Ggra6032.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6032.t1
Unique NameGgra6032.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Homology
BLAST of Ggra6032.t1 vs. uniprot
Match: R7QTF7 (3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTF7_CHOCR)

HSP 1 Score: 285 bits (730), Expect = 3.690e-95
Identity = 150/227 (66.08%), Postives = 167/227 (73.57%), Query Frame = 0
Query:   31 MLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV--------VSRKTS--------------------------ILPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLMS 208
            MLLE+GFRVVIHDSDEQAL++LLT LG LVNE QCYPICFD CN+DS+ +AM+RI +DF PV        +  KT+                          +LP+               + +TGGHTTGIAYSTTKGALQTFTFALARECAK+GITVNGIAPAYIRTPGVEAYPK+MVKMLLEYIPVGRFCEP EFAHTVKFLISPL+GFICGEIIDQNGGLLMS
Sbjct:    1 MLLEDGFRVVIHDSDEQALTDLLTDLGSLVNEHQCYPICFDPCNADSVAQAMQRIADDFPPVYVLVNNSGILSKTASAGMSIEEWRNCFSQNVDSAFLISRALLPNMKKRKWGRIVNTCSIAGKTGGHTTGIAYSTTKGALQTFTFALARECAKEGITVNGIAPAYIRTPGVEAYPKEMVKMLLEYIPVGRFCEPAEFAHTVKFLISPLSGFICGEIIDQNGGLLMS 227          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A7S0XJV5 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJV5_9RHOD)

HSP 1 Score: 258 bits (658), Expect = 8.240e-84
Identity = 139/252 (55.16%), Postives = 167/252 (66.27%), Query Frame = 0
Query:    6 RSYEPDMKTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV-------------VSRKTSI---------------------LPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLMS 208
            R  + D+KTA+VTG++GVLGQATVRMLLEEGFRVV+HDS   AL++ ++ LG L      YPICFD  N++S+  A +RI+ DF PV             ++ +TSI                     LP                + +TGG TTGI Y+++KGA+ T TFALARE AKDG+TVNGIAPAYIRTP VE YP +MV MLL+YIPVGRFCEPEEFAHTV+FLISPLAGFI GEIID NGGLLMS
Sbjct:    4 RDLDADLKTALVTGASGVLGQATVRMLLEEGFRVVVHDSSVDALNDFVSKLGSLATRENIYPICFDPTNAESVSTACQRISRDFAPVYVLINNCGVLSNTLAAETSIEDWRNIFAQNVDSAFLMSRELLPPMKERKWGRIINTCSLAGKTGGVTTGIGYASSKGAVHTMTFALARESAKDGVTVNGIAPAYIRTPTVELYPDEMVDMLLKYIPVGRFCEPEEFAHTVRFLISPLAGFITGEIIDMNGGLLMS 255          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A1X6NSY2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSY2_PORUM)

HSP 1 Score: 258 bits (660), Expect = 6.780e-81
Identity = 141/256 (55.08%), Postives = 164/256 (64.06%), Query Frame = 0
Query:    2 SSFMRSYEPDMKTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV-------------VSRKTSI---------------------LPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLMS 208
            + F+R YEPD+KTAMVTG++GVLG A  RMLL E FRVVIHDS   AL++ +  LG       CYPICFD  NS+++  A+ RI  D  PV             +  +TSI                     LP+               + +TGG TTG+AYSTTKGALQT TFALARE AKDGITVNGIAPAYIRTP VE YP+D+V MLL YIPV RFCEPEEFAH V+FLISP++GFI GEIIDQNGGL MS
Sbjct:  251 AQFLREYEPDLKTAMVTGASGVLGMAVTRMLLSENFRVVIHDSSVDALNDFVAELGSAAKRDVCYPICFDPSNSEAVAAAVARIDADAWPVYVLINNSGILSNTLVEETSIDEWRNVFAQNVDSAFLLSRALLPAMRKRKWGRIVNTCSLAGKTGGVTTGVAYSTTKGALQTLTFALARESAKDGITVNGIAPAYIRTPTVETYPEDVVDMLLRYIPVSRFCEPEEFAHVVRFLISPMSGFITGEIIDQNGGLHMS 506          
BLAST of Ggra6032.t1 vs. uniprot
Match: M2VU11 (3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VU11_GALSU)

