Ggra5917.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5917.t1
Unique NameGgra5917.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length576
Homology
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A2V3J3X4 (Polyketide_cyc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X4_9FLOR)

HSP 1 Score: 292 bits (747), Expect = 4.480e-92
Identity = 143/190 (75.26%), Postives = 167/190 (87.89%), Query Frame = 0
Query:  382 SVQAAIPTPRTRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECERRRRSAVASSRREQLSRTNK 571
            ++ +  P+ + +VTI+APESNRRL+SACNLINAPL  VW LLSDY+NL+THIPNL++SE+  HP+GGIRV Q GAQ I GFQFRASL MDM EVN +SS WRAINFDLV+SRDFRQFEGVWRME+VD ++TALYYTVSIVPKGLVPVKAIEWRI+EDVP+NMDAVR ECERRRR AVA+ RR+QL+R NK
Sbjct:   58 AIPSGSPSSKVQVTIQAPESNRRLISACNLINAPLQIVWDLLSDYSNLSTHIPNLVISEQTNHPSGGIRVIQSGAQRILGFQFRASLTMDMTEVNPTSSKWRAINFDLVTSRDFRQFEGVWRMERVDSTRTALYYTVSIVPKGLVPVKAIEWRIAEDVPQNMDAVRRECERRRRVAVAAGRRQQLARANK 247          
BLAST of Ggra5917.t1 vs. uniprot
Match: R7QCL7 (Polyketide_cyc domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCL7_CHOCR)

HSP 1 Score: 251 bits (642), Expect = 1.740e-76
Identity = 123/174 (70.69%), Postives = 141/174 (81.03%), Query Frame = 0
Query:  386 AIPTPRTRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECERRRRSAVA 559
            ++PT R +V IEAP  NRR +SA NLI APL  VW LLSDY  LA HIPNL +S  + HP  GIRVEQCG+Q I GF+FRASL MDM EVN +SS+WRAI FDLVSSRDF +FEGVWRME+VD ++TALYY VSIVP+GLVPV+AIEWRISEDVP NM+AVR ECERRRR+  A
Sbjct:   58 SLPTGRVKVIIEAPAPNRRHISASNLIQAPLEIVWELLSDYDRLADHIPNLALSNLKAHPRNGIRVEQCGSQKILGFEFRASLTMDMTEVNRTSSDWRAIEFDLVSSRDFNKFEGVWRMERVDQNRTALYYNVSIVPRGLVPVRAIEWRISEDVPGNMNAVRTECERRRRNRTA 231          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A1X6P5E5 (Polyketide_cyc domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5E5_PORUM)

HSP 1 Score: 182 bits (463), Expect = 1.100e-49
Identity = 97/180 (53.89%), Postives = 121/180 (67.22%), Query Frame = 0
Query:  384 QAAIPTPRTRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECERRRRSAVASSRR 563
            +A+  T R  V I AP  N+R + +  LI A L TVW+ L+DY+ L+T IPNL  S++R HP GGIR+EQ G Q I GFQF+A++V+DM EV A+ S  RAI+F L SSRDF  F G WRM  V+   T L Y V+I PKGLVPVKA+EWRI EDVP N+ AVR  CE   R + A+  R
Sbjct:   91 EASSGTRRPDVAISAPAWNKRTIRSAILIRASLPTVWSALTDYSRLSTFIPNLAYSKQRFHPTGGIRLEQWGVQRIVGFQFKAAVVLDMTEVTATDSKERAIDFVLASSRDFAAFFGTWRMSAVEGGGTWLEYDVNIQPKGLVPVKAVEWRIKEDVPSNLLAVRSYCELLDRRSTAAEMR 270          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S0ZKY6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKY6_9RHOD)

HSP 1 Score: 169 bits (429), Expect = 1.970e-45
Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 0
Query:  394 VTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECER 552
            V IE P+ N R V     I+APLA VW +L+ Y  LA  +PNL +S +R HP+GGIRVEQCG QSI GFQF+AS+VMDM E+   +S  R I F +V SRDF++FEG W + +V+   T L Y+V+I P+GLVPV A+EWRI EDVP N+ AV+  CE+
Sbjct:   61 VQIEKPDRNTRTVKCGVRISAPLAVVWDVLTAYDQLAEVVPNLAISRQRAHPHGGIRVEQCGVQSILGFQFKASVVMDMQEI-FDNSKCRRIVFSMVDSRDFKRFEGTWAVWQVNPRVTRLTYSVTISPRGLVPVSAVEWRIMEDVPTNLAAVKNACEK 218          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S3A1M1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1M1_9RHOD)

