Ggra5916.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5916.t1
Unique NameGgra5916.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length512
Homology
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A2V3J332 (Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J332_9FLOR)

HSP 1 Score: 422 bits (1085), Expect = 4.480e-135
Identity = 316/567 (55.73%), Postives = 361/567 (63.67%), Query Frame = 0
Query:    1 MHMNRPDFPSPPPPVALPHPA-PVSAAPPSLP-AHSXXXXXXXXXXXSTSVATLNLPLPYQPASHF--APVKPQXXXXXXXXXXXXXXXXXHDVVAVTRPLPSPQLDGAPXXXXXSLKSDQVLQKPSVNHNVYASSNMPTVTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------PLLQPHDSLPHPLSSAHLSSQVSSDITSPGILSGAVDKRRKARANRVISYDSAMLSNDDATTMMMAAHHASHLPSPTDAAVAALTSSHPVYEADGIQFKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTEYAEGPIPRRKVPVTKAEKEKAAGDVRHLTNALQQRPHSHSLSSHYSSVAASA--HARGAVSNAALHALGASPSLPPAFGSRFPDVRGVYGAP-------MAHHAA---------TVHHGAHGGDAPTTHAEEHDETTGISSSALLSVPEMHVPNHLLSISHTIGEE 511
            M +NRP+FPSPP PV+LP  A PVSA+  SLP +H+      XXXXX          LPY   SH   A  KP                       ++R LP P  D +        + D  L+K S N N+Y SSNMPT+T L              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  PLLQP ++L HPLS+ HLS+ VSSD+ SPGILSGAV KRRK+R + +++YDS++LS           HHASH+PS TDAAVAALTS+ PVYEADGIQFKLL QLPDQKIKRLR       E LTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYA+LFH +DPEYDIAKFKPTEYA+GPIPRRKVPV+KAEKEKAAGD++ L +ALQQRPHSHSL++HYSSVA +A  HAR  +  + L  LGASP L  +F SRFPDVRG+YG           H+A+          V   AHGGD       EHD  TGIS+S LLSVPEMHVPNHLLSISH IG+E
Sbjct:  365 MQLNRPEFPSPPAPVSLPPSAVPVSASNTSLPISHASVPHSLXXXXXXXXXXXXXXXLPYH-TSHISSAAAKPLHSPDPEAQRHRPTSHPQD----LSRSLPLPHQDVSHH------RLDPPLEKRSSNPNLYVSSNMPTITSLTPIPNLHHGLQSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMAPLLQPQEALHHPLSAGHLSAHVSSDLNSPGILSGAVHKRRKSRKSPMLTYDSSILSXXXXXXXXXXXHHASHIPSATDAAVAALTSTQPVYEADGIQFKLLSQLPDQKIKRLRXXXXXXXEDLTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYAALFHASDPEYDIAKFKPTEYADGPIPRRKVPVSKAEKEKAAGDLKQLVSALQQRPHSHSLNAHYSSVAGAAGGHARS-MGGSGLQPLGASPQLAASFASRFPDVRGMYGGAGGSGTCQQTHNASGCGATAPSSLVASQAHGGD-------EHDAGTGISTSELLSVPEMHVPNHLLSISHAIGDE 912          
BLAST of Ggra5916.t1 vs. uniprot
Match: R7QFX0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFX0_CHOCR)

