Ggra5935.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5935.t1
Unique NameGgra5935.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length218
Homology
BLAST of Ggra5935.t1 vs. uniprot
Match: A0A2V3J379 (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J379_9FLOR)

HSP 1 Score: 319 bits (818), Expect = 1.230e-108
Identity = 155/205 (75.61%), Postives = 177/205 (86.34%), Query Frame = 0
Query:    1 MKCLLSILLSLALVSFSFAQAEKKKILLKVNLGGGPVNDFIGEEQLMDMEDFAKTIVRSPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEGIIVHLTQKAQHPALCGFIVEGFPVPKPDGSEYKAIARAPPGTEGGDMAGE 205
            MK  + + L LA+VS  FAQ   KKI+LKVNLGGGPVNDFIGEEQLMDME FAK + R PI NTDQQ+VFQSQRFSR  DFTMR+P+PDGIYSVTLLF+ETYQ+AC PGGRVFD+SLGTP+SGV++VI+NFDVFQ+AGC+SA+GQKFDKVPSKEGI+VHLT+KAQHPALCGFIVEGFP PK DGSEYKAI R+ P    G M G+
Sbjct:    1 MKIAIVVYLLLAIVSSGFAQTGNKKIVLKVNLGGGPVNDFIGEEQLMDMEAFAKNVARVPIANTDQQQVFQSQRFSREGDFTMRVPVPDGIYSVTLLFSETYQKACAPGGRVFDVSLGTPVSGVSRVIENFDVFQAAGCASAYGQKFDKVPSKEGIVVHLTRKAQHPALCGFIVEGFPAPKGDGSEYKAIDRSTPDQNAGGMNGD 205          
BLAST of Ggra5935.t1 vs. uniprot
Match: R7QSB1 (Malectin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSB1_CHOCR)

HSP 1 Score: 257 bits (657), Expect = 7.970e-82
Identity = 129/211 (61.14%), Postives = 168/211 (79.62%), Query Frame = 0
Query:    6 SILLSLALVSFSFAQAEKKKILLKVNLGGGPVNDFIGEEQLMDMEDFAKTIVRSPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEGIIVHLTQKAQHPALCGFIVEGFPVPKPDGSEYKAIARAP--PGTEGGDM--AGEGMGGEAP 212
            +++L L+L++ + +Q    KI LKVNL GGPV DF+GE+Q++DM  F+K +VR PIQNTDQ EVFQSQRF+R  D T+R+P+PDGIYSVTLLFAET+++AC  G RVFDISLGTP+SGVTKV+D FD+FQ+AGC +A G++FD VPSK+GI+VHL+Q AQHP+L GFI+EGFP PK +G EY+AIA+A   P T G  M  A   +G ++P
Sbjct:   65 TLVLFLSLLTLTASQ----KISLKVNLAGGPVGDFLGEDQVLDMTGFSKNVVRDPIQNTDQPEVFQSQRFARSSDLTLRLPVPDGIYSVTLLFAETFRRACVAGARVFDISLGTPVSGVTKVVDKFDLFQTAGCQAAHGKRFDGVPSKDGIVVHLSQVAQHPSLAGFIIEGFPQPKGNGKEYQAIAQAQINPATYGTAMPAADAALGAQSP 271          
BLAST of Ggra5935.t1 vs. uniprot
Match: A0A1X6P0P9 (Malectin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0P9_PORUM)

HSP 1 Score: 191 bits (484), Expect = 1.320e-55
Identity = 95/192 (49.48%), Postives = 130/192 (67.71%), Query Frame = 0
Query:   19 AQAEKKKILLKVNLGGGPVNDFIGEEQLMDMEDFAKT-IVRSPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEGIIVHLTQKAQHPALCGFIVEGFPVPKPDGSEYKAI---ARAPPGTEGGDMAGEG 206
            A   + K   KVNLGG    DF+ E  ++DMEDF +   + +PI  TD  +VF++QRF R ++   RIP+PDG+YSVTLLFAET++ ACR GGRVFD+ LGTP +G+   + NFD+F+ AG  +AFG++FD VPS EGI+V L    Q+P + GFIVEGFP+P+PDG+  + +   A A P  +G  + G G
Sbjct:   41 ADGPQMKTFFKVNLGGDASGDFLAESSVIDMEDFPRLRTMTAPIAKTDNPDVFRTQRFGRSENVMFRIPVPDGVYSVTLLFAETWEGACRVGGRVFDVLLGTPQTGLKLAVQNFDIFREAGGFTAFGKRFDAVPSAEGILVVLQPVVQNPQIAGFIVEGFPLPRPDGAPPQPVGMPAEAAPAFQGVGVVGIG 232          
BLAST of Ggra5935.t1 vs. uniprot
Match: A0A2V3IXG3 (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG3_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 2.190e-27
Identity = 70/210 (33.33%), Postives = 119/210 (56.67%), Query Frame = 0
Query:    6 SILLSLALVSFSFAQAEKKKILLKVNLGGGPVNDFIGEEQLMDMED-FAKTIVRSPIQNTDQQ-EVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEGIIVHLTQKAQHPALCGFIVEGFPVPKPDGSEYKAIARAPPGTEGGDMAGEGMGGEAPQ 213
            ++LL+L++   S      ++I  K+NLGG  V+ F  EE ++++++ FAK      I+ +     VF++QRFSR +D  +  P+PDG+YSVTL+F+ET++ A   G RVFD+ LG+  +GV +VI+  D F+S G + +  +KF+ + ++ G+ + L    Q+P + G I+ G+   K    +   +   P   E   +    MG   PQ
Sbjct:   12 TLLLALSVCCLS-VLCSSERIEWKINLGGDAVDGFQAEEAVLNVDEKFAKMRYHGTIKGSGADLNVFKTQRFSRAEDLVLNFPVPDGVYSVTLMFSETWKGAYGSGNRVFDVYLGSKPNGVVRVIEAMDPFRSGGPAGSVRRKFNDIATRGGLTLALRPIKQNPQIAGIIISGYSYGKSYMEDLPTVPAGPSEVEDFSLV-NNMGPNLPQ 219          
BLAST of Ggra5935.t1 vs. uniprot
Match: A0A6L9ECP2 (PKD domain-containing protein n=1 Tax=Flavobacteriaceae bacterium R33 TaxID=2697053 RepID=A0A6L9ECP2_9FLAO)