HSP 1 Score: 167 bits (424), Expect = 9.160e-45
Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 0
Query:  393 RVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVD-DSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECE 551
            +V I+ P +N+R +S+  +I      VW +L+DY  LA  IPNL +S RR HPNGGIR+EQCG QSI GF+F+AS+V+DM+EVN +  + R I F +  SRDF++F G W ++ V+ D  T L Y VSIVPKGLVPV  +EWRI EDVP N+ +V+ + E
Sbjct:   43 KVDIQRPAANKRKISSSIVIQEATPVVWKVLTDYNRLAEFIPNLAISRRRFHPNGGIRIEQCGVQSILGFEFKASVVLDMLEVNKNKMD-REIRFQMHDSRDFKEFSGKWALKSVNNDRDTLLSYEVSIVPKGLVPVNLVEWRIKEDVPVNLRSVKSKSE 201          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A5J4Z149 (Polyketide_cyc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z149_PORPP)

HSP 1 Score: 157 bits (397), Expect = 1.450e-40
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0
Query:  394 VTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECE 551
            V IE P  + R+V +   I APL+ VW +L+ Y  LA  +PNL +S     PNG IR+EQCG Q I GF+F+A++ MDM E N  + N R+I F L +SRDF++FEGVW + K++D  T L Y V I PKG VPV A+EWRI EDVP N+ AV+  CE
Sbjct:   89 VQIERPNRDTRVVKSGIRIAAPLSCVWDVLTAYNQLADVVPNLAVSRLVPAPNGIIRLEQCGVQKILGFEFQAAVTMDMTEQNKDNDNLRSIVFRLAASRDFKRFEGVWFLTKINDRFTKLNYEVLISPKGFVPVSAVEWRIKEDVPANLLAVKRACE 246          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S4F7D7 (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7D7_CHRCT)

HSP 1 Score: 154 bits (389), Expect = 2.900e-39
Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 0
Query:  392 TRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIE-VNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVD-----------DSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAV 546
            T V I     N R +SA  +INAP   VW +++DY NL+TH+PNL+ SERR HP+GGIR+ Q GAQ I GF FRASL MDM E +N S     A+ F LV SR F  FEGVWR++              D  T L+Y V I PKGLVPV A+EWRI E +  N+ +V
Sbjct:   60 TPVNIAVTGFNSRCISASTIINAPPKAVWKIITDYDNLSTHVPNLVTSERRPHPSGGIRLFQEGAQKIAGFDFRASLTMDMHEDLNDSRRGKMAVEFKLVESRMFAAFEGVWRLQPYSRVRSTTNPDQYDYTTKLFYQVDITPKGLVPVPALEWRIRETLAHNLQSV 226          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S0JC23 (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC23_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 1.850e-37
Identity = 88/185 (47.57%), Postives = 110/185 (59.46%), Query Frame = 0
Query:  380 LLSVQAAIPTPRTRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNW-RAINFDLVSSRDFRQFEGVWRM-------EKVDDSK----TALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLECER 552
            L S  +A+P     V I     N R +SA  ++ A    VW +L+DY NLATH+PNL+ SE R HP GGIR+ Q GAQ I GF FRASL MDM E+   +    R+I F LV S  F  F GVWR+        + D +K    T L+Y V I PKGLVPV A+EWRI EDVP N+ +V++  ER
Sbjct:   69 LSSANSAVP-----VNIAMTGFNSRSISASIIVAAAPEDVWTILTDYDNLATHVPNLVKSELRPHPTGGIRLFQEGAQKIVGFDFRASLTMDMRELTDDARRGQRSIEFKLVDSLMFAAFNGVWRLAPYSRAPSRTDPTKYEYTTKLFYMVDITPKGLVPVPALEWRIREDVPINLQSVKIAAER 248          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S4BWA2 (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BWA2_CHRCT)

