Ggra6012.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6012.t1
Unique NameGgra6012.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
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BLAST of Ggra6012.t1 vs. uniprot
Match: A0A2V3IM08 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM08_9FLOR)

HSP 1 Score: 338 bits (868), Expect = 6.550e-114
Identity = 178/267 (66.67%), Postives = 205/267 (76.78%), Query Frame = 0 
Query:    6 LTRRQAAAALVRCVRPYSAREVFAPCFRIASHFILGRVFGKLFVPSELGLSHLTTEPCADARFVLDMQHGSIVELRRYASSKALLCIAHSNRRTEVLALPPLHYSRVEISYQPDAAASRALSAQPPALPDPFVNVAAATVLPETSSVSAQSSSHFMSLFEQQQPQLQQXXXXXXXXXXXXXEPPPSALIQSSWHNFCVNYASIFPTGALAATVTREPGPVSAAVKKETIVISLNDPYALTFSNAASPSGAAIFRRQAPRRLLPRPTQ 272
            LTR+QA ++LVR VRPYSAREVFAPCFRIA+HFILG+  GKLFVP+ELGL HLTTEPCADARFVLD+QHGSIVE+RRYA++KALLC+AH+ RRTE L LPPLH+SRVEISYQPDA+A     A P    D   +VA+ +  P ++S+S QSSSH   LFEQ +                  E   +ALIQSSWH+FCVNY+SIFPTGALAATVT EPG VSA VKKE IV S+ND YALTFS+  SP G  +FRRQAPRRLLPRPTQ
Sbjct:   61 LTRKQAVSSLVRSVRPYSAREVFAPCFRIATHFILGKTLGKLFVPTELGLPHLTTEPCADARFVLDLQHGSIVEVRRYAATKALLCVAHAKRRTEFLTLPPLHFSRVEISYQPDASAG----ACPTTAGDQLTSVASTSAAPISASISVQSSSHLSPLFEQVE------------------ETSRAALIQSSWHHFCVNYSSIFPTGALAATVTTEPGSVSAVVKKEIIVTSINDAYALTFSDPTSPLGTGLFRRQAPRRLLPRPTQ 305
The following BLAST results are available for this feature:
BLAST of Ggra6012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IM086.550e-11466.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000197_piloncontigtig00000197_pilon:141530..142348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6012.t1Ggra6012.t1Gracilaria gracilis GNS1m malemRNAtig00000197_pilon 141530..142348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6012.t1 ID=Ggra6012.t1|Name=Ggra6012.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MQSTPLTRRQAAAALVRCVRPYSAREVFAPCFRIASHFILGRVFGKLFVP
SELGLSHLTTEPCADARFVLDMQHGSIVELRRYASSKALLCIAHSNRRTE
VLALPPLHYSRVEISYQPDAAASRALSAQPPALPDPFVNVAAATVLPETS
SVSAQSSSHFMSLFEQQQPQLQQRQPQHPSVQHPQIEPPPSALIQSSWHN
FCVNYASIFPTGALAATVTREPGPVSAAVKKETIVISLNDPYALTFSNAA
SPSGAAIFRRQAPRRLLPRPTQ*
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