HSP 1 Score: 69.3 bits (168), Expect = 4.580e-10
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0
Query:   28 LKVNLGGGPVNDFIGEEQLMDMEDFAKTIVRSPIQ--NTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETY------QQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSS-AFGQKFDKVPSKEG-IIVHLTQKAQHPALCGFIVEGFPVPKPD 183
            L++N  GGP   F+GE+   D       +   PI   NT+  E++Q++RF+     T  IP+  G Y++ L FAE +            G R+FDI     I G  + +DN+D+  +AG S+ A  + F  +   +G + + LT   ++P + G  V G   P  D
Sbjct: 1881 LRIN-SGGPALTFMGEDWSADQYFLGGGVFSDPIAIANTENDELYQTERFNTSGILTYEIPVASGDYNINLHFAEIFFGVPSGDPTGGEGSRIFDID----IEGGQQTMDNYDIVAAAGGSATAVIETFSNITVNDGSLTIILTSVVENPKISGIEVFGSGAPIAD 2041          
BLAST of Ggra5935.t1 vs. uniprot
Match: A0A1X6NLY3 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLY3_PORUM)

HSP 1 Score: 65.9 bits (159), Expect = 6.630e-9
Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = 0
Query:   64 TDQQEVFQSQRFSRGDDFT----MRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGC--SSAFGQKFDKVPSKEGIIVHLTQKAQHPALCG 171
            T    V+ S R+  G DF       +P+P G+Y++ LLFAET+  A  PG RVFDI++G    G+  V  + D++  A    ++A  + F  +     +++ L  + +  +LCG
Sbjct:   37 TTDDVVYHSCRYGVGGDFAPAWGYTLPLPPGVYTLKLLFAETFDGAWTPGARVFDIAVGDAARGLVAVEPDVDIYAEAQLQENTALVKTFTNLVLNGTLLLRLYPRVESASLCG 150          
BLAST of Ggra5935.t1 vs. uniprot
Match: endo-1,4-beta-xylanase n=4 Tax=Teredinibacter turnerae TaxID=2426 RepID=UPI0003613946 (endo-1,4-beta-xylanase n=4 Tax=Teredinibacter turnerae TaxID=2426 RepID=UPI0003613946)

HSP 1 Score: 62.4 bits (150), Expect = 9.920e-8
Identity = 47/174 (27.01%), Postives = 80/174 (45.98%), Query Frame = 0
Query:   14 VSFSFAQAEKKKILLKVNLGGGPVN-DFIGEEQLMDMEDFAKTIVRSPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEG-IIVHLTQKAQHPALCGFIVEGFPVPKPDGS 185
            + F F + +  ++++ +N GG   + D I  +        + +     I  T+   VFQS+R+    +++ RIP+ +G YS+ L FAE Y +    G R F++     + G   V+  FD+F   G  +A+    D VP  +G + + L     +  L G  V       PDGS
Sbjct:  840 IGFGFIRDDGSRLIVAINAGGQSTSLDGIAYQADRYASGGSTSTTSDAINGTNDDTVFQSERYG---EYSYRIPVTEGTYSIALQFAEIYHE--EAGQRAFNVL----VEGQA-VLSAFDLFSQVGHDTAYTVTVDNVPVSDGELTISLETLIDNGTLAGVAVHS-----PDGS 998          
BLAST of Ggra5935.t1 vs. uniprot
Match: M0E0Y6 (LamGL domain-containing protein n=1 Tax=Halorubrum saccharovorum DSM 1137 TaxID=1227484 RepID=M0E0Y6_9EURY)

