Ggra6050.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6050.t1
Unique NameGgra6050.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length145
Homology
[Close]
BLAST of Ggra6050.t1 vs. uniprot
Match: A0A2V3IZH7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH7_9FLOR)

HSP 1 Score: 108 bits (271), Expect = 4.600e-28
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 0 
Query:   18 MLAEEQLMLRMGAVRAQRRERRRQIRKEDASLADALNAVSVGTEAKRDAPKIGAPLKKDIEMKSMKVARPRIQKRCKKCQTRHEKIRARMTKRAMSLMNID 118
            M+AEEQ + R    RA+     RQIR+EDA+LADALNAVSVG EAK+DAP IGAPLK D+EM ++KV R RI+K CKKCQ R +KIRARM KRA   M+ID
Sbjct:    1 MMAEEQAVRRKREQRAKXXXXXRQIRQEDATLADALNAVSVGNEAKKDAPTIGAPLKTDVEMSALKVRRSRIRKPCKKCQERLKKIRARMAKRAA--MSID 99
The following BLAST results are available for this feature:
BLAST of Ggra6050.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZH74.600e-2864.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:364952..365453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6050.t1Ggra6050.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 364952..365453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6050.t1 ID=Ggra6050.t1|Name=Ggra6050.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=145bp
MGGRREANQKARSRLLAMLAEEQLMLRMGAVRAQRRERRRQIRKEDASLA
DALNAVSVGTEAKRDAPKIGAPLKKDIEMKSMKVARPRIQKRCKKCQTRH
EKIRARMTKRAMSLMNIDSAPTSAKAAFPTSAPPSSPITSAAPM*
back to top