Ggra5991.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5991.t1
Unique NameGgra5991.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length423
Homology
BLAST of Ggra5991.t1 vs. uniprot
Match: A0A2V3J1M0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M0_9FLOR)

HSP 1 Score: 456 bits (1173), Expect = 8.350e-158
Identity = 236/310 (76.13%), Postives = 273/310 (88.06%), Query Frame = 0
Query:  113 MALLRSIGNRFRRPDDRSESEHAAHHDSPFSLSLLQHSLLPHTVSHKVFGAVDAHSMLDETPELYYEDRPLGNSIQALEHIRVALRQLASAANEHKDTLVAHAANERSLGDTLLHVMQGAAARRSSASTDDHQLSLSEHTPEHDENSPSSHFSAYLPIEAREAQKALGKGLSSHSDTVLKLSVAISSPINDLTRSFEERYTRKIIPLRKRYIDQKGQYLKYKRHADMADTDEKRSYYEALAEAAKPVWVRTSTELRTESDVMTELTSKNMAKWSKSLALQYERALAIAAANFADAFNRAKSVPSLSRSGK 422
            M LLRSIGNRFRRPDDRS+ +  ++HD+ F+ S+L HS+LPHTVS K+ G  DA   +DE+P+LYYEDRPLGNSI ALE IRVALR+LASAANEHKD LVAHA+ ER+LGDTL+ VMQ    R +++  DD  +SLS+   +HDEN+P+SHFS YLPIEARE+QKALGKGLS HSD ++KLSVAISSPINDLTRSFEERY RKI+PLRKRYIDQKGQYLKYKRHADMADTDEKRSYYEALAEAAKPVW+RTSTELRTESDVMTELT+KNMAKWS+++AL +ERALAIAAANFADAFNRAK++PSL +SGK
Sbjct:    1 MTLLRSIGNRFRRPDDRSDHDIHSNHDASFAFSVLPHSILPHTVSSKLLGGTDAP--IDESPDLYYEDRPLGNSIHALEEIRVALRELASAANEHKDMLVAHASTERTLGDTLVDVMQ---PRTTASENDDEDMSLSDSPHDHDENNPTSHFSTYLPIEARESQKALGKGLSCHSDAIIKLSVAISSPINDLTRSFEERYQRKIVPLRKRYIDQKGQYLKYKRHADMADTDEKRSYYEALAEAAKPVWIRTSTELRTESDVMTELTAKNMAKWSRNIALHHERALAIAAANFADAFNRAKTIPSLWKSGK 305          
BLAST of Ggra5991.t1 vs. uniprot
Match: R7QHJ4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHJ4_CHOCR)

HSP 1 Score: 102 bits (253), Expect = 3.880e-21
Identity = 64/216 (29.63%), Postives = 116/216 (53.70%), Query Frame = 0
Query:  175 ELYYEDRPLGNSIQALEHIRVALRQLASAANEHKDTLVAHAANERSLGDTLLHVMQGAAARRSSASTDDHQLSLSEHTPEHDENSPSSHFSAYLPIEAREAQKALGKGLSSHSDTVLKLSVAISSPINDLTRSFEERYTRKIIPLRKRYIDQKGQYLKYKRHADMADTDEKRSYYEALAEAAKPVWVRTSTELRTESDVMTELTSKNMAKWSKSLA 390
            E+Y +D  L +++  L+ +R  L+ +ASA ++H+  L+  A +E ++   L             A+ +D+ L+L                   L     +AQ+ LG+   S S+ V + ++ +S+P++DL+R+F+E Y  KI+PL+KRYI QK +YL+Y R A  A+   ++    ++AE+A P+W  TS  L  E   +    + NM++W+ ++A
Sbjct:   37 EVYQDDERLLDALLDLDELRTMLQSVASAVDQHRTRLLDVARSEAAIATIL-------------ATPNDNLLAL---------------LRKQLSPARIDAQRGLGEAQMSASNAVARFALDMSTPMSDLSRTFDEAYNGKIVPLKKRYIAQKTEYLRYMRQAQAAEDLARKESLNSMAESAVPMWKATSDTLMAEIQSLVSYATSNMSEWTLNVA 224          
BLAST of Ggra5991.t1 vs. uniprot
Match: A0A2V3IZZ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZZ6_9FLOR)

HSP 1 Score: 65.9 bits (159), Expect = 1.710e-8
Identity = 54/196 (27.55%), Postives = 87/196 (44.39%), Query Frame = 0
Query:  175 ELYYEDRPLGNSIQALEHIRVALRQLASAANEHKDTLVAHAANERSLGDTLLHVMQGAAARRSSASTDDHQLSLSEHTPEHDENSPSSHFSAYLPIEAREAQKALGKGLSSHSDTVLKLSVAISSPINDLTRSFEERYTRKIIPLRKRYIDQKGQYLKYKRHADMADTDEKRSYYEALAEAAKPVWVRTSTELRTE 370
            + Y  D PL   +  L+ +R  + +LA+ A  HK  ++     E+ L  +L                          +PE   ++      AY+P +A  AQ A  +   S +  +   ++ +  PI DL R+FE+ YT KI+PLRKRY+ QK ++ + +R  D   TD     ++ L E    +W  TS  L  E
Sbjct:   52 DAYEADYPLYEILSVLDDLRNLISELATHAEAHKRAMLQLTRVEKQLSSSL--------------------------SPE---SALGDMLQAYVPKDALAAQFAFVQSQQSAASCLQAYAMDVYPPIVDLARTFEDSYTDKIVPLRKRYLAQKNEWNRLRRQTD---TDG----FDTLIETTATIWRATSETLSAE 211          
The following BLAST results are available for this feature:
BLAST of Ggra5991.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1M08.350e-15876.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QHJ43.880e-2129.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZZ61.710e-827.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..422
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000227_piloncontigtig00000227_pilon:94683..95951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5991.t1Ggra5991.t1Gracilaria gracilis GNS1m malemRNAtig00000227_pilon 94683..95951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5991.t1 ID=Ggra5991.t1|Name=Ggra5991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=423bp
MAARHGAFAARSPDRYAAAHRRALRRRRRARAPAHTESRLDAPRRPRPRA
YLLTRAAAVAARASWRIRLVLTKQLLSRPSPTAAAAATAATAATADSRAV
FTAHCLLFVLCSMALLRSIGNRFRRPDDRSESEHAAHHDSPFSLSLLQHS
LLPHTVSHKVFGAVDAHSMLDETPELYYEDRPLGNSIQALEHIRVALRQL
ASAANEHKDTLVAHAANERSLGDTLLHVMQGAAARRSSASTDDHQLSLSE
HTPEHDENSPSSHFSAYLPIEAREAQKALGKGLSSHSDTVLKLSVAISSP
INDLTRSFEERYTRKIIPLRKRYIDQKGQYLKYKRHADMADTDEKRSYYE
ALAEAAKPVWVRTSTELRTESDVMTELTSKNMAKWSKSLALQYERALAIA
AANFADAFNRAKSVPSLSRSGK*
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