Ggra5865.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5865.t1
Unique NameGgra5865.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A2V3INQ2 (Putative Golgi transport protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ2_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 7.550e-84
Identity = 133/143 (93.01%), Postives = 142/143 (99.30%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPV 143
            MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFF GMA+VLFGLP++GMA+ELFGF+NLFGDFFPVVIAFLRRAPVFG+LLGLPIVRN+ADRLAGS++KLPV
Sbjct:   87 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAVVLFGLPVLGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGRLLGLPIVRNVADRLAGSSSKLPV 229          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A1X6PC43 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC43_PORUM)

HSP 1 Score: 172 bits (437), Expect = 2.360e-51
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 0
Query:    9 DVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPV 143
            D +KIGIGLT+FGLAF +LGV L FDK LLAMG++L+LAGV +IIG  RS RFFFQ++KAK S  FF GM LVL G P+IGM +E+FGFINLFGDFFP+ IAFLRR P+ G  + LP VR + D+LA S  KLPV
Sbjct:    3 DFKKIGIGLTSFGLAFMILGVLLLFDKALLAMGDLLFLAGVTLIIGVQRSYRFFFQRKKAKGSALFFGGMLLVLVGWPVIGMGVEVFGFINLFGDFFPIAIAFLRRMPIVGNFMTLPGVRVVVDKLAASPPKLPV 137          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A7S0EAX9 (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EAX9_9EUKA)

HSP 1 Score: 164 bits (415), Expect = 1.240e-47
Identity = 85/138 (61.59%), Postives = 103/138 (74.64%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPV 143
            A+ D RKIGIGLT  GL F VLG+ +FFDKGLLAMGN+L+LAGVMMIIG  ++ RFFFQKRK K +  F  G+ LVL G P+IGM +E FGF+NLFGDFFP+ + FLR  PV G LL LPI+R++ DR      +LPV
Sbjct:   30 AMDDYRKIGIGLTGAGLLFMVLGMMMFFDKGLLAMGNILFLAGVMMIIGMNKTFRFFFQKRKLKGTACFLGGIGLVLLGWPVIGMGVEGFGFLNLFGDFFPIALGFLRNMPVVGSLLNLPIIRSVTDRFV-QKARLPV 166          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A7S2ZZF7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZF7_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 2.300e-46
Identity = 80/137 (58.39%), Postives = 103/137 (75.18%), Query Frame = 0
Query:    7 ITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPV 143
            I D +KIGIGLTA GL F+ LG+ L FD  L+AMGN+L+L+GV ++IGP RSV FFFQK+K K S+ FF G+ALVL   P+IG+ +E FGFINLFGDFFP+ + FLRR P+ G LL LP + ++ D+   S+ KLPV
Sbjct:    2 IQDFKKIGIGLTACGLGFTFLGIILIFDAALIAMGNILFLSGVTLVIGPQRSVTFFFQKKKLKGSIVFFVGIALVLIKWPVIGILVESFGFINLFGDFFPIAVTFLRRLPIIGNLLSLPYISDLVDKFVASS-KLPV 137          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A2V3INN9 (Uncharacterized protein ycf18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INN9_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 3.250e-46
Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 0
Query:  111 FLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPVPLCKRPRSPPKHKNPLFPRAVYQPSDEDKAEALPETPNELTLAQQLLMKQYEEQVERMSGDECRKLAVEVARQMMVKDNIMKKMLNRDVNFGVEPPDPDDMQND 247
            F+   P+F +   +P  R+              PL KRPR P     P FPRAVY+PS+ED+ E LPE PN+LTLAQQLLMKQY EQV+RMS +ECRKLAVE+ RQMMVKDNIMKKMLNR+V+FGVEPPDPDD+Q+D
Sbjct:   11 FILALPLFPRAPSIPSPRH-------------TPLAKRPRPPSPQTAPCFPRAVYKPSEEDRGEPLPEIPNQLTLAQQLLMKQYAEQVQRMSSEECRKLAVEIVRQMMVKDNIMKKMLNRNVDFGVEPPDPDDVQDD 134          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A5J4YNX5 (Vesicle transport protein GOT1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNX5_PORPP)

HSP 1 Score: 159 bits (401), Expect = 7.860e-46
Identity = 80/140 (57.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTK 140
            M+ P  I+D +KIGIGLT FG+ F+ LGV L FDK LLAMGNV++L+GV +IIG  R+VRFFF +++ K S FFF GM LVL G PIIG+ +E +GF+NLFGDFFPV + F++  PV G +L +P V+ + DRL G  TK
Sbjct:    1 MAEPM-ISDFKKIGIGLTGFGMGFTFLGVLLLFDKSLLAMGNVMFLSGVGLIIGAQRAVRFFFTRKRYKGSAFFFGGMTLVLVGWPIIGICLEAWGFVNLFGDFFPVALTFMQNMPVIGNILAMPAVQQVVDRLMGLNTK 139          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A7S3W5F4 (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5F4_9SPIT)

