Ggra5960.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5960.t1
Unique NameGgra5960.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length346
Homology
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BLAST of Ggra5960.t1 vs. uniprot
Match: A0A7S1TB34 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB34_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 1.990e-22
Identity = 76/240 (31.67%), Postives = 122/240 (50.83%), Query Frame = 0 
Query:   27 SFNIYPTTDAHVLWHRVLHTAANHGALPAALAQRAFEQQVHALAFTPELFEFLATVSFAELQTAIVDFLVLLHHQLLCDADHAAVDSMHRELLPSVWQRVRDQIGVFEHGEPTSGRRSAVLEHLVQISFMTPWRVDV-LAIYTPSAAP----SGCPPSPNSNSQLPSSQLLTKLLHDWILFDSLL-SPIHASPHEVVEALERAIATSQSRHIFSYAHALL-------QTRFVAQLPTDVL 253
            +F + P T   +  ++ L      GAL  A +   F   V  ++   EL  FL +V   EL+  ++DFLVLL +QL  + D A+++ +  E+LP +W++V         GEP + RR  VLE +VQISFMTPW+VDV +    P        SGC  S +   ++  S+L  +L  DWI ++ +L +P+  SP EV   L R + +  + + +  A  L+           ++ LP D++
Sbjct:   65 AFRVSPKTQTELAVNQALWYMVRDGALDVARSGSCFNANVFGVSIPAELQTFLLSVELEELEWVVIDFLVLLKYQLDEEGDLASIERLQAEVLPELWEKVLHSEDETVEGEPVNQRRRDVLESIVQISFMTPWKVDVNIWRLRPREMGLLFNSGCYSS-SIREEMSDSKLHARLFVDWIRYEEMLGTPLGLSPSEVSRILLRNVQSRTAYYSWLAAKTLMLCASRVEHGNLLSALPVDLV 303
The following BLAST results are available for this feature:
BLAST of Ggra5960.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1TB341.990e-2231.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:730825..731862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5960.t1Ggra5960.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 730825..731862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5960.t1 ID=Ggra5960.t1|Name=Ggra5960.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=346bp
MRLSFVSPPPLRSQSALKLASDAAFCSFNIYPTTDAHVLWHRVLHTAANH
GALPAALAQRAFEQQVHALAFTPELFEFLATVSFAELQTAIVDFLVLLHH
QLLCDADHAAVDSMHRELLPSVWQRVRDQIGVFEHGEPTSGRRSAVLEHL
VQISFMTPWRVDVLAIYTPSAAPSGCPPSPNSNSQLPSSQLLTKLLHDWI
LFDSLLSPIHASPHEVVEALERAIATSQSRHIFSYAHALLQTRFVAQLPT
DVLDRLVAWVVRRSCERLPPRQRRLASLRKLLAQSSQRLREVSSDACVSF
SELLLQDDDDDGSAQDDIVPACDGQAALYPLNVLPWKGYRSAHHV*
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