HSP 1 Score: 285 bits (730), Expect = 3.160e-88
Identity = 179/320 (55.94%), Postives = 217/320 (67.81%), Query Frame = 0
Query:  196 LSSAHLSSQVSSDITSPGILSGAVDK-RRKARANRVISYDSAMLSNDDATTMMMAA--HHASHLPSPTDAAVAALTSSHPVYEADGIQFKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTEYAEGPIPRRKVPVTKAEKEKAAGDVRHLTNALQQRPH-SHSLSSHYSSVAASAHARGAVSNAALHALGASPSLPPAFGSRFPDVRGVYGAPMAHHAATVHHGAHGGDAPTTHAEEHDETTGISSSALLSVPEMHVPNHLLSISHTIGEE 511
            LS++HLS+   S    P +LSGA+DK RR+ R  R   Y + +   DDA TMMMAA  H A  L + +D     L+ S P YEADGIQFK+LEQLPD KI RL+ EKIKPIE+LTF+DIK YNRNQLRAYCSVYGIRRKKKA+MERDMARYA+LFHPNDP YD +KF PTEYA+GPIPRRK+PVTK +KE AAGD++ LTNALQQRP  S +   HY S   S      +SN+  H L   P+   +  SR  D+ G++    AH   T H G HGG     H +  D    + ++ L+SVPEM VPNHLL I++ IGEE
Sbjct:  105 LSNSHLSNHFGS----PALLSGAIDKKRRQLRKPRTSPYGAIL--GDDAQTMMMAAQSHAAQTLAAHSDP--TGLSHSVPTYEADGIQFKILEQLPDTKINRLKTEKIKPIESLTFSDIKAYNRNQLRAYCSVYGIRRKKKAEMERDMARYAALFHPNDPAYDFSKFAPTEYADGPIPRRKIPVTKEQKELAAGDMKRLTNALQQRPQPSVASQQHYGS---SNTTHPGLSNS--HGLHHHPTSVVSSASRLHDIHGMHST--AH--TTQHLGTHGG-----HHDNEDHGV-VGATDLMSVPEMQVPNHLLQITNQIGEE 401          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A7S2ZWM8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWM8_9RHOD)

HSP 1 Score: 124 bits (310), Expect = 4.330e-28
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0
Query:  267 LTSSHPVYEADGIQFKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTEYA 365
            +T S    + DGI+FK  ++L   K KRL +EKIKPIE LTF DIK YNRNQLRAYCSVYG++RK K +ME D+A+Y  LFHP+D EY + KF+P +YA
Sbjct:   54 MTDSTDYPQLDGIEFKRADRLSSPKRKRLLEEKIKPIEELTFDDIKKYNRNQLRAYCSVYGVKRKSKGEMEYDLAKYVQLFHPDDVEYQLNKFQPRKYA 152          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A7S2ZJT0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJT0_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 5.380e-25
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query:  284 LEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTE 363
            + QLPD +++RL +  IKP+E LTF DI+ Y+R+QLRAYC VYG+ RKKK +ME DMARYAS FHPNDPEYDI+K+ P E
Sbjct:   47 VSQLPDIRVQRLNEMDIKPVEELTFEDIRNYSRDQLRAYCYVYGVLRKKKFEMELDMARYASYFHPNDPEYDISKYVPKE 126          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A7S2ZIC3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIC3_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 2.260e-24
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query:  284 LEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTE 363
            + QLPD +++RL +  IKP+E LTF DI+ Y+R+QLRAYC VYG+ RKKK +ME DMARYAS FHPNDPEYDI+K+ P E
Sbjct:   47 VSQLPDIRVQRLNEMDIKPVEELTFEDIRNYSRDQLRAYCYVYGVLRKKKFEMELDMARYASYFHPNDPEYDISKYVPKE 126          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A7S2ZKW1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKW1_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 9.320e-24
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query:  284 LEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTE 363
            + QLPD +++RL +  IKP+E LTF DI+ Y+R+QLRAYC VYG+ RKKK +ME DMARYAS FHPNDPEYDI+K+ P E
Sbjct:   47 VSQLPDIRVQRLNEMDIKPVEELTFEDIRNYSRDQLRAYCYVYGVLRKKKFEMELDMARYASYFHPNDPEYDISKYVPKE 126          
BLAST of Ggra5916.t1 vs. uniprot
Match: M2XRR6 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR6_GALSU)

