Ggra5923.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5923.t1
Unique NameGgra5923.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A2V3J3Y2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y2_9FLOR)

HSP 1 Score: 219 bits (558), Expect = 7.710e-71
Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 0
Query:    3 MGITYVRLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVRVFFAFSGFACTVSACALLE 156
            M  +Y R +E+G  VATGLTAGGMSYIT VEAP RAKLSA DQ+ H+RTTF RAM +FKPAG++LVP LI C+R +GK LY  AALPFAL APFTAL I P  K+LLTCPSPA+ KEEE+V  L+ TWAKRHAVR F A SGF CTVSAC LLE
Sbjct:    1 MNFSYTRFIEIGVAVATGLTAGGMSYITFVEAPCRAKLSAADQVLHFRTTFHRAMGVFKPAGIVLVPTLIVCARLTGKPLYYAAALPFALFAPFTALTIAPIYKQLLTCPSPANPKEEEDVKALVSTWAKRHAVRTFLAISGFMCTVSACVLLE 154          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A192IEM5 (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IEM5_9HYPH)

HSP 1 Score: 67.4 bits (163), Expect = 2.510e-11
Identity = 46/141 (32.62%), Postives = 68/141 (48.23%), Query Frame = 0
Query:   15 ATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVRVFFAFSGFACTVSACALL 155
            A +A  L AG   YI + E P+R +L     L  W+ ++ R  A+     +L   L +   R SG   +L  A       P+T LAIMP NK+L+  P+P+D   E+E+  ++  W + HA R        AC V   AL+
Sbjct:    7 ALLAAALFAGAAVYILVAEQPARLRLDGPALLAQWKPSYERGFAMQASLAVLSGLLGLWAWRNSGDWRWLAGAALILANWPYTLLAIMPLNKRLMATPNPSD---EDELRAMVGRWGRLHAGRA--VLGALACGVYLGALI 142          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A2V7QC90 (DUF1772 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7QC90_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 7.410e-11
Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 0
Query:   10 LLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRF-SGKSL-YLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVR 137
            LLE+ AT+ TGL AG   Y+ + E P+R +      L+ WR ++ RA  +   A L +  L+ A   +  G+    L A L    + PFT + I+PTNK+LL    PA  +       L+  W + HAVR
Sbjct:    2 LLELLATLCTGLFAGAAIYVNVAEHPARLECGTAAALRQWRPSYRRATVM--QASLAIAGLVAALGAWLQGRGTPVLVAGLLLGAVVPFTLVIILPTNKRLL---DPALDEASPRAAALLARWNRLHAVR 126          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A7J7IQV7 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQV7_9RHOD)

HSP 1 Score: 65.1 bits (157), Expect = 2.320e-10
Identity = 42/135 (31.11%), Postives = 62/135 (45.93%), Query Frame = 0
Query:    9 RLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVRVFFAFS 143
            +L +  A++   +  G   Y++LVE P+R     +     W  ++ RA  +  P   L     I     S +  +L  AL    + PFT +AIMPTNK+LL    P       E   L++ WAK HAVR   + S
Sbjct:    8 QLAQFFASLTCAVFTGAALYVSLVEHPARMGCGTLVDATQWAPSYKRATVMQAPLAALSTVFGITAWLASAEKGWLVGALLVGAVIPFTLIAIMPTNKRLLL---PGRDLSSAETARLLRRWAKLHAVRSVLSIS 139          
BLAST of Ggra5923.t1 vs. uniprot
Match: DUF1772 domain-containing protein n=1 Tax=Bowmanella dokdonensis TaxID=751969 RepID=UPI0019D3E6C9 (DUF1772 domain-containing protein n=1 Tax=Bowmanella dokdonensis TaxID=751969 RepID=UPI0019D3E6C9)

HSP 1 Score: 64.7 bits (156), Expect = 2.690e-10
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   10 LLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIAC-SRFSGKSL-YLGAALPFALIAPFTALAIMPTNKKLLTCPSPAD-QKEEEEVTGLIQTWAKRHAVRVFFAFSGF 145
            LL++ AT++TGL  G  +YI LVE P+R           W+ ++ RA  +   A L L   L    + + G S+ YL  +L    + PFT + IMP NK L      AD Q E   VT L+  W + HA R  F+   F
Sbjct:    4 LLQILATLSTGLFCGAAAYINLVEHPARMACGTELAYCQWQPSYRRATRM--QASLALAGTLFGLLAWWQGASIAYLLGSLALFAVVPFTFIVIMPVNKAL----QQADVQTERTRVTSLLARWDRLHAFRTLFSLLAF 136          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A383WI87 (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WI87_TETOB)

HSP 1 Score: 64.3 bits (155), Expect = 5.030e-10
Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 0
Query:   10 LLEVGATV----ATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLV---PLLIACSRFSGKSLYLGAALPFALIA---PFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVRVFFAFSGFACTVSACALLEKR 158
            L+EVGA      A G+ AG   +IT VE P+  K S  +   ++   FPRA  L    GL ++     ++A ++       L   L   L+    P+T LA+MPTNKK+L      D+K+E   + L+  W + H+VR   + S FA  V   A L KR
Sbjct:    4 LVEVGAAAVALAAAGVFAGSALFITAVEHPAAMKDSCSNFYSYFTQMFPRAARL--QGGLAILGSHAAMVAAAKSPDSDAKLLWGLSSGLLGAVWPWTLLAMMPTNKKILK----QDEKDETVQSALLTKWGQLHSVRTVLSMSAFA--VMLAAALRKR 154          
BLAST of Ggra5923.t1 vs. uniprot
Match: DUF1772 domain-containing protein n=1 Tax=Aquabacter cavernae TaxID=2496029 RepID=UPI000F8ECCB7 (DUF1772 domain-containing protein n=1 Tax=Aquabacter cavernae TaxID=2496029 RepID=UPI000F8ECCB7)