HSP 1 Score: 241 bits (614), Expect = 4.600e-77
Identity = 130/253 (51.38%), Postives = 162/253 (64.03%), Query Frame = 0
Query:    6 RSYEPDMKTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV------------------------------------VSRKTSILPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLM 207
            +   P++KTAMVTG+ G+LGQATV+MLL EGFRVVIHD + +AL+  + +LG L + T+CYPICFDA   +S+  A +RI  +F PV                                    VS++  +LP                + +TGG   GIAYST+KGALQT TF LARE A+DGITVN IAPAY+RTP +E YP ++V+ LLE IPVGRFCEPEE+AHTV+FLISPLAGFI GE+ID NGGLLM
Sbjct:    9 KELSPELKTAMVTGATGILGQATVKMLLSEGFRVVIHDVNVEALNTFVDSLGNLASRTKCYPICFDASKPESVLEACKRIGEEFGPVYVLINNNGFLSNTGVLDTTPKEWRRIFAQNVDSAFLVSKE--LLPHMKSKKFGRIINTCSLAGKTGGVNAGIAYSTSKGALQTLTFGLARESARDGITVNAIAPAYLRTPTLEHYPPEIVERLLETIPVGRFCEPEEYAHTVRFLISPLAGFITGEVIDMNGGLLM 259          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A2V3IZ51 (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ51_9FLOR)

HSP 1 Score: 213 bits (542), Expect = 2.410e-66
Identity = 100/106 (94.34%), Postives = 105/106 (99.06%), Query Frame = 0
Query:  103 SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLMS 208
            + +TGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGV+AYPK+MVKMLLEYIPVGRFCEPEEFAHT+KFLISPLAGFICGEIIDQNGGLLMS
Sbjct:  141 AGKTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVDAYPKEMVKMLLEYIPVGRFCEPEEFAHTIKFLISPLAGFICGEIIDQNGGLLMS 246          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A7J7IM80 (Peptide transporter ptr1 n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7J7IM80_9RHOD)

HSP 1 Score: 210 bits (535), Expect = 1.230e-64
Identity = 115/250 (46.00%), Postives = 144/250 (57.60%), Query Frame = 0
Query:    6 RSYEPDMKTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDF----------------------------------HPVVSRKTSILPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLL 206
            RS  P+++  MVTG+ GVLGQATVR  L+EGFRVV+HD+  + L+ L+  LGP       YPICFD    +++  AM RI  DF                                  H        +LP+               + +TGG TTGIAYSTTKGALQT TF+LARE A+DG+TVNGI+ AY++T  +E +PK++V  LL  IPVGRF  PEEFA  V FL SP+AGFI GEI+D NGGLL
Sbjct:   44 RSLAPELRVVMVTGATGVLGQATVRAFLDEGFRVVVHDNSVEDLNALVAQLGPSATAEALYPICFDISRPEAVAAAMHRIQQDFGHIYFLINNNAVVSATHALDTSPEDWQYAFAQNVHSAFYMSREVLPAMRAKRFGRIINTCSLAGKTGGITTGIAYSTTKGALQTLTFSLARETARDGVTVNGISYAYVQTATLERFPKEVVDQLLSSIPVGRFMRPEEFAFAVLFLSSPMAGFITGEIVDLNGGLL 293          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A7S0ZDE4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDE4_9RHOD)

HSP 1 Score: 177 bits (448), Expect = 1.010e-52
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0
Query:  103 SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLMS 208
            + +TGG TTGI Y+++KGA+ T TFALARE AKDG+TVNGIAPAYIRTP VE YP +MV MLL+YIPVGRFCEPEEFAHTV+FLISPLAGFI GEIID NGGLLMS
Sbjct:   96 AGKTGGVTTGIGYASSKGAVHTMTFALARESAKDGVTVNGIAPAYIRTPTVELYPDEMVDMLLKYIPVGRFCEPEEFAHTVRFLISPLAGFITGEIIDMNGGLLMS 201          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A5J4Z061 (3-oxoacyl-acyl-carrier-protein reductase FabG n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z061_PORPP)

HSP 1 Score: 169 bits (427), Expect = 7.410e-49
Identity = 78/105 (74.29%), Postives = 91/105 (86.67%), Query Frame = 0
Query:  103 SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLM 207
            + +TGG TTGI Y+ +KGA+ T TFALARE AKDG+TVNGIAPAYIRTP VE YP++MV MLL+YIPVGRFCEPEEF+H VKFL+SPLAGFI G I+D NGGLL+
Sbjct:  150 AGKTGGVTTGIGYAASKGAVHTMTFALARESAKDGVTVNGIAPAYIRTPTVELYPEEMVSMLLKYIPVGRFCEPEEFSHAVKFLVSPLAGFITGSILDLNGGLLV 254          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A7X0PHG8 (3-oxoacyl-[acyl-carrier protein] reductase n=2 Tax=Acidovorax TaxID=12916 RepID=A0A7X0PHG8_9BURK)