HSP 1 Score: 157 bits (398), Expect = 1.850e-45
Identity = 85/138 (61.59%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPV 143
            A+ D RKIG+GLT  G+ F VLGV LFFDKGLLAMGN+L+LAGV +IIGP    RFFFQKRK + +  F  G+ LVL G P+ GMAIELFGF+NLFGDFFPVV+ FLR  P+ G +L LP VR   DR      +LPV
Sbjct:    1 AMDDYRKIGLGLTCAGVLFLVLGVMLFFDKGLLAMGNILFLAGVSLIIGPRGVFRFFFQKRKVRGTSCFLGGIFLVLVGWPVFGMAIELFGFLNLFGDFFPVVLGFLRNLPIVGNVLALPPVRAFTDRFVAKA-RLPV 137          
BLAST of Ggra5865.t1 vs. uniprot
Match: vesicle transport protein GOT1B n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FD684 (vesicle transport protein GOT1B n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FD684)

HSP 1 Score: 157 bits (397), Expect = 2.870e-45
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTK 140
            F ITDV+KIG+GL  FG+AF  LGV L FDKGLLA+GN+L+++G+  +IG  R+ RFFFQ+ K +ASV FF G+ +VLFG P++GM IE +GF+ LF  FFPV I FLRR PV G +L LP +R I D+LAG +++
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVLLLFDKGLLALGNILFISGLACVIGLERTFRFFFQRHKVRASVAFFAGILVVLFGWPLVGMLIETYGFVLLFSGFFPVAINFLRRVPVLGTVLNLPGIRGIIDKLAGDSSR 137          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A7S0LLP3 (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLP3_9EUKA)

HSP 1 Score: 157 bits (398), Expect = 3.240e-45
Identity = 80/126 (63.49%), Postives = 96/126 (76.19%), Query Frame = 0
Query:    9 DVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRL 134
            D RKIGIGLT  G+ F  LG+  FFDKGLLAMGN+L+LAGVM+IIG  ++ RFFFQKRK + +  F  G+ LVL G P+IGMAIE FGF+NLFGDFFP+ I F+R  PV G LL LP VR++ DRL
Sbjct:   22 DYRKIGIGLTCAGVLFLTLGMLFFFDKGLLAMGNILFLAGVMLIIGTRKTFRFFFQKRKVRGTSCFLGGIFLVLVGWPVIGMAIEAFGFLNLFGDFFPIAIGFMRNMPVIGNLLSLPFVRSLTDRL 147          
BLAST of Ggra5865.t1 vs. uniprot
Match: A0A1S3DJP2 (vesicle transport protein GOT1B isoform X2 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DJP2_DIACI)

HSP 1 Score: 156 bits (395), Expect = 5.760e-45
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINLFGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGST 138
            F ITDV+KIG+GL  FG+AF  LGV L FDKGLLA+GNVL+++G+  +IG  R+ RFFFQ+ K K S+ FF G+ +VLFG P+IGM IEL+GF +LF  FFPV I FLRR PV G +L LP ++ I DRLAG T
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVFLLFDKGLLAIGNVLFISGLACVIGFERTFRFFFQRHKVKGSLCFFGGIFVVLFGWPLIGMCIELYGFYHLFSGFFPVAINFLRRIPVLGMMLNLPGIKGILDRLAGDT 135          
The following BLAST results are available for this feature:
BLAST of Ggra5865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ27.550e-8493.01Putative Golgi transport protein 1 n=1 Tax=Gracila... [more]
A0A1X6PC432.360e-5165.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0EAX91.240e-4761.59Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2ZZF72.300e-4658.39Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3INN93.250e-4661.31Uncharacterized protein ycf18 n=1 Tax=Gracilariops... [more]
A0A5J4YNX57.860e-4657.14Vesicle transport protein GOT1 n=1 Tax=Porphyridiu... [more]
A0A7S3W5F41.850e-4561.59Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
vesicle transport protein GOT1B n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FD6842.870e-4557.35vesicle transport protein GOT1B n=1 Tax=Schistocer... [more]
A0A7S0LLP33.240e-4563.49Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A1S3DJP25.760e-4560.45vesicle transport protein GOT1B isoform X2 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 18..116
e-value: 9.3E-15
score: 55.1
IPR036904Phycobilisome degradation protein NblA superfamilyGENE3D1.10.287.670Phycobilisome degradation protein NblAcoord: 173..231
e-value: 2.0E-18
score: 68.0
IPR036904Phycobilisome degradation protein NblA superfamilySUPERFAMILY109859NblA-likecoord: 182..230
IPR007574Phycobilisome degradation protein NblAPFAMPF04485NblAcoord: 182..229
e-value: 2.2E-11
score: 44.0
IPR045176Protein transport protein Got1PANTHERPTHR21493CGI-141-RELATED/LIPASE CONTAINING PROTEINcoord: 5..134
NoneNo IPR availablePANTHERPTHR21493:SF9GOLGI TRANSPORT PROTEIN 1-RELATEDcoord: 5..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:196043..198071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5865.t1Ggra5865.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 196043..198071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5865.t1 ID=Ggra5865.t1|Name=Ggra5865.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVM
MIIGPTRSVRFFFQKRKAKASVFFFCGMALVLFGLPIIGMAIELFGFINL
FGDFFPVVIAFLRRAPVFGKLLGLPIVRNIADRLAGSTTKLPVPLCKRPR
SPPKHKNPLFPRAVYQPSDEDKAEALPETPNELTLAQQLLMKQYEEQVER
MSGDECRKLAVEVARQMMVKDNIMKKMLNRDVNFGVEPPDPDDMQND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR036904NblA_sf
IPR007574NblA
IPR045176Got1