HSP 1 Score: 62.4 bits (150), Expect = 2.050e-9
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 0
Query:   17 VATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRF--SGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVR 137
            V   L  G   YI LVE P+RA L    QL+ W+ ++ R  A+   A L ++ L++    F  +G+  +L   +      P+T +AIMPTN +L+     +D +  E+   LI  WA+ H VR
Sbjct:    9 VVAALFTGAALYINLVEHPARAMLDPAAQLREWKPSYRRGFAM--QASLAVLGLVLGIGAFFATGQWRFLAGGVLLGGNWPYTLIAIMPTNARLMAM---SDAEAGEDSARLIDNWAQLHMVR 126          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A6J4R2S8 (Uncharacterized protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4R2S8_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 3.200e-9
Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = 0
Query:    6 TYVRLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMAL-FKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVR 137
            T   L ++ AT+++GL  G   YI LVE P+R +      L  +  ++ RA  +    A    +  LIA    S     +G  L  A+I PFTAL IMPTNKKLL    PA   + ++   L+  W + HAVR
Sbjct:   17 TLDALAKLIATLSSGLFTGASVYINLVEHPARMQTGIRPALTEFAPSYHRATVMQVSLAVASFLSALIAWRSSSDARWLIGGGLLVAVI-PFTALVIMPTNKKLL---DPAMANDLDQAEKLLTRWGRLHAVR 145          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A418XCQ8 (DUF1772 domain-containing protein n=1 Tax=Pseudomonas sp. K1S02-6 TaxID=2320866 RepID=A0A418XCQ8_9PSED)

HSP 1 Score: 61.6 bits (148), Expect = 4.360e-9
Identity = 39/129 (30.23%), Postives = 58/129 (44.96%), Query Frame = 0
Query:    9 RLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMALFKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVR 137
            ++++  AT  T + AG   YIT+ E P+R        L  W  ++ RA  +  P  L+ +   +A            A L    + PFT +A+MPTN+KLL     A   E      L+  W K HA+R
Sbjct:    3 QIVQFLATFCTSIFAGAAIYITVAEHPARMLGDTRSALTQWAPSYKRATLMQAPLALVGLVTSVAAWWLGAGXXXXXAGLLIGAVVPFTLIAVMPTNRKLLATDRDAASAETRI---LLDRWGKLHAIR 128          
BLAST of Ggra5923.t1 vs. uniprot
Match: A0A6J4R8C0 (Uncharacterized protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4R8C0_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 8.740e-9
Identity = 50/135 (37.04%), Postives = 66/135 (48.89%), Query Frame = 0
Query:    6 TYVRLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWRTTFPRAMAL---FKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALAIMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVR 137
            T   L E+ AT+++GL  G   YI LVE P+R +      L  +  ++ RA         AG L    L+A    S     +G  L  ++I PFTALAI+PTNKKLL    P   K+      L+  W K HAVR
Sbjct:   17 TATALAELIATLSSGLFTGASVYINLVEHPARMQTGIRPALTEFAPSYHRATVTQVSLAIAGFL--GALVAWRSRSDARWLIGGGLLVSVI-PFTALAILPTNKKLL---DPETAKDLALAEKLLNRWGKLHAVR 145          
The following BLAST results are available for this feature:
BLAST of Ggra5923.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J3Y27.710e-7170.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A192IEM52.510e-1132.62Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A2V7QC907.410e-1134.62DUF1772 domain-containing protein n=1 Tax=Gemmatim... [more]
A0A7J7IQV72.320e-1031.11Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
DUF1772 domain-containing protein n=1 Tax=Bowmanella dokdonensis TaxID=751969 RepID=UPI0019D3E6C92.690e-1035.25DUF1772 domain-containing protein n=1 Tax=Bowmanel... [more]
A0A383WI875.030e-1033.96Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
DUF1772 domain-containing protein n=1 Tax=Aquabacter cavernae TaxID=2496029 RepID=UPI000F8ECCB72.050e-933.33DUF1772 domain-containing protein n=1 Tax=Aquabact... [more]
A0A6J4R2S83.200e-936.09Uncharacterized protein n=1 Tax=uncultured Rubroba... [more]
A0A418XCQ84.360e-930.23DUF1772 domain-containing protein n=1 Tax=Pseudomo... [more]
A0A6J4R8C08.740e-937.04Uncharacterized protein n=1 Tax=uncultured Rubroba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08592DUF1772coord: 24..150
e-value: 1.6E-21
score: 77.0
NoneNo IPR availablePANTHERPTHR36535YALI0E30327Pcoord: 3..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..51
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:546593..547072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5923.t1Ggra5923.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 546593..547072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5923.t1 ID=Ggra5923.t1|Name=Ggra5923.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MTMGITYVRLLEVGATVATGLTAGGMSYITLVEAPSRAKLSAVDQLQHWR
TTFPRAMALFKPAGLLLVPLLIACSRFSGKSLYLGAALPFALIAPFTALA
IMPTNKKLLTCPSPADQKEEEEVTGLIQTWAKRHAVRVFFAFSGFACTVS
ACALLEKRV*
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