HSP 1 Score: 149 bits (377), Expect = 2.610e-37
Identity = 82/158 (51.90%), Postives = 98/158 (62.03%), Query Frame = 0
Query:  392 TRVTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIE-VNASSSNWRAINFDLVSSRDFRQFEGVWRMEKVD-----------DSKTALYYTVSIVPKGLVPVKAIEWRISE 537
            T V I     N R +SA  +INAP   VW +++DY NL+TH+PNL+ SERR HP+GGIR+ Q GAQ I GF FRASL MDM E +N S     A+ F LV SR F  FEGVWR++              D  T L+Y V I PKGLVPV A+EWRI E
Sbjct:   60 TPVNIAVTGFNSRCISASTIINAPPKAVWKIITDYDNLSTHVPNLVTSERRPHPSGGIRLFQEGAQKIAGFDFRASLTMDMHEDLNDSRRGKMAVEFKLVESRMFAAFEGVWRLQPYSRVRSTTNPDQYDYTTKLFYQVDITPKGLVPVPALEWRIRE 217          
BLAST of Ggra5917.t1 vs. uniprot
Match: A0A7S3EU61 (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EU61_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 3.950e-37
Identity = 83/166 (50.00%), Postives = 102/166 (61.45%), Query Frame = 0
Query:  394 VTIEAPESNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIRVEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRA-INFDLVSSRDFRQFEGVWRME-------KVDDSK----TALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVR 547
            V I     N R +SA  ++NA    VW +LSDY NL+ H+PNL++SE R HP GGIRV Q GAQ I GF FRASL MDM E+        + I F LV S  F  F+G WR++       KVD +K    T L Y V+I PKG+VPV A+EWRI EDVP N+ AV+
Sbjct:   35 VDIAVTGMNSRCISAQIVVNAAPDVVWGILSDYDNLSVHVPNLVVSETRPHPTGGIRVFQEGAQKIVGFDFRASLTMDMAEITEEGRTQPSRIKFTLVDSAMFSAFDGEWRLQPYSRMRSKVDPTKYDYTTKLMYRVNITPKGIVPVPALEWRIREDVPVNLIAVK 200          
The following BLAST results are available for this feature:
BLAST of Ggra5917.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3X44.480e-9275.26Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
R7QCL71.740e-7670.69Polyketide_cyc domain-containing protein n=1 Tax=C... [more]
A0A1X6P5E51.100e-4953.89Polyketide_cyc domain-containing protein n=1 Tax=P... [more]
A0A7S0ZKY61.970e-4554.72Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S3A1M19.160e-4551.88Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z1491.450e-4051.27Polyketide_cyc domain-containing protein n=1 Tax=P... [more]
A0A7S4F7D72.900e-3950.30Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S0JC231.850e-3747.57Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A7S4BWA22.610e-3751.90Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S3EU613.950e-3750.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 412..547
e-value: 3.6E-12
score: 46.6
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 407..552
e-value: 9.9E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR34060POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 382..556
NoneNo IPR availablePANTHERPTHR34060:SF1POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 382..556
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..575
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 409..553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:523678..525951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5917.t1Ggra5917.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 523678..525951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5917.t1 ID=Ggra5917.t1|Name=Ggra5917.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=576bp
MLLKACLVSVIVSVFTAGVIAAPLPEKVSEDRSAVPVEPENESARLRRYG
DIGLQPQKVVRYQPVECIHPDSAPYLPRQVLENSALIPGSVAQATQGGVA
AGGEVAPNAMTGGVVPGGDANAAAAGAMGSVATHLATGGGTIGAGVTASS
EGSAGVMNAGSQVGAGSGVAAGGTIDGMTAAASAPLGGVAAGGIAAGGVG
AGGVAHNTQVAWNGAPQADTTNAAAITAGGDQAVAGGPAPEAGAQTAMTG
AVGATNDMVANVAPTMDQSGGGAGDAGAMTGVSVNAVSAPVGVEGGAMGV
APGAEVATGGVGGNVLVSTAACASFLVSARYDMAATAAYVTQPAFRPSRV
LRRSASPAAQRRTCVITMRRARAVQRESSLLSVQAAIPTPRTRVTIEAPE
SNRRLVSACNLINAPLATVWALLSDYANLATHIPNLLMSERRMHPNGGIR
VEQCGAQSIFGFQFRASLVMDMIEVNASSSNWRAINFDLVSSRDFRQFEG
VWRMEKVDDSKTALYYTVSIVPKGLVPVKAIEWRISEDVPENMDAVRLEC
ERRRRSAVASSRREQLSRTNKSRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005031COQ10_START
IPR023393START-like_dom_sf