Ggra5846.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5846.t1
Unique NameGgra5846.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
BLAST of Ggra5846.t1 vs. uniprot
Match: R7QGN8 (Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QGN8_CHOCR)

HSP 1 Score: 294 bits (753), Expect = 2.610e-99
Identity = 143/164 (87.20%), Postives = 153/164 (93.29%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQACIQMYSE 164
            MGILFS LWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEV+Y+NMRFQVWDLGGQ++LRQTWKTYF+NTHALIMVVDSAD  RLDLAR ELHAVL++DELRDSCVL+ ANKQDLKE++  AELSEALALHTIRTHDWHIQAC  M  E
Sbjct:    1 MGILFSQLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVTYRNMRFQVWDLGGQEVLRQTWKTYFINTHALIMVVDSADSKRLDLARKELHAVLDSDELRDSCVLILANKQDLKEAVGPAELSEALALHTIRTHDWHIQACSAMKGE 164          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A7S0M3R6 (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3R6_9CRYP)

HSP 1 Score: 217 bits (553), Expect = 6.920e-69
Identity = 98/164 (59.76%), Postives = 130/164 (79.27%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQACIQMYSE 164
            MG+ F+ LW+R+   ++ K+C+IGLD AGKT++LYKLHLG+VV T PTIGSNVEE++YKN+RF+ WDLGGQ+ LR TW +YF+NT  +I+VVDS D  R  + R EL  +L  +EL+ +C+LVFANKQDL+E++TAAE+SE L LH IRTH+WHIQAC  +  E
Sbjct:    2 MGVTFAKLWQRLFTSKQYKLCIIGLDNAGKTSLLYKLHLGDVVVTQPTIGSNVEEITYKNIRFECWDLGGQESLRSTWSSYFLNTDGVILVVDSTDRERAPIVRAELGKLLLNEELKQACILVFANKQDLREAMTAAEISEHLQLHAIRTHEWHIQACCALTGE 165          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A7S0ZDI1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDI1_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 1.050e-66
Identity = 98/158 (62.03%), Postives = 127/158 (80.38%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQAC 158
            MG + SS W   SG++E K+CM+GLD AGKT+ILY+LHLGE VSTYPTIGSNVEE+ YK +R  VWDLGGQ  LR+ W+ Y++ + ALIMV+DSAD  RLD+A+ ELH  L ++EL D+ VLV+ANKQDLK +L+A+E+S+ALAL+ ++T  WHIQAC
Sbjct:    1 MGAVLSSFWSLFSGYKEFKVCMVGLDNAGKTSILYRLHLGESVSTYPTIGSNVEELIYKKVRLCVWDLGGQQDLREMWRFYYLESAALIMVIDSADDERLDVAKDELHQALKSEELHDAAVLVYANKQDLKSALSASEISDALALYNLKTQPWHIQAC 158          
BLAST of Ggra5846.t1 vs. uniprot
Match: M2W1U8 (ADP-ribosylation factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1U8_GALSU)

HSP 1 Score: 211 bits (538), Expect = 1.350e-66
Identity = 101/158 (63.92%), Postives = 125/158 (79.11%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQAC 158
            MGI F+ LWR++   +E+KICMIGLD AGKTTILY+LHLG+VV T PTIGSNVE+V  +N+ FQVWDLGGQD LR+ W+TYFVNT A+I V+DS D  R DLAR EL  VL  + L  + +LVFANKQD+K++ +AAE+SE+LALH I+TH W IQ C
Sbjct:    1 MGIWFAKLWRKLYRIQELKICMIGLDNAGKTTILYRLHLGDVVVTTPTIGSNVEQVKCRNLLFQVWDLGGQDSLREAWQTYFVNTQAVIFVIDSCDRERFDLARKELLRVLRFENLSKAVILVFANKQDMKQAASAAEISESLALHDIKTHSWTIQPC 158          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A7S2ZQI4 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQI4_9RHOD)

