Ggra5924.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5924.t1
Unique NameGgra5924.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
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BLAST of Ggra5924.t1 vs. uniprot
Match: A0A2V3J3C3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C3_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 4.870e-28
Identity = 66/168 (39.29%), Postives = 92/168 (54.76%), Query Frame = 0 
Query:   12 MMKSLFLMALMVGLVKGEVLICT-KSECMTEFGRKVKCYGVNAGEKTLFIQSFRGSDGRYYGYRQIALSNLFLTDDDTAASGSNNIVLGTTAPAVTITDTSREVEGVPKVMKAFDKQQRAQKQA------FSFPGFRGPICVDNEPQIFGDNGVVAFAKPFGLCCRAC 172
            +M  +  +A+++G   G  + C+ K  C T  G  +KC GV A  KTLF+++F GSDGRYYGY+Q A++NLF+ DD+    G   I+   T P+   T T   V    K+ +A  +    + Q       +SFPGF GPIC   + Q       V F KPFGLCC+AC
Sbjct:    3 LMSGIASLAVLIGFALGATVYCSEKGGCATVGGTLLKCSGVAAAGKTLFLRTFLGSDGRYYGYQQFAIANLFIDDDEEQNGGLGPIL---TLPSKPPTHTILRVAAGEKMAEASARNALPRPQIIEQFRPYSFPGFSGPICEVIKTQ----KRTVFFGKPFGLCCKAC 163
The following BLAST results are available for this feature:
BLAST of Ggra5924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3C34.870e-2839.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:548524..549048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5924.t1Ggra5924.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 548524..549048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5924.t1 ID=Ggra5924.t1|Name=Ggra5924.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MGGFDSRFARMMMKSLFLMALMVGLVKGEVLICTKSECMTEFGRKVKCYG
VNAGEKTLFIQSFRGSDGRYYGYRQIALSNLFLTDDDTAASGSNNIVLGT
TAPAVTITDTSREVEGVPKVMKAFDKQQRAQKQAFSFPGFRGPICVDNEP
QIFGDNGVVAFAKPFGLCCRACGF*
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