Ggra602.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra602.t1 vs. uniprot
Match: A0A2V3IVQ1 (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ1_9FLOR) HSP 1 Score: 545 bits (1404), Expect = 4.390e-186 Identity = 310/530 (58.49%), Postives = 363/530 (68.49%), Query Frame = 0
Query: 42 AMXXXXXXLPVATAIIITAPEACGGSRVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGAYVRLMSRVGRKHVHTLRSAAKSLFVGMVFGRVPDAVLLSDAPP--QIPLLETAAISVRARTTSDAWKNDPQKPAPTVGPTESPVPSSHTRQVLQSAPSY-EFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCWNETNIIFTSEGEAQGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXX------------------------PAPSSSVMDHH--AERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMLIS 542
AM LPV AI++ APE+CGG RV+KH+ A FG D A N + +F PR QRDGAY+R+ + TL SAA SLF+ M+FGR PD + ++D PP QI LLE +A+S R R + W ++P P +V P T+ +L++ S+ + A+A R + SPSLDPS L+DACCQLSV+ADLQA++G VAVV RGVCDFAQK+ MQDAGA GVIVVNFKDEGDHLANMKLN++K +P I IPAVMIRYRDWA IAPCWN+T + FT++GEA+GD+ D LNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETY H + S EE LL+DTSEPE XXXXXXXXXXXX PAPS+ ++ N ++ Q G S AP S T P E ESEEEEPICAVCLEEFE GQQVR LACSHLYHR+CIDPWLQSSSNSCPLCKREIP+LPPPP Q HYGSML+S
Sbjct: 108 AMLLLLLALPVVAAILVKAPESCGGERVIKHANALFGLKPDDPAFNNRDFAIFAPRPQRDGAYIRINPVSRPSAISTLHSAATSLFIAMLFGRAPDTIRVTDPPPPPQISLLEPSALSARVRRANPPWNSNPAAPRASVAPHRQ------TQSLLETIASFGDPSATASRSNTNRPPSPSLDPSPSPLYDACCQLSVTADLQAIQGRVAVVTRGVCDFAQKIGFMQDAGAQGVIVVNFKDEGDHLANMKLNETKQDPHITIPAVMIRYRDWAEIAPCWNDTIVTFTAKGEAKGDHARDNLNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYQHRNHRDQ-SVPEERAHLLSDTSEPETNXXXXXXXXXXXXXXXXXXXXXXXXXVQSIPNKSAAGPAPSTPXXXXGPPTDQPNRTRTESQPGSSSAHAPQLL---SPTRPPEDAESEEEEPICAVCLEEFEPGQQVRQLACSHLYHRTCIDPWLQSSSNSCPLCKREIPSLPPPPAQFHYGSMLVS 627
BLAST of Ggra602.t1 vs. uniprot
Match: R7Q8Z4 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Z4_CHOCR) HSP 1 Score: 306 bits (783), Expect = 1.630e-97 Identity = 160/282 (56.74%), Postives = 193/282 (68.44%), Query Frame = 0
Query: 263 MQDAGALGVIVVNFKDEGDHLANMKLNQSKT-NPEINIPAVMIRYRDWARIAPCWNETNIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMLI 541
MQDAGA+GVIVVN KD D LANMK+N +K + ++ IPAVMI + DW I PC N+T + FT+EGEA D +G DALNW MMRGMALWILCQCGVNVVRYKRR+SE+RARADAIAALPVETY R + ++ T + ++S + PAP+S ++DH ER L+ S + +ST + + EEEE +CAVCL+ FE+GQQVR LAC HLYHR CIDPWLQSSSN CPLCKRE+PNLPPPPTQLHYGSM +
Sbjct: 1 MQDAGAVGVIVVNRKD-ADKLANMKVNDTKELSTQVTIPAVMISHHDWNTILPCRNDTKVAFTAEGEASFDIDFGRDALNWTMMRGMALWILCQCGVNVVRYKRRMSEFRARADAIAALPVETYSR-----PENMHDDDTSVAEESSHTDQCVTESIPAPKVAGPAPTSPILDHDPERAGLIASSDGESVAAXXXXXXXXXXASTAFEDERDGEEEESVCAVCLDNFETGQQVRFLACGHLYHRVCIDPWLQSSSNCCPLCKREVPNLPPPPTQLHYGSMSV 276
BLAST of Ggra602.t1 vs. uniprot
Match: A0A5J4YWS7 (E3 ubiquitin-protein ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWS7_PORPP) HSP 1 Score: 260 bits (665), Expect = 1.020e-77 Identity = 185/498 (37.15%), Postives = 239/498 (47.99%), Query Frame = 0
Query: 55 AIIITAPEACGGSRVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGAYVRLMSRVGRKHVHTLRSAAKSLFVGMVFGRVPDAVLLSDAPPQIPLLETAAISVRARTTSDAWKNDPQKPAPTVGPTESPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGV--CDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCW-NETNIIFTSEGEA--QGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEV--------TPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