HSP 1 Score: 208 bits (530), Expect = 2.610e-65
Identity = 99/146 (67.81%), Postives = 124/146 (84.93%), Query Frame = 0
Query:   13 SGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQAC 158
            SG ++VK+ M+GLD AGKTTILYKLHLGE  STYPTIGSNVEEV  +N R QVWDLGGQ MLRQTW+ YFVNT+ +I+V+DSAD  RLD+AR EL  +LN++ELR++ +LVFANKQDLK ++TA E+SEAL+LH+I+  +W+IQAC
Sbjct:   17 SGVKDVKVIMVGLDNAGKTTILYKLHLGEAFSTYPTIGSNVEEVRRQNFRLQVWDLGGQAMLRQTWQMYFVNTNGVILVIDSADPERLDVAREELTNLLNSEELREAAILVFANKQDLKGAVTATEVSEALSLHSIKDREWNIQAC 162          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A6A5C2F4 (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C2F4_NAEFO)

HSP 1 Score: 208 bits (530), Expect = 2.970e-65
Identity = 96/158 (60.76%), Postives = 124/158 (78.48%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQAC 158
            MGILF  LW R+ G  +VKIC++GLD AGKTT LYKLHLGEVV T PTIGSNVEEV+YKN++ Q+WDLGGQ+ LR TW+ YF N+  +I+VVDS D  R+ + + EL  +L   EL+ + +LVFANKQD+K +++AAE+S+AL L  I++HDWHIQAC
Sbjct:    1 MGILFGKLWERLFGDEQVKICIVGLDNAGKTTTLYKLHLGEVVETQPTIGSNVEEVNYKNIKMQMWDLGGQESLRATWQIYFSNSQGIILVVDSTDRQRISIVKEELFRILECMELKGASILVFANKQDVKGAMSAAEVSKALNLQAIKSHDWHIQAC 158          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A022Q8X5 (Uncharacterized protein n=13 Tax=Magnoliopsida TaxID=3398 RepID=A0A022Q8X5_ERYGU)

HSP 1 Score: 207 bits (526), Expect = 9.590e-65
Identity = 94/164 (57.32%), Postives = 129/164 (78.66%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQACIQMYSE 164
            MG L S +W  +   +E KI ++GLD AGKTT LYKLHLGEVV+T+PT+GSNVEE+ YKN+RF+VWDLGGQD LR +W TY+  THA+I+V+DS D  R+ + + EL ++L  ++L+ + VLVFANKQDLK+++T AE+++AL+LH+I+ HDWHIQAC  +  E
Sbjct:    1 MGALMSKMWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIIVIDSTDRARISIMKDELFSLLPNEDLQGAVVLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGE 164          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A2I0XH17 (ADP-ribosylation factor 1 n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0XH17_9ASPA)

HSP 1 Score: 207 bits (526), Expect = 1.130e-64
Identity = 98/164 (59.76%), Postives = 125/164 (76.22%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQACIQMYSE 164
            MG L S  W  +   +E KI ++GLD AGKTT LYKLHLGEVV+T PT+GSNVEEV YKN+RF+VWDLGGQD LR +W TYF  THA+I+V+DS D  R+ + + EL  +L  D+L  S VLVFANKQDLKE+++ AE+++AL+LH+I+ HDWHIQAC  +  E
Sbjct:    1 MGALVSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTNPTVGSNVEEVVYKNIRFEVWDLGGQDRLRTSWATYFRGTHAVIVVIDSTDRARISIMKDELFRLLRHDDLEHSVVLVFANKQDLKEAMSPAEITDALSLHSIKKHDWHIQACCALTGE 164          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A1C7NRH6 (ADP-ribosylation factor-like protein 5A n=7 Tax=Mucorineae TaxID=1344963 RepID=A0A1C7NRH6_9FUNG)

