Ggra5984.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5984.t1 vs. uniprot
Match: A0A2V3IYQ1 (Methyl-CpG-binding domain-containing protein 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYQ1_9FLOR) HSP 1 Score: 679 bits (1753), Expect = 1.360e-226 Identity = 437/1002 (43.61%), Postives = 554/1002 (55.29%), Query Frame = 0
Query: 45 SFTLVEMPTVKIVPPRS-WKLDEDQTAPSTTQ--------QLTQSSHPSSQIHDLLSKSSPVTMPTGPVQLVTNAKIVSKTATRSDAHSANGRVSLNLRIRQHYPTSAPP--SQQLKISIKTNLP-APSSHTPQVETSQNRTVDEEGKEP--TTEQNTLNENVEEKLNFKGDIAR---QEHNVYSSNLDP-----KLTNNNLQSATKAAXXXXXXXXXXXXXEVSPVTVTQQRDGSENDQ---QAPPVPNEQLRLLPVLSLPNGSSISHQHNLESRLTSSQLKVRVCFSCSRGAPCRGLVPCADCDHALHIHCSIPPMESVPSYPWRCPSCLAKKKSSVETKSVAVQTDDRISNYLKDNSRTWLPAKLRNKPKMADILPPEPKRRTLPDPAISVPFKYSRPIRLENGAIVPIRYIVDGRRAWYSDDDEPEEDYVAAYADVDAYELPANIKSCEYCAVRH-------------------------------------------------------------------------------------SADDSDLEGTGLRVSAAHQKSRYGRTVRNRAGNRLDFDVPSNEESPQEQPVEPPSLQGTSD-----ARNNAMKRRMWFYSSDRLMDGQMGAGHVPDQPMDQDERNRIRRSKSDHGPSFARDAYECNDSDIFADKHGKHRKRNAVHAFEM-GDSRGYSQMPG----GPMQNLHTDANQSLAIKRMKTEDE--GLWDSSR-YARRRTKRPAFYGSEYDGHGAREDPNFGSRKQRPPLSKPGKGYKFCHMCSAQIANRRFFCTHCGAENPSAKRKAIKITPDVKDPKPRGRPPKSSRQITDLSLGAVRTGEAPHLKDASRPAEVRRSSEXXXXXXXXRPKESQKDLEEPYALQMEDLRVLRENGYRSIEEMIASPPMEVDDLFDKYWPTRCYKLYLRITKRRKALSTGPQVQESSKGDIGIEDVIDVEGVHSYHHSPDSGSLSDDDKQSPFESDGIPQGEE 923
T MPTV P + W +D D + Q+ S+ P QIHDL++KSSP +P GPVQLVT+AKIV +D +A+GRVSLNLRIR+ YP S +QQ+ N+ A ++ + NR + K+P T NT ++ + I+ +E + P KL + L S KA EVSPVTVTQQ++GS AP VP E+L+LL +L +PNG+S+ + E ++ RVCF CS+ +P L+ C +CD ALHIHCS PP+ +PS+PWRCP CL K++SSV TKSVAVQTDDR S YL D SR WLP KLR KPK+A +LPP+P+RR+LP PA+SVPFKYSRPIRLENGA+VPIRY+VDG RAW+SDD+E +EDY AAYADVDAY+LP NIKSCEYCAVRH SADDSDL+ + +AA Q++R+ R VRNR G RLDFD+ SN+ S + E P L G+S R W++SS ++G G+ DQP D ++RNRIR +++H R +YE D+ + K GK RKR+A+HAFE GDSR SQ+P G ++++ D +KR+KT+ + LWDS R YARRR K+PAFYGSE D RE+ N G+RK RPPLSKPGKGYKFCH CSAQIANRRF+CT CGAENPSA+RK IK+ + K+PKPRGRPPKSSRQ +L A HL+ +PY L+ ED RVLRENGY +IEEM+A+PP EVDDLFD YWPTRCYKLYLRI + + T + I V VEG +SP+S S+SD+DK S F S+ P EE
Sbjct: 132 GLTPAIMPTVNFAHPHNMWIVDGDPPISNPPXXXXXXXXXQVLPSTVPQPQIHDLVTKSSPANLPEGPVQLVTDAKIVKGPPQSADPDNADGRVSLNLRIREQYPVSTAQHGTQQISSQPMENISLADDPNSDHLSKDVNRP---KLKQPSLTVVNNTDPDHGRPSIKAGAPISAVVCKESTSKQAQKPPVKAILKLPHKGLLSGLKAKEKK----------EVSPVTVTQQQEGSGKSNILPAAPSVPQEKLQLLSILHVPNGASLEQGKHSEIVNKLTETSKRVCFICSQTSPTAALILCVECDQALHIHCSNPPLSRLPSFPWRCPQCLNKRRSSVTTKSVAVQTDDRTSVYLSDGSRDWLPLKLRYKPKIAGLLPPQPRRRSLPAPAVSVPFKYSRPIRLENGAVVPIRYVVDGCRAWFSDDEEQDEDYSAAYADVDAYDLPPNIKSCEYCAVRHPGTFGSGRFCSTKCARTVGGLSRRKYPEHDGTEGGDRPRGXXXXXXXXXXXXXXXXXXXXXXXSAMIANVPHEHVMHMGAEFLPDSADDSDLDANEVPSAAALQRNRFRRPVRNRTGGRLDFDLQSNDNSLPDASAERPPLHGSSHIDVQGTRKTGSNAGNWYFSSQIGLEGHAAVGNDSDQPADGEDRNRIREPRTEHRFD-GRGSYEYTDT--YPHKPGKQRKRSAIHAFEAYGDSRRLSQLPPIDRIGNLESIDGDQ----PVKRVKTDRDMDSLWDSPRAYARRRIKKPAFYGSELDRR-MREEANMGTRKARPPLSKPGKGYKFCHKCSAQIANRRFYCTECGAENPSARRKVIKVPSEAKEPKPRGRPPKSSRQNGSSTLAAALAAAESHLR-------------------------------KPYILEAEDRRVLRENGYATIEEMMANPPEEVDDLFDAYWPTRCYKLYLRIRRSQHETLTSRREDRQKSTHI----VRHVEG-----NSPESVSISDEDKHSHFASESAPNDEE 1072
