6823.190e-6862.65Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
A0A7S1EQM79.460e-4851.32Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NW242.200e-4246.24Polyketide_cyc domain-containing protein n=1 Tax=P... [more]
A0A5J4Z3542.430e-4149.32Polyketide_cyc domain-containing protein n=1 Tax=P... [more]
M2VTJ66.120e-3544.29Cyclase/dehydrase n=1 Tax=Galdieria sulphuraria Ta... [more]
A0A1D8TN041.840e-3345.71Polyketide_cyc domain-containing protein n=26 Tax=... [more]
Q31N289.140e-3141.73Polyketide_cyc domain-containing protein n=3 Tax=S... [more]
A0A2G4F4X29.960e-3141.43Polyketide_cyc domain-containing protein n=10 Tax=... [more]
A0A563VYR92.120e-2939.29Polyketide cyclase / dehydrase family protein n=1 ... [more]
A0A2T1C8135.160e-2940.69Polyketide_cyc domain-containing protein n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 46..185
e-value: 5.2E-31
score: 109.4
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 56..169
e-value: 3.4E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR33824POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 25..184
NoneNo IPR availablePANTHERPTHR33824:SF7POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 25..184
NoneNo IPR availableCDDcd07817SRPBCC_8coord: 45..183
e-value: 7.17039E-33
score: 113.083
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 49..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:517499..518297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6088.t1Ggra6088.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 517499..518297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6088.t1 ID=Ggra6088.t1|Name=Ggra6088.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
MSYTFVPAVAFPNLRSQSSLPLKARRTIRTTAAKPPARITPTCVWVERSA
TVLVEMAPTEAYDYYIDLEAMPKWSPWLKSVEVDKNDGDVSRWTLASQGI
TISWQARNTLVRPGEIIAWKSETGLSNRGRVLFRGVENTNCKLTLAVEFD
LPGAVARIFDNDFVGRFVEDTLLADLKRFRAVALLNRRKRLRSTEVSTSN
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR005031COQ10_START