Ggra6039.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6039.t1
Unique NameGgra6039.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
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BLAST of Ggra6039.t1 vs. uniprot
Match: A0A2V3ICZ7 (Apoptotic protease-activating factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ7_9FLOR)

HSP 1 Score: 60.8 bits (146), Expect = 8.720e-8
Identity = 42/121 (34.71%), Postives = 63/121 (52.07%), Query Frame = 0 
Query:   30 NEPDEPEGRSTISIEANHVEDGGATGFQDKKTDRTEFLCFKTEKDEAEAIEDYKTDGSELGNTEDLQAEDNELEIRGLAWSANKNLIGTSSLSTGTCVWQMSSKEYQQPKLRRSFMIDKRL 150
            NE DE E R T   E    ED    GF+ ++ + ++           E+ E+Y      +  TE  Q ++++L+I  LAWS ++ LI TSSLS GT VW ++S E     LRR+ +  +RL
Sbjct: 1102 NECDEAELRGTTESEEISAEDSEGNGFKSERREESDKNLLGDLFGFTESDENY------VEETESRQIKNDDLKITSLAWSYDRRLIATSSLSKGTRVWALNSTEEPHVILRRALINGQRL 1216
The following BLAST results are available for this feature:
BLAST of Ggra6039.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICZ78.720e-834.71Apoptotic protease-activating factor 1 n=1 Tax=Gra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:192387..193621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6039.t1Ggra6039.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 192387..193621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6039.t1 ID=Ggra6039.t1|Name=Ggra6039.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MIVGEEEAYDGSDSESVTSIESSSEFWSDNEPDEPEGRSTISIEANHVED
GGATGFQDKKTDRTEFLCFKTEKDEAEAIEDYKTDGSELGNTEDLQAEDN
ELEIRGLAWSANKNLIGTSSLSTGTCVWQMSSKEYQQPKLRRSFMIDKRL
VSEWIFFGCVR*
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