Ggra6064.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6064.t1
Unique NameGgra6064.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Homology
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BLAST of Ggra6064.t1 vs. uniprot
Match: A0A2V3IZE2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZE2_9FLOR)

HSP 1 Score: 110 bits (274), Expect = 7.110e-27
Identity = 70/156 (44.87%), Postives = 94/156 (60.26%), Query Frame = 0 
Query:    1 MPPRPPLTSLVIHTWKEHGKPKPFTSQANSAQAAKARISRSISHDALLARGLNHNDNRPSNCSLAVARSISYEEGLTTTSTILARDA--PVSQQERGTTNDQNVNSSISTASITDPALVDFSPVRAAC-LPTIPELESLTSSASSGINVSRLTSIN 153
            MPPRPP+T+LVIHTWKEHGKP+P ++  NSA AAKARISRSISHDA LAR L  ++      +    RS+S E+GL  +S + A  +  P   +E       N  +S    S T  + +D SP   A  LP+IPE+E+L  S   G ++ +L + N
Sbjct:    1 MPPRPPVTTLVIHTWKEHGKPRPLSNHRNSAAAAKARISRSISHDAHLARRLRTHEENAQKTAQPFMRSVSVEDGLLISSKLTAASSLTPNPIREHAVCKQDNKKTSNKYESPTSLSPIDISPTEHAHPLPSIPEMEALPMSFLKGRSLVQLRASN 156
The following BLAST results are available for this feature:
BLAST of Ggra6064.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZE27.110e-2744.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:449656..450318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6064.t1Ggra6064.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 449656..450318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6064.t1 ID=Ggra6064.t1|Name=Ggra6064.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MPPRPPLTSLVIHTWKEHGKPKPFTSQANSAQAAKARISRSISHDALLAR
GLNHNDNRPSNCSLAVARSISYEEGLTTTSTILARDAPVSQQERGTTNDQ
NVNSSISTASITDPALVDFSPVRAACLPTIPELESLTSSASSGINVSRLT
SINSGSQSGQSSQKKKGKVKLYRSSHSKEKMQSHSRKRTSLIERSCSFDA
DLSTIAETGLEMGSGIAPNL*
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