HSP 1 Score: 62.0 bits (149), Expect = 1.120e-7
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0
Query:   59 SPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSS-AFGQKFDKVPSKEGIIVHLTQK-AQHPALCG 171
            +PI+ T+   ++Q++ F  G D T+ + + +G+Y VTL FAET   A   G RVFDIS    I G T+V+  FD++  AG  + A  + F  +   +G++   T   + +  +CG
Sbjct:  225 NPIEGTEHDALYQTEMF--GGDLTLDVEIENGLYEVTLYFAET-SSALTEGDRVFDIS----IQG-TQVLSEFDIYSEAGGHNIALSRTFSDIEVTDGVLTISTNTISDNSKICG 331          
BLAST of Ggra5935.t1 vs. uniprot
Match: U5QK72 (Malectin domain-containing protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QK72_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 1.130e-7
Identity = 48/181 (26.52%), Postives = 85/181 (46.96%), Query Frame = 0
Query:   16 FSFAQAEKKKILLKVNLGGGPVNDFIGEEQLM----DMEDFAKTIVRS--PIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKVPSKEGIIVHLTQKAQHPALCGFIVEGFP-VPKPDGSEYKA 189
            F  A A        +N GG P  +   + Q      D++    T   +  PI NT    ++Q++R+  G  F+  +P+PDG Y+++L FAETY    +PG R F+++      G T ++ NFD+  +AG ++A  + F    +   + +  +   Q+  +    + G P  P  +  E+ A
Sbjct:   18 FFCASAYAAPTTFNINCGGVPYQNKSSDGQTWHWSGDVDYSGGTTYENAVPIANTANPYLYQTERY--GSSFSYNVPLPDGTYTLSLKFAETYFT--QPGQRKFNVTA----EGQT-LLSNFDILAAAGANTAITKSFTVKVTGGSLNIGFSGVVQNAKIDAIAISGGPSAPTSEPGEFSA 189          
BLAST of Ggra5935.t1 vs. uniprot
Match: malectin domain-containing carbohydrate-binding protein n=1 Tax=Halorubrum saccharovorum TaxID=2248 RepID=UPI0012694C0E (malectin domain-containing carbohydrate-binding protein n=1 Tax=Halorubrum saccharovorum TaxID=2248 RepID=UPI0012694C0E)

HSP 1 Score: 62.0 bits (149), Expect = 1.210e-7
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0
Query:   59 SPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAETYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSS-AFGQKFDKVPSKEGIIVHLTQK-AQHPALCG 171
            +PI+ T+   ++Q++ F  G D T+ + + +G+Y VTL FAET   A   G RVFDIS    I G T+V+  FD++  AG  + A  + F  +   +G++   T   + +  +CG
Sbjct:  385 NPIEGTEHDALYQTEMF--GGDLTLDVEIENGLYEVTLYFAET-SSALTEGDRVFDIS----IQG-TQVLSEFDIYSEAGGHNIALSRTFSDIEVTDGVLTISTNTISDNSKICG 491          
The following BLAST results are available for this feature:
BLAST of Ggra5935.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3J3791.230e-10875.61Malectin domain-containing protein n=1 Tax=Gracila... [more]
R7QSB17.970e-8261.14Malectin domain-containing protein n=1 Tax=Chondru... [more]
A0A1X6P0P91.320e-5549.48Malectin domain-containing protein n=1 Tax=Porphyr... [more]
A0A2V3IXG32.190e-2733.33Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A6L9ECP24.580e-1030.12PKD domain-containing protein n=1 Tax=Flavobacteri... [more]
A0A1X6NLY36.630e-931.58Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
endo-1,4-beta-xylanase n=4 Tax=Teredinibacter turnerae TaxID=2426 RepID=UPI00036139469.920e-827.01endo-1,4-beta-xylanase n=4 Tax=Teredinibacter turn... [more]
M0E0Y61.120e-733.91LamGL domain-containing protein n=1 Tax=Halorubrum... [more]
U5QK721.130e-726.52Malectin domain-containing protein n=1 Tax=Gloeoba... [more]
malectin domain-containing carbohydrate-binding protein n=1 Tax=Halorubrum saccharovorum TaxID=2248 RepID=UPI0012694C0E1.210e-733.91malectin domain-containing carbohydrate-binding pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021720Malectin domainPFAMPF11721Malectincoord: 54..159
e-value: 7.2E-18
score: 65.2
NoneNo IPR availableGENE3D2.60.120.430coord: 22..176
e-value: 1.2E-20
score: 75.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..217
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..217
IPR039155MalectinPANTHERPTHR13460UNCHARACTERIZEDcoord: 42..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:606503..607156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5935.t1Ggra5935.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 606503..607156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5935.t1 ID=Ggra5935.t1|Name=Ggra5935.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=218bp
MKCLLSILLSLALVSFSFAQAEKKKILLKVNLGGGPVNDFIGEEQLMDME
DFAKTIVRSPIQNTDQQEVFQSQRFSRGDDFTMRIPMPDGIYSVTLLFAE
TYQQACRPGGRVFDISLGTPISGVTKVIDNFDVFQSAGCSSAFGQKFDKV
PSKEGIIVHLTQKAQHPALCGFIVEGFPVPKPDGSEYKAIARAPPGTEGG
DMAGEGMGGEAPQNLMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom
IPR039155MLEC