BLAST of Ggra5984.t1 vs. uniprot
Match: R7QR76 (PHD-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR76_CHOCR) HSP 1 Score: 231 bits (588), Expect = 9.940e-60 Identity = 199/712 (27.95%), Postives = 292/712 (41.01%), Query Frame = 0
Query: 304 RVCFSCSRGAPCRGLVPCADCDHALHIHCSIPPMESVPSYPWRCPSCL---AKKKSSVETKSVAVQTDDRISNYLKDNSRTWLPAKLRNKPKMADILPPEPKRRTLPDPAISVPFKYSRPIRLENGAIVPIRYIVDGRRAWYSDD--DEPEEDYVAAYADVDAYELPANIKSCEYCAVRHSA-----------------------------DDSDLEGTGLRVSA----------------------------------------------------------------AH--QKSRYGRTVRNRAGNRLDFDVPSNEESP-------QEQPVEPPSLQGTSDARNNAMKRRMWFYSSDRLMDGQMGAGHVPDQPMDQDERNRIRRSKSD-HGPSF----ARDAYECNDSDIFADKHGKHRKR------NAVHAFEMGDSRGYSQMPGGPMQNLHTDANQSLAIKRMKT-------------EDEGLWDSSRYARRRTKRPAFYGSEYDGHGAREDPNFGSRKQRPPLSKPGKGYKFCHMCSAQIANRRFFCTHCGAENPSAKRKAIKITPDVKDPKPRGRPPKSSRQITDLSLGAVRTGEAPHLKDASRPAEVRRSSEXXXXXXXXRPKESQKDLEEPYALQMEDLRVLRENGYRSIEEMIASPPMEV-DDLFDKYWPTRCYKLYLRITK--RRKALSTGPQVQESSKGDI 881
R+C C + AP ++PCA+C +H HC PP+ ++P+YPWRCP CL A + ++ +S QTDDR+S YL D R WLP KLRNKP A LP +P+ + LP PAI+ P +Y RP+RL +GA+VPIRY+ D RA+ S D D+ ED V YA D +++ N+KSCEYC+ H D+ G GL V AH +SRYGR VRNR +D +V E S E P +L + AR +A W S + G + D N + K+ GP D + N++ F K +++KR N + EM YS P ++ +T + + + K E G S+ R K GS+ + G P ++ + + +PGKGYKFCH C IANRRFFCT CGA NPSAKR TP V Q+ + + + +S+ AE+ D + AL++++L++L GY++ + ++++PP+E ++ Y T C++ Y R+ + RR A + S KG +
Sbjct: 210 RICQFCRKSAPSAAMIPCAECRDGMHTHCVNPPLSTIPAYPWRCPKCLKVRANRMAACMVRSAGTQTDDRVSIYLADKQRDWLPLKLRNKPNQAPCLPSKPRHKALPSPAIAPPVRYGRPVRLASGAVVPIRYVADSFRAYSSGDEADDGFEDDVI-YAASDDFQIAHNLKSCEYCSTPHPGTFGSGRFCSSKCARTVGGLSRRKFNQERRDEYAEGGRGLVVEGISNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTHFSDRPTLPLGIIPEDDEDDPDPEVLPNAHVSHRSRYGRVVRNRTPGAIDANVNGRENSSGGPSYDDAEDGKSPTNLPFQASARESASTAG-W---SRNVRHASELEGDTKEMQFSDDSHNSTHKMKAQSQGPHLPATEGSDGHALNENG-FQRKSNRNKKRSFTYMENPENGLEM-----YSDQPDAMSRHDNTHSRDEPYVPQAKKHRNETRLLGTETPELAGKVSSAEQKDIRQKGTFRGGSDKNRSGK---PLTSAKSRSSGVLRPGKGYKFCHECGELIANRRFFCTLCGAANPSAKR-----TPRV--------------QVNAKDISGGKPPQHKAKGSSSKHAEL-------------------SDPRKSPALRIQELQLLSACGYKTEKNILSNPPVEPPENDSPPYTATVCWEAYQRVLRERRRTAKKASTKASSSVKGQL 869 The following BLAST results are available for this feature:
BLAST of Ggra5984.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5984.t1 ID=Ggra5984.t1|Name=Ggra5984.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=934bpback to top |