A+++ APE CGG+ V H++A FGP+ ++ V LF PR Q G YV S PD + + L +A A T S + + P KP S T LFD C LSV D+ K AV V+ RG CDF +KVR+MQ GA GVI+VN++ +GD L NMKLN + + I IP++M+ +R+WA++APC N ++ F++EGEA DYG +ALNWAMMRGMALWI QCGVN+VR KRR SE AR DAI ALPV TY + A + LAD XX H ER L GPS +S +P + E +E+EP+CA+C++ FE G QVR L CSH+YH++CIDPWL SS +CP+CKREIPNLPP YGS+
Sbjct: 21 ALVVHAPEKCGGAHVATHASALFGPSTHDGSLHG--VRLFAPRPQNRGKYVTSSSEG------------------------PDDDGEAGGVDEEDGLRRSAAHAGALTKSLSASSSPSKP------------SKETE----------------------------------LFDGCKPLSVEKDIALAKDAVVVLVRGPGPCDFERKVRNMQKVGARGVIIVNYQSQGDRLVNMKLNNTSKSDTITIPSLMVLWREWAQLAPCRENNISVSFSAEGEAAFDFDYGREALNWAMMRGMALWIFFQCGVNMVRLKRRHSELTARVDAIEALPVRTYTKRRTTSASAXXXXXXXXXXXXXATCLADGGS-YAAADARKGNTSAXXXXXXXXXXXHGTERTRLR------GPSQEQPDVPVTQNSVRLPQTSDE-DEDEPMCAICIDNFEEGDQVRELECSHIYHKACIDPWLYQSS-TCPVCKREIPNLPPTAANA-YGSL 436
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S1TLM0 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLM0_9RHOD) HSP 1 Score: 161 bits (407), Expect = 1.320e-42 Identity = 102/233 (43.78%), Postives = 128/233 (54.94%), Query Frame = 0
Query: 309 WARIAPCWNETNIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
WA A + + T+ GEA D YG DALNWAMMRGMALWIL QCGV++VR KRR SE ARA AI +PV T+ R T + SEP A S +D ++ + AG A A A S+ + E++ P+CAVCLEEFE G +R LAC+H+YH+ CIDPWL SS +CP+CKREIPNLPPPP+ YG++
Sbjct: 8 WAGAAN--SNVTVSMTAAGEASFDLDYGRDALNWAMMRGMALWILFQCGVSIVRLKRRHSEMTARATAIQNMPVCTFSRPPRV--------FTRSVPRGSEPLATFDHVGGSGGGAGTAEGGSELD-----AEVVPTASHAGDDGRRAAAGATVISTGA---NTDDEDDAPVCAVCLEEFEDGDLLRQLACTHMYHKECIDPWLAQSS-ACPVCKREIPNLPPPPSLNAYGAL 221
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0BJD8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJD8_9RHOD) HSP 1 Score: 117 bits (294), Expect = 4.490e-28 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 0
Query: 273 VVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCWNET-NIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADA 374
+VN+K +G+ L NMKLN S + ++ IP+VMI Y +W +IA C + + FT EGEA D YG D L WAMMRGMALWIL QCGVNVVRYKRR AR DA
Sbjct: 1 IVNYKKDGNRLWNMKLNGSTSELDVKIPSVMITYTEWRKIAGCRTKALTVSFTEEGEANYDIDYGKDVLTWAMMRGMALWILLQCGVNVVRYKRRNRHLNARYDA 105
BLAST of Ggra602.t1 vs. uniprot
Match: A0A1X6PG06 (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG06_PORUM) HSP 1 Score: 100 bits (249), Expect = 9.800e-19 Identity = 147/532 (27.63%), Postives = 191/532 (35.90%), Query Frame = 0
Query: 56 IIITAPEACGGS-RVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGA--------YVRLMSRVGRKHVHT-LRSAAKSLFV---GMVFGRVPDAVLLSDAPPQIPLLETAAISVRARTTSDAWKNDPQK---PAPTVGPTESPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKL--NQSKTNPE-------------------------------------INIPAVMIRYRDWARIAPCWNE-TNIIFTSEGEA--QGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPP 529
+++ AP CGGS RV+ H+ A FGP A + + + P D A + +SR R H+ LR +A SL V + P PL +T S A + + P P G T + A PR A ++PS++ S D C + S L GA +ARG C F KV Q AGA GV+V+N EG+HLANM+ N+S+ P + IPAVMI DWA + PC N FT EGEA DYG DALN A++RGMA G A +A + LL + XXXXXXXXX + +CAVCL+ F +G V L C H+YH CI PWL +SS CP+CKR + LPP
Sbjct: 59 LVVDAPARCGGSHRVLPHAGAMFGPAAADGLVLSVPLVALPRPGSGDPAPPPAAPLSRLASLSRPRRLHLPAALRLSAPSLSAPGPAXXXXXXXXPVASREGVPPPPL-DTDCGSATAPSVAVGRAARPASRLSPGAVAGATLALXXXXXXXXXXX-----XXAAGGPRSGAPA-AAPSVEASLPG--DGCGAMDPSPSLA---GAAVAIARGGCPFYAKVLAAQAAGAAGVVVINAPAEGNHLANMERAHNESQALPSASGAXXXXXXXXXXXXXXXXXXXXXXXDAPSAADDAGVRIPAVMISAADWASLVPCLGGGVNASFTGEGEATLDVDYGRDALNGALVRGMA------AGSXXXXXXXXXXXXXXXAPGPSAAKXXXXXXXXXXXXXXEPSDTAALLPQRAALVAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------DEVCAVCLDAFVAGVLVTPLPCGHVYHAGCISPWLLTSS-VCPVCKRVVGGLPP 549
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0G1Q5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Q5_9RHOD) HSP 1 Score: 88.2 bits (217), Expect = 1.640e-17 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 472 SEEEEPIC-AVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
S+ +EP+C A+CL++FESGQ R LAC+H+YH+ CIDPWL SS SCP+CKR I LPPP + YGS+
Sbjct: 33 SDSDEPLCCAICLDDFESGQTARQLACNHVYHKECIDPWLLQSS-SCPICKRVIGELPPPLSNDFYGSV 100
BLAST of Ggra602.t1 vs. uniprot
Match: K3WUB1 (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUB1_GLOUD) HSP 1 Score: 79.0 bits (193), Expect = 3.970e-12 Identity = 75/297 (25.25%), Postives = 119/297 (40.07%), Query Frame = 0
Query: 246 VAVVARGVCDFAQKVRHMQDAGALGVIVVN--FKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARI------APCWNETNIIFTSEGEAQGDYGHDALNWAMMRGMALW-ILCQCGVNVVRYKRRVSEY---RARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHA-------ERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKRE 523
VA+V RG C+F QKV + Q A A VIV++ + E M+ +Q +N I+IP+V + Y A+I AP W+ + GE ++L ++ + L ++C + + ++ R R A LP+ Y R+ Q + L + V+DH E ++ + C A +CA+CLE+F+ G V++L C H YH CIDPWL+ S+ CPLCK++
Sbjct: 84 VALVVRGECNFVQKVWNAQRANATAVIVMDNELRVEAPFHIIMQKDQHASN--IHIPSVFVSYTAGAKILHALRHAPPWSPVRVTLNQHGELPNSKTTNSLLKRIVAYIFLVSVVCVFSSGLSLISSTMFQFIGKRRRTRASRKLPLARYQRD-------LQRMLLQQLVEEQH----------------------VIDHITLDDLGDDEEYDIAFGTIGSHEGCGDA----------------------EVCAICLEDFQVGHNVKVLPCQHFYHVECIDPWLERQSSCCPLCKQD 327
BLAST of Ggra602.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D6799 (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D6799) HSP 1 Score: 70.9 bits (172), Expect = 9.780e-12 Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 474 EEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREI 524
+E +CA+CL+E+E G ++R+L CSH YH C+DPWL + +CP+CK+++
Sbjct: 21 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 71
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0BHE5 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHE5_9RHOD) HSP 1 Score: 72.0 bits (175), Expect = 1.460e-11 Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 0
Query: 183 SPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMK 287
+P PS TR+ L+ S IA++ R+ ++ +SP ++ L D C L+ DL+AVK +AV+ARG CDF+ KV +MQ++GALG ++VN+K +GD L NMK
Sbjct: 31 TPWPS--TRRALKK--STHSIAASTRDE-NSSASPVIE----LLHDGCKPLTEPNDLKAVKSKIAVIARGSCDFSTKVLNMQESGALGAVIVNYKKDGDRLWNMK 126 The following BLAST results are available for this feature:
BLAST of Ggra602.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra602.t1 ID=Ggra602.t1|Name=Ggra602.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=543bpback to top |