HSP 1 Score: 110 bits (276), Expect = 1.150e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0
Query:  277 DGIQFKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPTE 363
            D I+F+L + L + K +RL +  +KP+E +TF ++K+YNR+QLRAYC +YGI RKKKA+ME DMARYAS FHP DP YD+A F+  E
Sbjct:   24 DNIEFRLKDDLSEPKRRRLDERGVKPVEEVTFAELKSYNRDQLRAYCYIYGIPRKKKAEMELDMARYASAFHPGDPSYDLATFENVE 110          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A2V3J1V4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1V4_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 2.180e-14
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 0
Query:  272 PVYEADGIQFKL-------LEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKPT 362
            PV EA G+  ++         QL D K  RL D+K+ P E LTF +++TYNR+QLRAYC  YG+ R+KK +ME DMARY S ++   P + I ++ PT
Sbjct:  612 PVMEAKGLVMRVGNAVFVTENQLDDLKTARLNDKKVLPFEKLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPGFAIHEYIPT 709          
BLAST of Ggra5916.t1 vs. uniprot
Match: A0A7S2ZW48 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZW48_9RHOD)

HSP 1 Score: 77.8 bits (190), Expect = 1.580e-13
Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 0
Query:  267 LTSSHPVYEADGIQFKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYG 327
            +T S    + DGI+FK  ++L   K KRL +EKIKPIE LTF DIK YNRNQLRAYCSVYG
Sbjct:   54 MTDSTDYPQLDGIEFKRADRLSSPKRKRLLEEKIKPIEELTFDDIKKYNRNQLRAYCSVYG 114          
BLAST of Ggra5916.t1 vs. uniprot
Match: R7QSD5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSD5_CHOCR)

HSP 1 Score: 80.9 bits (198), Expect = 2.290e-12
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 0
Query:  281 FKLLEQLPDQKIKRLRDEKIKPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPNDPEYDIAKFKP 361
            F   +QL D K +R+R + +KPIE LTF DI +YNR+QLR YC +Y   R+KK++ME DMAR+ SL++   P +  A++ P
Sbjct:  344 FVTADQLEDIKRQRMRGKNLKPIEELTFQDILSYNRDQLRCYCYIYSTPRRKKSEMEVDMARFVSLWNEGKPGFVFAEYIP 424          
The following BLAST results are available for this feature:
BLAST of Ggra5916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3J3324.480e-13555.73Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Grac... [more]
R7QFX03.160e-8855.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZWM84.330e-2859.60Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZJT05.380e-2565.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZIC32.260e-2465.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZKW19.320e-2465.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2XRR61.150e-2357.47Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A2V3J1V42.180e-1445.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZW481.580e-1363.93Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7QSD52.290e-1248.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:510249..511784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5916.t1Ggra5916.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 510249..511784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5916.t1 ID=Ggra5916.t1|Name=Ggra5916.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=512bp
MHMNRPDFPSPPPPVALPHPAPVSAAPPSLPAHSSAPHSLPLHLPSTSVA
TLNLPLPYQPASHFAPVKPQPAPDPDSNRARAPAPLPHDVVAVTRPLPSP
QLDGAPPPPPPSLKSDQVLQKPSVNHNVYASSNMPTVTPLTPMPNLHALH
SLHALPAMHSFSSMPSIPPMPSMAHMSSMPSMPPLLQPHDSLPHPLSSAH
LSSQVSSDITSPGILSGAVDKRRKARANRVISYDSAMLSNDDATTMMMAA
HHASHLPSPTDAAVAALTSSHPVYEADGIQFKLLEQLPDQKIKRLRDEKI
KPIEALTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYASLFHPN
DPEYDIAKFKPTEYAEGPIPRRKVPVTKAEKEKAAGDVRHLTNALQQRPH
SHSLSSHYSSVAASAHARGAVSNAALHALGASPSLPPAFGSRFPDVRGVY
GAPMAHHAATVHHGAHGGDAPTTHAEEHDETTGISSSALLSVPEMHVPNH
LLSISHTIGEE*
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