HSP 1 Score: 206 bits (524), Expect = 1.750e-64
Identity = 98/164 (59.76%), Postives = 129/164 (78.66%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQACIQMYSE 164
            MGILFS+LW ++    +VKI ++GLD AGKTTILYKL + +VV+T PTIGSNVEEV YKN+RF +WD+GGQ+ LR TWKTY+V+T A+IMV+DS DV RL LA  ELH ++ +D+L+++ +LVFANKQD+K SL AA++SEAL L  ++   WHIQAC  +  E
Sbjct:    1 MGILFSNLWNKLFSKTQVKIIIVGLDNAGKTTILYKLLMNQVVTTTPTIGSNVEEVEYKNLRFLMWDIGGQESLRSTWKTYYVDTKAVIMVIDSTDVNRLHLAEQELHQMMESDQLQNASLLVFANKQDVKGSLGAAKISEALGLSRLKDRQWHIQACSALTGE 164          
BLAST of Ggra5846.t1 vs. uniprot
Match: A0A7S4BC43 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BC43_CHRCT)

HSP 1 Score: 205 bits (521), Expect = 5.330e-64
Identity = 92/158 (58.23%), Postives = 122/158 (77.22%), Query Frame = 0
Query:    1 MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIGSNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRLDLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRTHDWHIQAC 158
            MG++FSSLW R+ G  E K+ M+GLD AGKTT+LY+LHLG+V+ T PT+GSNVEEV+++N+RFQVWDLGGQD LR+ W TY+V  HA+++VVDS D  RL L R ELH++   +ELR + +LVFANKQDL  ++TA E+++ L LH  + H W IQ C
Sbjct:    1 MGLVFSSLWSRLVGAGEYKVVMVGLDNAGKTTLLYRLHLGDVIETQPTVGSNVEEVTHRNVRFQVWDLGGQDKLRRVWNTYYVGAHAVVLVVDSMDRARLPLLRDELHSICENEELRSAALLVFANKQDLAGAMTAVEITQQLQLHANKQHAWQIQPC 158          
The following BLAST results are available for this feature:
BLAST of Ggra5846.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QGN82.610e-9987.20Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniop... [more]
A0A7S0M3R66.920e-6959.76Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0ZDI11.050e-6662.03Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2W1U81.350e-6663.92ADP-ribosylation factor n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZQI42.610e-6567.81Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A6A5C2F42.970e-6560.76Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A022Q8X59.590e-6557.32Uncharacterized protein n=13 Tax=Magnoliopsida Tax... [more]
A0A2I0XH171.130e-6459.76ADP-ribosylation factor 1 n=2 Tax=Epidendroideae T... [more]
A0A1C7NRH61.750e-6459.76ADP-ribosylation factor-like protein 5A n=7 Tax=Mu... [more]
A0A7S4BC435.330e-6458.23Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 47..71
score: 40.71
coord: 19..42
score: 49.02
coord: 74..99
score: 33.94
coord: 119..140
score: 26.74
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 1..190
e-value: 4.3E-18
score: 76.1
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 8..167
e-value: 4.9E-60
score: 202.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
e-value: 1.1E-68
score: 244.2
NoneNo IPR availablePANTHERPTHR11711:SF375ADP-RIBOSYLATION FACTOR 4B-RELATEDcoord: 1..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..211
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..194
score: 18.75466
NoneNo IPR availableTMHMMTMhelixcoord: 181..203
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 17..145
e-value: 1.0E-19
score: 68.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..175
e-value: 6.0E-58
score: 197.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..158
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:123789..124754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5846.t1Ggra5846.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 123789..124754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5846.t1 ID=Ggra5846.t1|Name=Ggra5846.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MGILFSSLWRRISGFREVKICMIGLDAAGKTTILYKLHLGEVVSTYPTIG
SNVEEVSYKNMRFQVWDLGGQDMLRQTWKTYFVNTHALIMVVDSADVMRL
DLARTELHAVLNTDELRDSCVLVFANKQDLKESLTAAELSEALALHTIRT
HDWHIQACIQMYSELLIAYMQPLFHASVSDTTTMWIFPYMMSALVMLMNY
AGFKAHAALED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF