Ggra6045.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6045.t2
Unique NameGgra6045.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1228
Homology
BLAST of Ggra6045.t2 vs. uniprot
Match: A0A2V3J235 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J235_9FLOR)

HSP 1 Score: 536 bits (1381), Expect = 7.770e-177
Identity = 240/357 (67.23%), Postives = 305/357 (85.43%), Query Frame = 0
Query:  870 SKTYLFTNLHWWESIDHQLTTVATLLALARNTSSIAVVPPFPSKDHSLNSNKSLLGDYFEIAPVKRLQPVITLADFLKSDEYGKLKAEKTGSIPFPKLSQEEYEAHLKVFGHLEVSQIALNMPSIDPENTSQRCDRFGGTIHISADGKTRFVFLDRIHFLHFCTEKFMPWWYTIRHRITPKKSYLDIANRYLAKSTRPVTVIHVNDVLEHQREREGEEIERYARQIVDSLRNNQAISGTLYIISAKHGKNVNKVISLLKEEFEHIHDCAQIYNCLSEVPRDIFFGTLGDTEFHTLFKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLHRKLHGMAYSALRGFSELRKVWAWNLL 1226
            +KTY+ TNLHWWES DHQLTT+ TLL+LA+NTSSIAV+PPFP KD S NSNKSL+GD+F+I  +K++Q  +T ADFLKSDEY +LKAE+TG++P PK SQEEYE  L+ +G L+ + +AL+MP IDPENTSQ+C+RFGGTIH+SADG+TRFVFLDRIHFLHFCTEKFMPWWYTIRHRI P+  + ++A+RY++  T+P +V+H+NDVLE Q+ER  EE+ERYARQIVD+LR +QA+SGTLYI+SAK G NV +V+ LLKEEFE+IHDC  ++NCL+E+PRD+F   L + EF +LFKS+ SLK +EW+LG++A LF+GNI+SPFSRNICL+RK+HG  YS L+GF ELRKVW WNL+
Sbjct:   56 TKTYILTNLHWWESTDHQLTTIITLLSLAQNTSSIAVIPPFPGKDASRNSNKSLIGDFFDITGIKQVQSALTFADFLKSDEYRQLKAEQTGTVPLPKGSQEEYELRLQFYGRLQDTSVALSMPPIDPENTSQKCNRFGGTIHVSADGRTRFVFLDRIHFLHFCTEKFMPWWYTIRHRIEPRAPFFEVADRYMSDKTKPFSVVHLNDVLELQKERGEEEVERYARQIVDALRKHQALSGTLYIVSAKDGNNVKQVVKLLKEEFENIHDCTTVFNCLAEIPRDVFRTVLPENEFDSLFKSESSLKHVEWALGARAQLFVGNIHSPFSRNICLYRKMHGAPYSMLKGFGELRKVWTWNLI 412          
BLAST of Ggra6045.t2 vs. uniprot
Match: A0A1X6PKL0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKL0_PORUM)

HSP 1 Score: 258 bits (660), Expect = 2.470e-73
Identity = 138/367 (37.60%), Postives = 219/367 (59.67%), Query Frame = 0
Query:  886 HQLTTVATLLALAR-NTSSIAVVPPFPSKDHSLNS------NKSLLGDYFEIAPVKRLQPVITLADFLK--SDEYGKLKAEKTGSIPFPKLSQEEYEAHLKVFGHLEVSQIALNMPSIDPENTSQRCDRFGGTIHI--SADGKT---RFVFLDRIHFLHFCTEKFMPWWYTIRHRITPKKSYLDIANRYLAKSTRPVTVIHVNDVLEHQREREGEEIERYARQIVDSLRNNQA-------------ISGTLYIISAKHGKNVNKVISLLKEEFEHIHDCAQIYNCLSEVPRDIFFGTLGDTEFHTLFKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLHRKLHGMAYSALRGFSELRKVWAWNL 1225
            +QLTT+ T LA+A+   +++ V+PP       L S      + +L GDY+++  +K +Q V+TL +FL   S     L     G++  PK SQE+YE  L + G L  ++I++ +P  D E T Q CD   G+++   + DG     + VFLDR+HF HFCTEKF+PWWY +R  + P+  Y    + + A  T P+TVIH+ D+++ QRER+ E+++RYARQ+VD+LR+ Q+              +G+LY+     GKNV +V +L +EEF  ++ C  +Y C + V   +     G ++  +LF+S  +  ++E +L   AD F+GN+YS +SRN+ L RK+HG +YS ++GF E+R++W W L
Sbjct:    4 NQLTTLTTGLAVAKLYPNAVVVLPPAVGVPARLPSPGGAARHITLFGDYYDLPKLKAVQRVMTLDEFLAPGSQTAAGLAMVPPGTLQLPKASQEDYEKSLNLLGDLSDTRISVPLPHEDLERTEQYCDSLPGSVYPVPAGDGGLSAFQLVFLDRLHFFHFCTEKFVPWWYDVRQHLQPRPEYFAAVSAWRATITGPLTVIHLRDLMDGQRERDEEDVQRYARQVVDALRHTQSGGSARPVGVQADLAAGSLYLSYPPSGKNVGRVAALFREEFPRVYTCKDVYECGAGVTATMAGD--GPSDIESLFQSPHAATVMETALSMSADHFVGNVYSSYSRNVGLWRKMHGKSYSIVKGFGEMRRIWTWQL 368          
BLAST of Ggra6045.t2 vs. uniprot
Match: A0A2V3IZD2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZD2_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 1.390e-44
Identity = 117/225 (52.00%), Postives = 145/225 (64.44%), Query Frame = 0
Query:  635 SAIRTKRVLQAAATARRDVSSFVSSFSAPKPPRAXXXXXXXXXXXXXXXXXXXXXXXARRRSLVSPLDDEARARLALLEQQVRDNDAALLALKKQLGRALIRARHARQERDAAAVKLTRLAALLRKQQASLLAERTDAATLLDDVDACVAVFNDALPQHPSPPAPALRSAVEHLVSAAELARVNLSVPIVPFDAADL-DDDDAKSVTSFASSLADDRDAQLDTLI 858
            SA+RT+RVL+AAA+AR+DVSSFV++ ++PKPPRA                       ARRRSLV P+DD  R RL  LEQQ+ + D ALL LKKQLGRALI+ARH +Q+RD +  KL  LAA +RKQ A+LL   T  ATL+D+V AC+ V       H        RSAVE +VSA ELA+  L+ P+      D+ DDDD KSV SFASSL DDRDA +DTL+
Sbjct:   27 SALRTRRVLEAAASARKDVSSFVTNLTSPKPPRAPTSAKN-----------------ARRRSLV-PVDDSFRTRLTELEQQLAERDGALLQLKKQLGRALIKARHVQQQRDTSHAKLAPLAASIRKQHAALLVSHTTCATLVDEVVACIDVMRTECDFHAQ--TNRFRSAVEDVVSALELAKTKLAQPLPTLLHPDVVDDDDTKSVASFASSLGDDRDAHIDTLV 231          
The following BLAST results are available for this feature:
BLAST of Ggra6045.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J2357.770e-17767.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PKL02.470e-7337.60Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IZD21.390e-4452.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1074..1094
NoneNo IPR availableGENE3D3.40.50.11350coord: 1041..1211
e-value: 2.1E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..595
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..83
NoneNo IPR availablePANTHERPTHR48125LP07818P1coord: 53..801

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:353372..361215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6045.t2Ggra6045.t2Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 353372..361215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6045.t2 ID=Ggra6045.t2|Name=Ggra6045.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1228bp
MAPTTTTLRAALRAVDAHATGGSTAAGGSARLPTLPRATPLALRLHVARA
QLVQQHNAALQLAQRRPRPQQQRPRPHDGGAAGAILTRALRAATAAMPLC
AAPPRASVQQLAALAAAHAPATLPAAPLRELRAVAAAGAACIELQLALLL
APQQQPPPLQQQQQAQRVSDALALAYELRRLQTAGDARGDERARGGGGAL
VRVRYLHALHAAAQRDVRRARSALLLADGGEREEQMQHAPSKYLLALLPL
LSGGGGGGGGGGQHDESQQPQLRESERLLRQLGAQSYRNSDCLALLARVA
ARRADYRHAVLQWHAVLARQPSRRAALYSAAAAFNRLCAFDEEQRTLAVL
LALPVQPPPASRPPAAVQLAPRQLCMRRAAEQRVRATVGAGRLALAASLC
DAHAGPLPPAERMFVRVSLGDVRGALALEARGVQDARARARLLAAWSAAE
AHVRRNDAPLANARLRDAARLVVAARRGAAPLCDDVAWRAALFANRAVVH
ARLGALAVADHELAAALAAAAKLAAPPDAAPAPVREWARQRRLAAAFSRA
ALLLWRGDGRDAHSFWRAFCATLPVERLGLGDGDGDGDGRDDHDAAPAAM
GSPSSSPSPPPLPPPPPPPSRARAAAAAAAVSDASAIRTKRVLQAAATAR
RDVSSFVSSFSAPKPPRAPPNAAAAASAAAAAAAAAAARKDARRRSLVSP
LDDEARARLALLEQQVRDNDAALLALKKQLGRALIRARHARQERDAAAVK
LTRLAALLRKQQASLLAERTDAATLLDDVDACVAVFNDALPQHPSPPAPA
LRSAVEHLVSAAELARVNLSVPIVPFDAADLDDDDAKSVTSFASSLADDR
DAQLDTLILPLEAGAGSGVSKTYLFTNLHWWESIDHQLTTVATLLALARN
TSSIAVVPPFPSKDHSLNSNKSLLGDYFEIAPVKRLQPVITLADFLKSDE
YGKLKAEKTGSIPFPKLSQEEYEAHLKVFGHLEVSQIALNMPSIDPENTS
QRCDRFGGTIHISADGKTRFVFLDRIHFLHFCTEKFMPWWYTIRHRITPK
KSYLDIANRYLAKSTRPVTVIHVNDVLEHQREREGEEIERYARQIVDSLR
NNQAISGTLYIISAKHGKNVNKVISLLKEEFEHIHDCAQIYNCLSEVPRD
IFFGTLGDTEFHTLFKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLH
RKLHGMAYSALRGFSELRKVWAWNLLH*
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