HSP 1 Score: 161 bits (408), Expect = 4.390e-46
Identity = 98/245 (40.00%), Postives = 135/245 (55.10%), Query Frame = 0
Query:   13 KTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV-------------VSRKTS---------------------ILPS---------------SSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGV-EAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLM 207
            K A+VTG+AG +G A V++LLE+G +V + D + Q  ++L TALGP     +  P  FD  + ++++     I     PV              +  TS                     ++PS               +++TGG T G AYS +KGA+ + TF+LARE A  G+T NGI+PAY++TP + E   ++  + LL  IPVGRFCEPEEFAH V+FL SPLAGFI GEI+D NGGLLM
Sbjct:    8 KVAIVTGAAGTMGLAAVKVLLEDGCQVALVDVNGQRTADLATALGP-----RAQPFAFDISDPEAVQAGHAAIVRALGPVDILLNNAGVLSNNKAEATSPVEWRQVLGANLDGAFYLAQCVVPSMKARRFGRLINTCSLAAKTGGLTAGTAYSVSKGAMTSLTFSLARELAPFGVTANGISPAYVKTPMITEQLNEEQRQKLLRDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIVDLNGGLLM 247          
BLAST of Ggra6032.t1 vs. uniprot
Match: A0A2S7J9A6 (3-oxoacyl-ACP reductase n=1 Tax=Rhodoferax sp. TS-BS-61-7 TaxID=2094194 RepID=A0A2S7J9A6_9BURK)

HSP 1 Score: 151 bits (381), Expect = 5.430e-42
Identity = 96/245 (39.18%), Postives = 125/245 (51.02%), Query Frame = 0
Query:   13 KTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALSELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPV----------------------------------------------VSRKTSILPSSS---RTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRTPGV-EAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIIDQNGGLLM 207
            K A+VTG+AG +G A VR+LLE+G +V + D +      L   LGP           FD  ++++++    RI      V                                                R   I+ +SS   +TGG T G AYS +KGA+   TF+LARE A  G+T N IAPAY++TP + E   ++  + LL+ IPVGRFCEPEEFAH V+FL SPLAGFI GEIID NGGLLM
Sbjct:   11 KVALVTGAAGTMGLAAVRVLLEDGCKVALVDFNHARNKALADELGP-----NAAAFSFDISDAEAVQEGHARIVQTLGTVDILVNNAGILSNNKVEATDAQEWRRVMGANLDGAFYLSQQVVPAMKAQRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELASFGVTANAIAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDINGGLLM 250          
The following BLAST results are available for this feature:
BLAST of Ggra6032.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QTF73.690e-9566.083-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax... [more]
A0A7S0XJV58.240e-8455.16Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1X6NSY26.780e-8155.08Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2VU114.600e-7751.383-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax... [more]
A0A2V3IZ512.410e-6694.343-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A7J7IM801.230e-6446.00Peptide transporter ptr1 n=3 Tax=cellular organism... [more]
A0A7S0ZDE41.010e-5279.25Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z0617.410e-4974.293-oxoacyl-acyl-carrier-protein reductase FabG n=1 ... [more]
A0A7X0PHG84.390e-4640.003-oxoacyl-[acyl-carrier protein] reductase n=2 Tax... [more]
A0A2S7J9A65.430e-4239.183-oxoacyl-ACP reductase n=1 Tax=Rhodoferax sp. TS-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 136..153
score: 40.16
coord: 169..189
score: 36.96
coord: 115..134
score: 36.5
coord: 14..31
score: 36.18
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 13..92
e-value: 3.0E-9
score: 36.6
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 103..205
e-value: 1.1E-20
score: 74.3
NoneNo IPR availableGENE3D3.40.50.720coord: 92..208
e-value: 5.0E-27
score: 96.8
NoneNo IPR availableGENE3D3.40.50.720coord: 11..91
e-value: 1.6E-13
score: 52.5
NoneNo IPR availablePANTHERPTHR24321DEHYDROGENASES, SHORT CHAINcoord: 13..91
coord: 97..207
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 102..130
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 12..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:177923..178841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6032.t1Ggra6032.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 177923..178841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6032.t1 ID=Ggra6032.t1|Name=Ggra6032.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MSSFMRSYEPDMKTAMVTGSAGVLGQATVRMLLEEGFRVVIHDSDEQALS
ELLTALGPLVNETQCYPICFDACNSDSIERAMERITNDFHPVVSRKTSIL
PSSSRTGGHTTGIAYSTTKGALQTFTFALARECAKDGITVNGIAPAYIRT
PGVEAYPKDMVKMLLEYIPVGRFCEPEEFAHTVKFLISPLAGFICGEIID
QNGGLLMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf