Ggra5844.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5844.t1
Unique NameGgra5844.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length477
Homology
BLAST of Ggra5844.t1 vs. uniprot
Match: A0A2V3J342 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J342_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 2.930e-93
Identity = 312/479 (65.14%), Postives = 360/479 (75.16%), Query Frame = 0
Query:    1 MGKKKPGQGKKKVVLSLAEFTQDVPKAGVDPDIASLPTAPKAPEEWEAEGGRPEYNSRGYKERTA-HRDRGYDADADFDDRDWTRKGPLEENDGPGFGAGPERDWGDIRRGPLDSED-AAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAPASRTISDDQXXXXXXXXXXXXXXXXXXXXXXXVRRPIDAGGASSTAEA-DWSARKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRKAIRDIDFSDRRGAKLEELKKAEDVGKLPTEKESSMSRENWRRDTQGVTERRSRQRTHMETSPPRQDTTHNV-----RDWGAARERSHPIEAKMGSPQRAASREGNASQPGSEEVANNELETHAPQDETESDWTTVRSSQRRTPGANRRHSGRGFGRRGPRTSIRDNKGERESRSEFSAREKESHSTDRPLTS 471
            MGK+KPG+GK KVVLSLAEFTQDV  AG D +IA+LPTAPKA EEWEAEGGRPEYNSRGYKER++ HR+R YDAD +F+DRDWTRKGPLEE+ GP FG G ERDWG IRRGPL++E+ AAA XXXXXXXXXXXXXXXXXXXXXXXXX        AE  + RTISD+QXXXXXXXXXXXXXXXXXXXXXXX RRPI+A  ++   E+ DW+AR  XXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXA VR  XXXXXXXXXXXXXXXXXXXXXXXXXXX   KAIRDIDFSD+RG+KL EL+  E + + P +KE+   R+NWRRDT G TER++R   H  +  P   +   +     RDWGAAR RSHP+EA++ SP R    E +A    ++  AN+E      Q + ESDWTTVRS QRR+ G+NRRHSGR F RRG R   RDN  E  SR++FSA+  +S     P+ S
Sbjct:    1 MGKRKPGKGKAKVVLSLAEFTQDVQGAGKDNEIAALPTAPKAAEEWEAEGGRPEYNSRGYKERSSSHRERSYDADVEFEDRDWTRKGPLEESQGPSFGGGAERDWGGIRRGPLEAEEEAAAPXXXXXXXXXXXXXXXXXXXXXXXXXSARKGPIEAEVASGRTISDNQXXXXXXXXXXXXXXXXXXXXXXXXRRPIEAESSTLAPESSDWAARXXXXXXXXAAPTPXXXXXXXXXXXXXXXXXXXXXXXXADVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVGKAIRDIDFSDKRGSKLLELENKE-LEEDPVKKEA---RDNWRRDTPGDTERKTR---HYGSRIPNSSSQEQLPVRKERDWGAARRRSHPVEARL-SPPRRDMPEKSAEDEEADTSANHEDRHETEQADGESDWTTVRSHQRRSTGSNRRHSGRNFNRRGSRPLERDNANEGMSRADFSAKGDDSSHGPPPMAS 471          
BLAST of Ggra5844.t1 vs. uniprot
Match: A0A2V3ICP3 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP3_9FLOR)

HSP 1 Score: 74.7 bits (182), Expect = 4.360e-12
Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 0
Query:  284 KAIRDIDFSDRRGAKLEELKKAEDVGKLPTEKESSMSRENWRRDTQGVTERRSRQRTHMETSPPRQDTTHNV-----RDWGAARERSHPIEAKMGSPQR 377
            KAIRDIDFSD+RG+KL EL+  E + + P +KE+   R+NWRRDT G TE ++R   H  +  P   +   +     RDWGAAR+RSHP+EA++ SP R
Sbjct:   62 KAIRDIDFSDKRGSKLLELENKE-LEQDPVKKEA---RDNWRRDTLGDTEHKTR---HFGSRIPNSSSQEQLPVEKERDWGAARQRSHPVEARL-SPLR 152          
BLAST of Ggra5844.t1 vs. uniprot
Match: A0A2V3IXB7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB7_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 1.400e-11
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0
Query:  284 KAIRDIDFSDRRGAKLEELKKAEDVGKLPTEKESSMSRENWRRDTQGVTERRSRQRTHMETSPPRQDTTHNVR-----DWGAARERSHPIEAKMGSPQR 377
            KAIRDIDFSD+RG+KL EL+  E + + P +KE+   RENW RDT G TE ++R   H  +  P   +   +      DWGAAR RSHPIEA++  P+R
Sbjct:   59 KAIRDIDFSDKRGSKLLELENKE-LEQDPVKKEA---RENWPRDTPGDTELKTR---HFGSRIPNSSSQEQLPVEKEGDWGAARRRSHPIEARLSPPRR 150          
BLAST of Ggra5844.t1 vs. uniprot
Match: A0A2V3ICN2 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICN2_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 9.000e-8
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  408 ESDWTTVRSSQRRTPGANRRHSGRGFGRRGPRTSIRDNKGERESRSEFSAREKESHSTDRPLTS 471
            ESDWTTVRS QRR+ G+NR HSGR F RRG R   RDN  E+ SR++FSA+  +S     P+ S
Sbjct:   29 ESDWTTVRSRQRRSTGSNRLHSGRNFNRRGSRPLGRDNVNEKMSRADFSAKGDDSSHGPPPMAS 92          
The following BLAST results are available for this feature:
BLAST of Ggra5844.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3422.930e-9365.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICP34.360e-1249.49Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IXB71.400e-1148.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICN29.000e-856.25Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:119111..120541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5844.t1Ggra5844.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 119111..120541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5844.t1 ID=Ggra5844.t1|Name=Ggra5844.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=477bp
MGKKKPGQGKKKVVLSLAEFTQDVPKAGVDPDIASLPTAPKAPEEWEAEG
GRPEYNSRGYKERTAHRDRGYDADADFDDRDWTRKGPLEENDGPGFGAGP
ERDWGDIRRGPLDSEDAAAPERNWDGMRRGPVESSFESKHVERDWGARKG
PIEAEAPASRTISDDQWGSARQGPIEAEFRQQKEEPNWNVRRPIDAGGAS
STAEADWSARKGPVEAEFAAETQERDWTARKGPVEADTEKSQPEGDWAGV
RRRPVESTFPRQQPEVDWSARKGPIEPEVEKTRKAIRDIDFSDRRGAKLE
ELKKAEDVGKLPTEKESSMSRENWRRDTQGVTERRSRQRTHMETSPPRQD
TTHNVRDWGAARERSHPIEAKMGSPQRAASREGNASQPGSEEVANNELET
HAPQDETESDWTTVRSSQRRTPGANRRHSGRGFGRRGPRTSIRDNKGERE
SRSEFSAREKESHSTDRPLTSTVTDE*
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