Ggra6082.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6082.t1
Unique NameGgra6082.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length340
Homology
BLAST of Ggra6082.t1 vs. uniprot
Match: A0A2V3J359 (Putative dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J359_9FLOR)

HSP 1 Score: 434 bits (1115), Expect = 7.300e-150
Identity = 213/334 (63.77%), Postives = 264/334 (79.04%), Query Frame = 0
Query:    6 SKRVLLFTAFVLSLQNAFAAETKSLSQLRSMKGSSPSGLIKLSIDKFQDFVESSSRPYSLFVLFSADSQLCAPCGAITQRLSRVASDYYSLPSSKASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQSPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPFILLTAAVLAAGIVATGAYKNPMLWFGIVALIYIFSVGGGHYSWINNTPLAAVNMNGEMEYISGGSRSQYVAEGFFVSATCVSISILVILIQELPSIIPNKQGQTAVGMALVAMTGIAITILVALYQMKMPQYLRYNYLS 339
            SKR+LL   F+ S ++   +++K L+QL   +  SPSGLI  +I++FQD VE++ R YSLFV+FSADS LC PC +  + +  +A +YY+LPSSK+SSKPVFFAVV + T DQEFL+RYGLRHVPVFYHF    S+ YP+ L ++S DN+PVQ  G G N ++EFIN+RCGSRLR+VRGNY IPFV+TV+ FKPFIL     +AA +V TGAYK+PMLWF +V LIYIFSVGGGHYSWI+N+PLA VN +G  EYI+GGSRSQYVAEGFFVSATCVSISILVIL+QELPS+IPNK GQTA G+  + +T +AIT L+ LY  KMPQYL+YN LS
Sbjct:    4 SKRILLCFLFICSFKHGAGSDSKRLAQLERRRDRSPSGLIPFNIEEFQDVVEAAPRSYSLFVMFSADSSLCQPCASTKRIIGMIAKEYYALPSSKSSSKPVFFAVVNVKTTDQEFLIRYGLRHVPVFYHFGRSKSKTYPKQLDERSADNYPVQ-AGLGANTLREFINSRCGSRLRVVRGNYQIPFVETVRMFKPFILFGVLAIAAVVVFTGAYKSPMLWFAVVMLIYIFSVGGGHYSWIHNSPLAVVNQHGVTEYIAGGSRSQYVAEGFFVSATCVSISILVILVQELPSVIPNKHGQTAAGLFFLFLTSVAITFLLTLYHSKMPQYLQYNELS 336          
BLAST of Ggra6082.t1 vs. uniprot
Match: R7QTT2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTT2_CHOCR)

HSP 1 Score: 328 bits (841), Expect = 3.280e-108
Identity = 161/313 (51.44%), Postives = 222/313 (70.93%), Query Frame = 0
Query:   24 AAETKSLSQLRSMKGSSPSGLIKLSIDKFQDFVESSSRPYSLFVLFSADSQLCAPCGAITQRLSRVASDYYSLPSSKASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQSPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPFILLTAAVLAAGIVATGAYKNPMLWFGIVALIYIFSVGGGHYSWINNTPLAAVNMNGEMEYISGGSRSQYVAEGFFVSATCVSISILVILIQELPSIIPNKQGQTAVGMALVAMTGIAITILVALYQMKMPQYLRYN 336
            A  + SLSQL+++K SS S ++ LSI +F+ +VE + R Y+L V+F+AD+ +C PC  +   + ++A +Y  LP  K S  PVFFA ++++  DQ FL +Y ++HVP+ Y FRAGN+R +P  L D SPDN+ +Q+ G   N +K F+NAR  S L +VR    IPFV  V+   P IL+         VA+GAYK PM+WFG+V L+YIFSVGGG +SWI+N PLA V+ NG  +Y + GSRSQYV EGFFVS TCVSIS+LVILIQELP ++P K GQ+A+G++++ MT +AI  L++LYQ+KMPQYLRY+
Sbjct:   28 AGSSASLSQLQTLKRSSHSQVLSLSIGEFEKYVERAPREYTLIVMFTADASMCKPCAPMLLAIEKIAKEYEELPDRKKSRMPVFFASLKVSPNDQAFLAKYSMQHVPILYAFRAGNTRNFPSPLNDNSPDNYQIQQFGILPNQMKNFVNARTSSSLSVVRSG-QIPFVPYVRAVMPIILVFVGFAVFVGVASGAYKRPMVWFGLVMLVYIFSVGGGFFSWIHNQPLAVVDSNGITQYFAEGSRSQYVGEGFFVSVTCVSISVLVILIQELPWVLPYKSGQSAIGLSMIMMTFVAIVALLSLYQIKMPQYLRYS 339          
BLAST of Ggra6082.t1 vs. uniprot
Match: A0A2L2Y1A0 (Tumor suppressor candidate 3 n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y1A0_PARTP)

HSP 1 Score: 78.2 bits (191), Expect = 8.210e-13
Identity = 74/297 (24.92%), Postives = 131/297 (44.11%), Query Frame = 0
Query:   39 SSPSGLIKLSIDKFQDFVESSSRPYSLFVLFSADS--QLCAPCGAITQRLSRVASDYYSLPSSKASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQSPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPFILLTAAVLAAGIVATGAYKNPMLWFGIVALIYIFSVGGGH-YSWINNTPLAAVNMNGEMEYISGGSRSQYVAEGFFVSATCVSISILVILIQELPSIIPNKQGQTAVGMALVAMTGIAITILVALYQMKMPQY 332
            SS   +I+L+ DKF+ F++++ R YS  V+ +A S  + C  C    +    VA+ +     S A +  +FF +V   T    F    G+   PVF HF        P     +  D   +Q +G+    I  +I  R   ++R+ R   +   +  V  F     L AA+L           N   W G+ AL  +F++  G  ++ I   P       G + YI   S  Q++ E + V     +I I ++L+QE  S   + + +  + +  +A+  I  ++L+++++MK   Y
Sbjct:    2 SSKRAIIRLTGDKFRQFIKATPRNYSFIVMLTALSPHRQCVVCRHAHEEFQLVATSWRF---SNAVNNKLFFGMVDFDTGPDVFTSL-GMNSAPVFMHF--------PEKGKPKKGDQMDIQRIGFQAETIARWIAERTDIQIRVFRPPNYSGTIALVILFA----LIAALLYMRRNNLDFLYNKTSW-GLGALCIVFAMTSGQMWNHIRGPPFMHRTSKGTVGYIHASSGGQFIVETYIVIVLNAAIVIGMVLLQEAASCRGDSKKRKIMSVTGLAVVAIFFSLLLSVFRMKAQGY 281          
BLAST of Ggra6082.t1 vs. uniprot
Match: A0A158Q2R9 (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A158Q2R9_DRAME)

HSP 1 Score: 72.0 bits (175), Expect = 1.690e-10
Identity = 69/256 (26.95%), Postives = 118/256 (46.09%), Query Frame = 0
Query:   44 LIKLSIDKFQDFVESSSRPYSLFVLFSADSQLCAPCGAITQRLSRVASDY-YSLPSSKASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQSPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPFILLTAAVLAAGIVATGAYKNPMLW----FGIVALIYIFS-VGGGHYSWINNTPLAAVNMNG-EMEYISGGSRSQYVAEGFFVSATCVSISILVILIQE 292
            +I +++D++  FV SS R YS+ V+F+A S  CA C    +    VA+ Y Y+ P  KA    ++FAVV      Q F  +  L  VP   HF A  +++          D    Q  G G +++  FI  R  + +++V   Y I  +Q      P ++L  A+L  G++         L+    +  V+L  +F+ + G  ++ I   P    N +  E  ++   ++ Q VAE + V+    +IS   IL+ +
Sbjct:   49 IINMNMDRWNTFVRSSPRNYSMVVMFTALSIGCAVCKPAFEEFHIVANSYRYAYPELKA----LYFAVVDYEDAPQIF-SQLKLMTVPAILHFPAKGAKK--------KIDEMDFQRQGLGADSMARFIKDR--TDIQVVLFLYIIRILQPPNYAAPAVVLLLAMLVLGLLYMRRNNLEFLYNRTSWAFVSLCIVFAFMSGQMWNHIRGPPFVMTNPSTRETSFVHRSTQYQLVAETYLVALLYGAISAGFILLND 289          
BLAST of Ggra6082.t1 vs. uniprot
Match: tumor suppressor candidate 3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EAF9DA0 (tumor suppressor candidate 3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EAF9DA0)

HSP 1 Score: 62.4 bits (150), Expect = 2.690e-7
Identity = 75/296 (25.34%), Postives = 130/296 (43.92%), Query Frame = 0
Query:   44 LIKLSIDKFQDFVESSSRPYSLFVLFSA--DSQLCAPCGAITQRLSRVASDYYSLPSSKASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQSPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPFILLTAAVLAAGIVATGAYKNPMLWFGIVALIYIFSVGGGH-YSWINNTPLAAVNMN-GEMEYISGGSRSQYVAEGFFVSATCVSISILVILIQELPSII--PNKQGQTA-VGMALVAMTGIAITILVALYQMKMPQY 332
            +I+L+ DKF+ +V+++ R YS+ V+ +A    + C+ C    +  + +A+ +     S+  S  +FFA+V        F     L   PVF HF        P     +  D+  +  VG+    I  ++  R   ++R+ R   +   +     F     L   +L           N   W GI AL  IF++  G  ++ I   PL   N + G M YI G S+ Q++ E + V     ++    IL+ E  S+   P K+   A VG+  VA   I  ++L+++++ K   Y
Sbjct:   47 VIRLTGDKFRQYVKTAPRNYSMIVMLTALQAQRQCSVCRQANEEYTILANSWRY---SQQFSNKLFFALVDYDEGPDVF-QNLKLNTAPVFMHF--------PPKGKPKKGDSLDINRVGFAAEQIARWVGERTDIQIRVFRPPNYSGTLALALLFS----LIGGLLYLKRNNLEFLYNKTSW-GIGALAVIFAMTSGQMWNHIRGPPLMHRNPHTGAMHYIHGSSQGQFIMETYIVMLLNTAVVFGFILMNEAHSLKGDPGKKRILALVGLGCVA---IFFSLLLSVFRSKYQGY 322          
The following BLAST results are available for this feature:
BLAST of Ggra6082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J3597.300e-15063.77Putative dolichyl-diphosphooligosaccharide--protei... [more]
R7QTT23.280e-10851.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2L2Y1A08.210e-1324.92Tumor suppressor candidate 3 n=2 Tax=Parasteatoda ... [more]
A0A158Q2R91.690e-1026.95Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
tumor suppressor candidate 3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EAF9DA02.690e-725.34tumor suppressor candidate 3-like n=2 Tax=Haliotis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 32..332
e-value: 1.2E-46
score: 159.4
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PANTHERPTHR12692DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATEDcoord: 9..330
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 23..205
e-value: 6.4E-18
score: 67.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 245..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 326..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 305..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..293
NoneNo IPR availableTMHMMTMhelixcoord: 199..218
NoneNo IPR availableTMHMMTMhelixcoord: 269..291
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 306..325
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 36..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:503097..504199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6082.t1Ggra6082.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 503097..504199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6082.t1 ID=Ggra6082.t1|Name=Ggra6082.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=340bp
MKTIYSKRVLLFTAFVLSLQNAFAAETKSLSQLRSMKGSSPSGLIKLSID
KFQDFVESSSRPYSLFVLFSADSQLCAPCGAITQRLSRVASDYYSLPSSK
ASSKPVFFAVVRITTRDQEFLMRYGLRHVPVFYHFRAGNSREYPRHLTDQ
SPDNFPVQEVGYGLNAIKEFINARCGSRLRIVRGNYHIPFVQTVKDFKPF
ILLTAAVLAAGIVATGAYKNPMLWFGIVALIYIFSVGGGHYSWINNTPLA
AVNMNGEMEYISGGSRSQYVAEGFFVSATCVSISILVILIQELPSIIPNK
QGQTAVGMALVAMTGIAITILVALYQMKMPQYLRYNYLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6
IPR036249Thioredoxin-like_sf