Ggra5944.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5944.t1
Unique Name	Ggra5944.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	1008

Homology

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BLAST of Ggra5944.t1 vs. uniprot
Match: A0A2V3J390 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J390_9FLOR)

HSP 1 Score: 263 bits (673), Expect = 4.760e-70
Identity = 157/443 (35.44%), Postives = 243/443 (54.85%), Query Frame = 0

Query:    1 MKQRIILSETLRTPGDTSNEH--ALRRSKRFLEKEVVGPVPQGRTNRPGTIDRELEFHRNFYASDGFPQHASP--FSASKFRPVQSHSRAGIREHAETIPSIAEYREREPVFAGEPAPYNFAVDMGGPTTSRHRPTRRQKSDSFCLNGALENVCNSKGRCILQLLCLISFIAFALHITTTNGDGTRSSRSILYDA----LPWVFRATNISAQQTRSKALWENHIVLSDDNRILIPETFESRWNIEVAPLLENQLYRIWDELPNIQCSDGERVYAGFSLTESESLPATVSFENKCNHDTSPLGCTEQRQVADLRHISIDLPSKSSRSSYSVKIVMKRSVGTTDATADPDA-MSSVAKGIVQFHLSDSSKIALVRYCGDRRHHFSDNIVSSYTASNKVGALSLYELKRMYALTSRNRRGASYFTELWDANELSRATFDPMEHSWH 434
            MKQRI+L   L    DT + H  +  +S +F+E  V   VP+G ++ P   +  +   R  Y  +GFP   +    +A  F    +H+     + +        + + +   + +    + ++ +G       R T ++   +      +E+   S GRC   L+CL        +    N   +  +  + Y A    L     A+NI+   TRSK LW +H+V  D N+ILIPETFESR+N E+APLL+N L R+W +   ++C +GE+ +A FSL E+E+LPAT+SF  +C+       C ++ +V+DLR + I +PSKSS SSYSV I++ RS       +  DA +  VA+G VQ  LSD SK+AL RYC  +RHHF+D+  S+  + N +  ++LYELKR+Y + SR +    YF++LWD +ELS+AT DP++HS H
Sbjct:    1 MKQRIVLFNNLTPSEDTPHPHGDSANQSLKFVEGYVR--VPRGESSNPLKSNHNMR-GRKQYPFNGFPSRTTHERLTAGLFSSKSAHTSGTRLQTSPDENRHTRFVDEKSFASQDRVSEDISLYLG------QRSTSKRNCRNLGPRSPVESTWLSGGRCRSALICLTCMFFSLWYFKEINETPSEGNNPVRYLASRISLDKFSGASNITQGHTRSKTLWIDHVVQGDQNQILIPETFESRFNNEIAPLLDNHLDRVWGDNALLRCPNGEQTFAMFSLKEAENLPATISFGKQCSRMKQLNPCFQEHEVSDLRQLQIQVPSKSSLSSYSVTILINRSADKNSEESPRDAQVLGVAQGTVQIVLSDLSKLALKRYCSRQRHHFADDATSTSNSENDIRLITLYELKRLYGVLSRRKLDTGYFSQLWDVHELSKATIDPVQHSRH 434

The following BLAST results are available for this feature:

BLAST of Ggra5944.t1 vs. uniprot

BLAST of Ggra5944.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J390	4.760e-70	35.44	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 982..1007
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 704..721
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 722..812
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 639..653
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 678..703
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 983..1007
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 584..605
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..913
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 846..881
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 156..175
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 176..1007
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000068_pilon	contig	tig00000068_pilon:680751..683774 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5944.t1	Ggra5944.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000068_pilon 680751..683774 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5944.t1 ID=Ggra5944.t1|Name=Ggra5944.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1008bp
MKQRIILSETLRTPGDTSNEHALRRSKRFLEKEVVGPVPQGRTNRPGTID
RELEFHRNFYASDGFPQHASPFSASKFRPVQSHSRAGIREHAETIPSIAE
YREREPVFAGEPAPYNFAVDMGGPTTSRHRPTRRQKSDSFCLNGALENVC
NSKGRCILQLLCLISFIAFALHITTTNGDGTRSSRSILYDALPWVFRATN
ISAQQTRSKALWENHIVLSDDNRILIPETFESRWNIEVAPLLENQLYRIW
DELPNIQCSDGERVYAGFSLTESESLPATVSFENKCNHDTSPLGCTEQRQ
VADLRHISIDLPSKSSRSSYSVKIVMKRSVGTTDATADPDAMSSVAKGIV
QFHLSDSSKIALVRYCGDRRHHFSDNIVSSYTASNKVGALSLYELKRMYA
LTSRNRRGASYFTELWDANELSRATFDPMEHSWHPLTRGSRRFRRRQQDS
PVEKNEKPSDMSSLMSEPVKVDGEIASNTSEVESMNEGKSVPSSNTLESD
PETFRPNNSSSLDMTNQVDLPKVSPLREEDKNESSISETASEPKAAGNEE
QKEAQDEDEVLPDIPPEAEELDDDDDSSTDNQSQEESGERQGNGNVLQSE
QIPDRRQESAISETTDSTTGNKPPSINVAPREGDRDNPPGSGTTASTNQL
SARDPHSRAERQRAYNTKPVAPQEGDLANPSDSRTTATSNQPSARGVHSQ
AETQRTYDTRKEGRLSEQVQTSDLDDDGTLSQSPPSHVRDMELGQQSSQL
HEIRQEGEPGSHQPPQSSLSSQPTVLWTENAGTQQPGHSQSAETPQTMPR
SPQNNANRLLSRGPPSQVERAERLSEGFRSTQIPSRVPIPTRADRTLQPP
QVTSLRSTGSQTQHEPQSSQTSPNNPHTLHMETPLQRPLSRIRGAEVQQE
PSHPNNGAYESVPISPRAHRIIGVQNQLPNRRESHPQIHSRSVVEETRGS
RAVADWRALASTNNQQPNSFQDVLGGGSAASHINARRSPQNIGSTNIKTR
TPHTHYA*